CX288721

Overview
NameCX288721
Unique NameCX288721
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP323_ARATH (Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 9.185e-49
Identity = 88/188 (46.81%), Postives = 128/188 (68.09%), Query Frame = 3
Query:   21 CRSDNIAE-SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            C+ DN+   + LID+Y+KCG++  AR +FD    K    W +MIA Y  +G   ++L LF +M++   KP+H+TFLA++ AC H+G +E G  YFH M + Y I   ++HY+CMVDL GR G+L +ALE I +M   PDAG+WG LL AC++H NV++AE A+  LF+L+PQ +  YV ++NI+A AG
Sbjct:  388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAG 575          

HSP 2 Score: 78.9518 bits (193), Expect = 1.933e-14
Identity = 50/173 (28.90%), Postives = 84/173 (48.55%), Query Frame = 3
Query:   39 AESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYAC----------MVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLD 527
            A +  I +Y+K  +   AR +FD+M  +   +W  MI+ Y   G + ++LALFH M+ +  KPD VT L++IS CG  G +E G            I AR + Y C          ++D++ + G +++A +  ++ P       W T++    ++G    A    S + DLD
Sbjct:  293 AINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG----------KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454          

HSP 3 Score: 70.4774 bits (171), Expect = 6.875e-12
Identity = 39/159 (24.53%), Postives = 74/159 (46.54%), Query Frame = 3
Query:    6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGV-WGTLLGACRVHG 479
            +IK    SD    +  +D++ KC ++D+A  VF+ M  +    WN+M++ +   GH   + +LF EM  N+I PD VT + +I +      ++  +   H +    G+  ++      +  +G+ G L+ A     ++       V W ++  A  V G
Sbjct:   78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKL-LEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP223_ARATH (Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.953e-48
Identity = 85/175 (48.57%), Postives = 119/175 (68.00%), Query Frame = 3
Query:   54 IDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADA 578
            I +YA+CGNL  AR VFD+M  K   +W +MI  YG HG  +  L LF +M+   I+PD   F+ ++SAC H+G  + G+  F  M  EY +    EHY+C+VDL GRAGRL++A+E I SMP  PD  VWG LLGAC++H NV++AE+A + + + +P N GYYVL+SNI++D+
Sbjct:  299 ISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDS 473          

HSP 2 Score: 76.6406 bits (187), Expect = 9.593e-14
Identity = 44/161 (27.33%), Postives = 77/161 (47.83%), Query Frame = 3
Query:    9 IKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVEL 491
            +K    S+    +  I +Y KCG+++  R +FD M  K    WN++I+ Y  +G   D L L+ +M ++ + PD  T ++++S+C H G  + G H    + E  G    +      + ++ R G L KA    + MP       W  ++G   +HG  E+
Sbjct:  183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG-HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP-VKSLVSWTAMIGCYGMHGMGEI 341          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.015e-47
Identity = 87/178 (48.88%), Postives = 123/178 (69.10%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADA 578
            S L+ +Y +CG L+  + VFD M  +   +WNS+I++YG HG+ K ++ +F EML N   P  VTF++++ AC H G VE G   F  M  ++GI  ++EHYACMVDL GRA RL++A + +  M   P   VWG+LLG+CR+HGNVELAE AS  LF L+P+N+G YVLL++I+A+A
Sbjct:  324 SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEA 501          

HSP 2 Score: 70.0922 bits (170), Expect = 8.979e-12
Identity = 41/147 (27.89%), Postives = 73/147 (49.66%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEML--NNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHG 479
            + L+D+YA+ G +D+A  VF  M  +   +W++MIA Y  +G   ++L  F EM+       P+ VT ++++ AC     +E G    H      G+ + +   + +V ++GR G+L       + M    D   W +L+ +  VHG
Sbjct:  221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVHG 365          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 2.955e-47
Identity = 86/193 (44.56%), Postives = 129/193 (66.84%), Query Frame = 3
Query:    6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVH-GNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            +IK   +SD    S L+D+Y+KCG+L  +R +F+   R+    WN+MI  Y  HG  ++++ LF  M+   IKP+HVTF++I+ AC H G ++ G+ YF+ M  +YG+  ++ HY+ MVD+ G++G++ +ALE I  MPF  D  +W TLLG C +H  NVE+AE A++ L  LDPQ+S  Y LLSN++ADAG
Sbjct:  629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAG 821          

