CX288720

Overview
NameCX288720
Unique NameCX288720
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length561
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:373..933. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 9.517e-24
Identity = 65/176 (36.93%), Postives = 95/176 (53.98%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAL---RDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG-DADADMPP---LEDAADDAEGSKMEEVD 521
            +E ++++FE L   +KD  L                PC LV  +YGW+ NMERIMKAQA    +D S   Y S KKT EINP +P+++++ +R   D++DK+V D            SG+ L D   +G+RI RML+L L+I+ DA  + + +  P    ED  +D E    EE+D
Sbjct:  608 REAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPDAKVEEEPEEEPEETTEDTTEDTEQDDEEEMD 783          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: ENPL_PONAB (Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.120e-23
Identity = 65/176 (36.93%), Postives = 95/176 (53.98%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAL---RDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG-DADADMPP---LEDAADDAEGSKMEEVD 521
            +E ++++FE L   +KD  L                PC LV  +YGW+ NMERIMKAQA    +D S   Y S KKT EINP +P++ ++ +R   D++DK+V D            SG+ L D   +G+RI RML+L L+I+ DA  + + +  P    ED  +D E  + EE+D
Sbjct:  608 REAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRIKEDEDDKTVLDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPDAKVEEEPEEEPEETTEDTTEDTEQDEDEEMD 783          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: ENPL_PIG (Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 2.120e-23
Identity = 65/176 (36.93%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAL---RDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG-DADADMPP---LEDAADDAEGSKMEEVD 521
            +E ++++FE L   +KD  L                PC LV  +YGW+ NMERIMKAQA    +D S   Y S KKT EINP +P++ ++ +R   D++DK+V D            SG+ L D   +G+RI RML+L L+I+ DA  + + +  P    ED  +D E    EE+D
Sbjct:  608 REAVEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPDAKVEEEPEEEPEETTEDTTEDTEQDDDEEMD 783          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: ENPL_MESAU (Endoplasmin (Fragment) OS=Mesocricetus auratus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.120e-23
Identity = 63/172 (36.63%), Postives = 90/172 (52.33%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAL---RDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 521
            +E  +++FE L   +KD  L                PC LV  +YGW+ NMERIMKAQA    +D S   Y S KKT EINP +P++ ++ +R   D++DK+V D            SG+ L D   + +RI RML+L L+I+ +A   +      ED  +D E  + EEVD
Sbjct:  205 REATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRVKEDEDDKTVLDLAVVLFETATLRSGYLLPDTKAYADRIERMLRLSLNIDPEAQVEEEPEEEPEDTTEDTEQDEEEEVD 376          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: ENPL_MACFA (Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.120e-23
Identity = 66/176 (37.50%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAL---RDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDA--GDADADMP--PLEDAADDAEGSKMEEVD 521
            +E ++++FE L   +KD  L                PC LV  +YGW+ NMERIMKAQA    +D S   Y S KKT EINP +P++ ++ +R   D++DK+V D            SG+ L D   +G+RI RML+L L+I+ DA   D   + P    ED  +D E  + EE+D
Sbjct:  608 REAVEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRIKEDEDDKTVLDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPDAKVEDEPEEEPEETTEDTTEDTEQDEDEEMD 783          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: ENPL_HUMAN (Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.769e-23
Identity = 63/171 (36.84%), Postives = 93/171 (54.39%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAL---RDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG-DADADMPPLEDAADDAEGSKMEE 515
            +E ++++FE L   +KD  L                PC LV  +YGW+ NMERIMKAQA    +D S   Y S KKT EINP +P++ ++ +R   D++DK+V D            SG+ L D   +G+RI RML+L L+I+ DA  + + +  P E A D  E ++ +E
Sbjct:  608 REAVEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRIKEDEDDKTVLDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPDAKVEEEPEEEPEETAEDTTEDTEQDE 778          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 3.061e-22
