CX288720

Overview
NameCX288720
Unique NameCX288720
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length561
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:373..933. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.933e-42
Identity = 90/174 (51.72%), Postives = 114/174 (65.52%), Query Frame = 3
Query:   21 ETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 521
            E  K KFE LCK++K++L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E L ++ADA+KNDK+VKD           +SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  555 EESKAKFETLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKADANKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVIAEESSIAPPDEIPPLE---GDEDTSRMEEVD 725          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.933e-42
Identity = 90/172 (52.33%), Postives = 112/172 (65.12%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKME 512
            +E  K KFE LCK++KD+L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E L ++A+ADKNDKSVKD           +SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+ME
Sbjct:  551 QEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLE---GDDDTSRME 719          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.322e-41
Identity = 88/174 (50.57%), Postives = 112/174 (64.37%), Query Frame = 3
Query:   21 ETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 521
            E  KEKFE LCK++K++L                PCC+VT  YGWTANME+IMKAQALRDNS  GYM +KK +EINP++PIME L ++A+ADKNDK+VKD           +SGFSL+DP T  N I+ M+KLGL  +ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  427 EESKEKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMEQIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNHIYHMIKLGLGTDEDEVAAEEPSDAVPDEIPPLE---GDEDASRMEEVD 597          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.945e-41
Identity = 91/168 (54.17%), Postives = 109/168 (64.88%), Query Frame = 3
Query:   21 ETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDA-EGSKMEEVD 521
            E LK +FE L K+IK+VL                PC LVT E+GW+ANMERIMKAQALRDNSM  YM SKKTME+N  + IM E+  +A  DK+DK+VKD           TSGFSL++P  F  RIHRM+KLGLSI++D    D D+PPLE+    A E SKMEEVD
Sbjct:  546 EELKAEFEPLLKLIKEVLHDKVDKVVLSNRITDSPCVLVTTEFGWSANMERIMKAQALRDNSMTSYMVSKKTMEVNGHHSIMIEIKNKAAVDKSDKTVKDLIWLLYDTALLTSGFSLEEPTQFAARIHRMIKLGLSIDDDEEAKDDDLPPLEEVEGAADEASKMEEVD 713          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 5.023e-41
Identity = 91/168 (54.17%), Postives = 111/168 (66.07%), Query Frame = 3
Query:   21 ETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 521
            E LKE+ E LCK IK+VL                PC LVT E+GW+ANMERIMKAQALRD+S+  YM SKK MEINP + IM+EL  RA  DK DK+VKD           TSGF+LD+P  FGNRI+RM+KLGLS+ +E+  + D+ MPPL++   D   SKMEEVD
Sbjct:  557 EALKEEMEPLCKHIKEVLHDKVEKVVCGTRFTDSPCALVTSEFGWSANMERIMKAQALRDSSITSYMLSKKIMEINPRHSIMKELKTRAANDKTDKTVKDLVWLLYDTALLTSGFNLDEPTQFGNRIYRMIKLGLSLDDEEHVEEDSSMPPLDEPVVD---SKMEEVD 721          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 5.023e-41
Identity = 91/182 (50.00%), Postives = 113/182 (62.09%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEED--------------AGDADADMPPLEDAADDAEGSKMEEVD 521
            +E  K KFE LCKV+K VL                PCC+VT +YGW+ANMERIMKAQALRD+S  GYM+ KK +EINP++ I+E L +RA+ADKNDK+VKD           +SGFSLD+P T  +RI+RM+KLGL I+ED              A  A  D PPL D ++D   S MEEVD
Sbjct:  541 REEDKAKFENLCKVMKSVLESKVEKVMVSNRLVDSPCCIVTSQYGWSANMERIMKAQALRDSSAMGYMAGKKHLEINPDHAIIETLRQRAEADKNDKAVKDLVILLFETALLSSGFSLDEPGTHASRIYRMIKLGLGIDEDEPMTTEESSSGAAAAAPASGDAPPLVDDSEDL--SHMEEVD 720          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.560e-41
Identity = 91/168 (54.17%), Postives = 111/168 (66.07%), Query Frame = 3
Query:   21 ETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 521
            E LKE+ E LCK IK+VL                PC LVT E+GW+ANMERIMKAQALRD+S+  YM SKK MEINP + IM+EL  RA  DK DK+VKD           TSGF+LD+P  FGNRI+RM+KLGLS+ +E+  + D+ MPPL++   D   SKMEEVD