HSP 2 Score: 77.0258 bits (188), Expect = 7.345e-14
Identity = 56/169 (33.14%), Postives = 88/169 (52.07%), Query Frame = 3
Query:    3 LMIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASS 509
            L IK S   D    +  ID+Y KC  L  A  VFD M R+   +WN++IAA+  +G   ++L LF  ML ++I+PD  TF +I+ AC   G +  G+   H    + G+ +       ++D++ + G + +A E I+S  F   A V GT+    ++H N  L E+  S
Sbjct:  407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGME-IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA-EKIHSR-FFQRANVSGTMEELEKMH-NKRLQEMCVS 570          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP229_ARATH (Pentatricopeptide repeat-containing protein At3g14330 OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.123e-46
Identity = 78/176 (44.32%), Postives = 123/176 (69.89%), Query Frame = 3
Query:   51 LIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADA 578
            L+D+Y KCG ++++R VFD+M  K  A+WN M+  Y  +G++++ + LF  M+ + + PD +TF+A++S C   G  E G+  F  M  E+ +   +EHYAC+VD+ GRAG++ +A++ I +MPF P A +WG+LL +CR+HGNV + E+A+  LF L+P N G YV++SNI+ADA
Sbjct:  378 LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADA 553          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.572e-46
Identity = 83/176 (47.16%), Postives = 117/176 (66.48%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHA 572
            + LI++YAKCG LD  R VF+ M R+   +W+SMI A   HG   D+L+LF  M    ++P+ VTF+ ++  C H+G VE G   F  MT+EY I  ++EHY CMVDLFGRA  L +ALE I SMP A +  +WG+L+ ACR+HG +EL + A+  + +L+P + G  VL+SNI+A
Sbjct:  383 NALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYA 558          

HSP 2 Score: 79.337 bits (194), Expect = 1.480e-14
Identity = 39/145 (26.90%), Postives = 77/145 (53.10%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHG 479
            + ++  Y+KCG LD A+ +FD   +K    W +MI+AY    + +++L +F EM  + IKPD V+  ++ISAC + G ++    + H      G+ + +     +++++ + G L+   +    MP   +   W +++ A  +HG
Sbjct:  282 TAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHG 424          

HSP 3 Score: 75.485 bits (184), Expect = 2.137e-13
Identity = 40/132 (30.30%), Postives = 66/132 (50.00%), Query Frame = 3
Query:   30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHY--ACMVDLFGRAGRLNKALETINSM 419
            D   E+  +D+YA CG +++AR VFD M  +    WN+MI  Y   G + ++  LF EM ++ + PD +    I+SACG  G +      +  + E      RM+ +    +V ++  AG ++ A E    M
Sbjct:  145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN---DVRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.572e-46
Identity = 83/177 (46.89%), Postives = 117/177 (66.10%), Query Frame = 3
Query:   51 LIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            LID+Y KCG ++    VF  M  +   +WN+MI  +  +G+  ++L LF EML +  KPDH+T + ++SACGHAG VE G HYF  MT ++G+    +HY CMVDL GRAG L +A   I  MP  PD+ +WG+LL AC+VH N+ L +  +  L +++P NSG YVLLSN++A+ G
Sbjct:  433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609          