Identity = 65/176 (36.93%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAL---RDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG-DADADMPP---LEDAADDAEGSKMEEVD 521
            +E  +++FE L   +KD  L                PC LV  +YGW+ NMERIMKAQA    +D S   Y S KKT EINP +P++ ++ +R   D++DK+V D            SG+ L D   +G+RI RML+L L+I+ +A  + + +  P    ED  DD+E  + EE D
Sbjct:  608 REATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRVKEDEDDKTVMDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPEAQVEEEPEEEPEDTTEDTTDDSEQDE-EETD 782          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.998e-22
Identity = 62/171 (36.26%), Postives = 92/171 (53.80%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDA---GDADADMPPLEDAADDAEGSKMEEVD 521
            +E  ++++EGL K ++++LG               PC + TG++GW+ANMERIMKAQALRD SM+   SS+ T                   + ND++VK             SGF++++P+ F  RIH+++ LGL+I+EDA    + +AD    E  AD    S MEEVD
Sbjct:  532 REAEEKEYEGLAKSLENILGDKVEKVVVSHKLIGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSRRSSRPT-------------------EGNDRTVKSITQLLFETSLLVSGFTIEEPSGFAGRIHKLVSLGLNIDEDAETSEEKEADTVVAEAPAD----SDMEEVD 679          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.592e-21
Identity = 55/131 (41.98%), Postives = 79/131 (60.31%), Query Frame = 3
Query:  123 PCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEE 515
            PC +VT ++GW+ANMERIM++Q L D +   YM  K+ +EINP +PI++EL  R  +D  D+SVK+            SGF L DP  F  RI+  +K GL+I  DA  AD ++    +AA++ E S+  E
Sbjct:  670 PCVVVTSKFGWSANMERIMQSQTLSDANKQAYMRGKRVLEINPRHPIIKELKDRIASDPEDESVKETAQLMYQTALIESGFILTDPKDFAARIYNSVKSGLNISPDA-VADEEI----EAAEEPETSEATE 795          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.541e-21
Identity = 60/169 (35.50%), Postives = 86/169 (50.89%), Query Frame = 3
Query:   27 LKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXX-PCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI--------EEDAGDADADMPPLEDAADDAEGSK 506
            LKE F+ L K  K  L                 PC +VT +YGW++NMERIM++Q L D S   YM  K+ +EINP +PI++EL +R   D  D+SVK             SGF L+DP  F + I+  +K  L I        E+D  +A+A+    E +A +  G++
Sbjct:  641 LKESFKELTKWWKGALASENVDDVKISNRLANTPCVVVTSKYGWSSNMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDAEDESVKQTARLMYQTALMESGFMLNDPKEFASSIYDSVKSSLKISPDATVEEEDDTEEAEAESGTTESSAAEDAGAE 809          
The following BLAST results are available for this feature:
BLAST of CX288720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ENPL_CANFA9.517e-2436.93Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]
ENPL_PONAB2.120e-2336.93Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1[more]
ENPL_PIG2.120e-2336.93Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3[more]
ENPL_MESAU2.120e-2336.63Endoplasmin (Fragment) OS=Mesocricetus auratus GN=... [more]
ENPL_MACFA2.120e-2337.50Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2... [more]
ENPL_HUMAN2.769e-2336.84Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1[more]
ENPL_RAT3.061e-2236.93Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
HSP82_AJECA3.998e-2236.26Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
ENPL_ARATH2.592e-2141.98Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_CATRO7.541e-2135.50Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]

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Properties
Property NameValue
Genbank descriptionC02003F05SK IF1 Citrus clementina cDNA clone C02003F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288720 ID=CX288720; Name=CX288720; organism=Citrus clementina; type=EST; length=561bp
ATTCGGCACGAGGGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTC
TGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGT
GTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATG
GATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGAC
AACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCC
GGAGAACCCCATCATGGAGGAGCTCANGAAGAGGGCTGATGCGGACAAGA
ATGACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTC
CTCACTTCTGGTTTCAGCCTTGATGACCCTAACACTTTCGGCAACAGAAT
CCACAGGATGTTGAAACTCGGGCTGAGCATCGAGGAGGATGCTGGTGATG
CTGATGCTGACATGCCACCATTGGAGGATGCTGCTGACGATGCTGAGGGC
AGCAAGATGGAGGAAGTTGATTAAGAAGCTATAATAGTCTGATATACTAG
TCTTTTTTTCA
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