Sbjct:  558 EALKEEMEPLCKHIKEVLHDKVEKVVCGTRFTDSPCALVTSEFGWSANMERIMKAQALRDSSITSYMLSKKIMEINPRHSIMKELKARAANDKTDKTVKDLVWLLYDTALLTSGFNLDEPTQFGNRIYRMIKLGLSLDDEEHVEDDSSMPPLDEPVVD---SKMEEVD 722          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.237e-39
Identity = 86/173 (49.71%), Postives = 112/173 (64.74%), Query Frame = 3
Query:   30 KEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEED---------AGDADADMPPLEDAADDAEGSKMEEVD 521
            K KFE LCKV+KD+L                PCC+VT EYGW+ANMERIMKAQALRD+S  GYM++KK +EINP++ +++ L +R +ADKNDK+VKD           +SGFSL+DP    +RI+RM+KLGL I ED         +G+ D  +P L  A +DA  S+MEEVD
Sbjct:  547 KVKFENLCKVMKDILEKKVEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSVIKALRERVEADKNDKTVKDLVVLLFETALLSSGFSLEDPQLHASRIYRMIKLGLDITEDEEEEAIASVSGEKDECVPNLVGAEEDA--SRMEEVD 717          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.237e-39
Identity = 85/174 (48.85%), Postives = 110/174 (63.22%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDA------GDADADMPPLEDAADDAEGSKMEEVD 521
            +E  K KFEGLCK++K +L                PCC+VT ++GW+ANMERIMKAQALRD +  GYM+ KK +EINP++PI+E L ++ADADKNDK+VKD           +SGFSLD P    +RI+RM+KLGL I+ED         +  D P L +  +DA  S MEEVD
Sbjct:  546 REEDKAKFEGLCKLMKSILDSKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVEALRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGIDEDEPMTTEDAHSGGDAPGLVEDTEDA--SHMEEVD 717          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.110e-39
Identity = 84/169 (49.70%), Postives = 111/169 (65.68%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 521
            +E  K  +E LCK +KDVLG               PC LVT E+GW+A+ME+IM+ QALRD+SM+ YM SKKTMEINP +PI++EL +R +AD+NDK+VKD           TSGF+LDDP ++  RIHRM+KLGLS+ +ED G+ +A+      A   A  S ME+VD
Sbjct:  536 REEEKTAYERLCKAMKDVLGDKVEKVVVSERLATSPCILVTSEFGWSAHMEQIMRNQALRDSSMSAYMMSKKTMEINPAHPIVKELKRRVEADENDKAVKDLVYLLFDTALLTSGFTLDDPTSYAERIHRMIKLGLSLDDEDNGNEEAEPAAAVPAEPVAGTSSMEQVD 704          
The following BLAST results are available for this feature:
BLAST of CX288720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
HS90B_CHICK5.933e-4251.72Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
HS90A_HORSE5.933e-4252.33Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
H90B3_HUMAN1.322e-4150.57Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
HSP90_EIMTE2.945e-4154.17Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HSP90_THEPA5.023e-4154.17Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP83_ANOGA5.023e-4150.00Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
HSP90_THEAN6.560e-4154.17Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP90_BRUPA1.237e-3949.71Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP83_DROPS1.237e-3948.85Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP85_TRYCR2.110e-3949.70Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]

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Properties
Property NameValue
Genbank descriptionC02003F05SK IF1 Citrus clementina cDNA clone C02003F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288720 ID=CX288720; Name=CX288720; organism=Citrus clementina; type=EST; length=561bp
ATTCGGCACGAGGGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTC
TGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGT
GTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATG
GATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGAC
AACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCC
GGAGAACCCCATCATGGAGGAGCTCANGAAGAGGGCTGATGCGGACAAGA
ATGACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTC
CTCACTTCTGGTTTCAGCCTTGATGACCCTAACACTTTCGGCAACAGAAT
CCACAGGATGTTGAAACTCGGGCTGAGCATCGAGGAGGATGCTGGTGATG
CTGATGCTGACATGCCACCATTGGAGGATGCTGCTGACGATGCTGAGGGC
AGCAAGATGGAGGAAGTTGATTAAGAAGCTATAATAGTCTGATATACTAG
TCTTTTTTTCA
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