HSP 2 Score: 81.6481 bits (200), Expect = 2.982e-15
Identity = 42/140 (30.00%), Postives = 75/140 (53.57%), Query Frame = 3
Query:    3 LMIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMP 422
            L+ K    SD    S L+D+Y+KCGN++ A+ VFD M  +   +WNS+I  +  +G   ++L +F  ML ++++PD VT  ++ISAC     ++ G      + +   +   +      VD++ +  R+ +A    +SMP
Sbjct:  177 LIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 9.505e-46
Identity = 87/180 (48.33%), Postives = 118/180 (65.56%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNN-KIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            S LID+Y+KCGN++ A  VF  M  K    ++SMI     HG  +++L LFH M+   +IKP+ VTF+  + AC H+G V+ G   F  M + +G+    +HY CMVDL GR GRL +ALE I +M   P  GVWG LLGACR+H N E+AE+A+ HLF+L+P   G Y+LLSN++A AG
Sbjct:  322 SALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAG 501          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.621e-45
Identity = 87/182 (47.80%), Postives = 121/182 (66.48%), Query Frame = 3
Query:   36 IAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            + E+ LID+YAKCG L+ AR VF+ M  +   +W +MI+AYG  G   D++ALF ++ ++ + PD + F+  ++AC HAG +E G   F  MT+ Y I  R+EH ACMVDL GRAG++ +A   I  M   P+  VWG LLGACRVH + ++  +A+  LF L P+ SGYYVLLSNI+A AG
Sbjct:  345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAG 526          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 2.117e-45
Identity = 82/192 (42.71%), Postives = 128/192 (66.67%), Query Frame = 3
Query:    9 IKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMP-FAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            IK++  +D    S L+D+YAKCG L  +R VFD + +K    WN +I AYG HG+ ++++ L   M+   +KP+ VTF+++ +AC H+G V+ G+  F+ M  +YG+    +HYAC+VDL GRAGR+ +A + +N MP     AG W +LLGA R+H N+E+ E+A+ +L  L+P  + +YVLL+NI++ AG
Sbjct:  544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 735          

HSP 2 Score: 70.0922 bits (170), Expect = 8.979e-12
Identity = 39/170 (22.94%), Postives = 78/170 (45.88%), Query Frame = 3
Query:    6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNK-----------IKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGN 482
            ++K     D   ++ L+D+Y++ G +D A  +F  M  +    WN+MI  Y    H +D+L L H+M N +           +KP+ +T + I+ +C     +  G    H    +  +   +   + +VD++ + G L  + +  + +P   +   W  ++ A  +HGN
Sbjct:  431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598          
The following BLAST results are available for this feature:
BLAST of CX288721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
PP323_ARATH9.185e-4946.81Pentatricopeptide repeat-containing protein At4g19... [more]
PP223_ARATH5.953e-4848.57Putative pentatricopeptide repeat-containing prote... [more]
PP265_ARATH1.015e-4748.88Pentatricopeptide repeat-containing protein At3g46... [more]
PP207_ARATH2.955e-4744.56Pentatricopeptide repeat-containing protein At3g02... [more]
PP229_ARATH1.123e-4644.32Pentatricopeptide repeat-containing protein At3g14... [more]
PP311_ARATH5.572e-4647.16Pentatricopeptide repeat-containing protein At4g14... [more]
PP151_ARATH5.572e-4646.89Pentatricopeptide repeat-containing protein At2g13... [more]
PP417_ARATH9.505e-4648.33Pentatricopeptide repeat-containing protein At5g44... [more]
PP271_ARATH1.621e-4547.80Putative pentatricopeptide repeat-containing prote... [more]
PP285_ARATH2.117e-4542.71Pentatricopeptide repeat-containing protein At3g57... [more]

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Properties
Property NameValue
Genbank descriptionC02003F06SK IF1 Citrus clementina cDNA clone C02003F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288721 ID=CX288721; Name=CX288721; organism=Citrus clementina; type=EST; length=581bp
GTTTGATGATAAAAGATTCCTGCCGCTCTGATAATATTGCTGAGAGTGTA
CTGATAGACTTGTATGCTAAATGTGGAAACTTGGATTTTGCTCGTACTGT
TTTTGACATGATGCANAGGAAGCAGGAAGCTGCATGGAATAGCATGATTG
CTGCTTATGGATGCCACGGCCATCTNAAGGACTCTCTTGCTCTTTTCCAT
GAAATGTTAAATAATAAAATCAAGCCAGATCATGTCACGTTTCTCGCTAT
AATATCTGCTTGTGGCCATGCTGGCCAAGTTGAAGCTGGAATTCATTACT
TCCATTGTATGACTGAAGAATATGGAATCCCAGCTCGCATGGAGCACTAT
GCATGCATGGTAGATTTGTTTGGGCGTGCTGGTCGTTTGAATAAGGCATT
AGAGACCATAAACAGTATGCCATTTGCACCTGATGCAGGTGTCTGGGGAA
CGTTGCTGGGAGCATGTCGGGTCCATGGCAATGTTGAGCTAGCTGAAGTG
GCTTCAAGTCATCTGTTTGATTTAGACCCACAAAACTCAGGCTACTATGT
GCTGCTTTCAAATATACATGCTGATGCTGGA
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