CX288721

Overview
NameCX288721
Unique NameCX288721
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP197_ARATH (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.967e-40
Identity = 83/185 (44.86%), Postives = 109/185 (58.92%), Query Frame = 3
Query:   27 SDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            SD   ++ LID+Y KCG   +A  +F  M  K    WN MI  YG HG    +L+LF EM      PD VTFL++ISAC H+G VE G + F  M ++YGI   MEHYA MVDL GRAG L +A   I +MP   D+ +W  LL A R H NVEL  +++  L  ++P+    YV L N++ +AG
Sbjct:  610 SDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAG 794          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.793e-40
Identity = 76/179 (42.46%), Postives = 103/179 (57.54%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            + L+D YAKCG+   AR +FD +  K    W++MI  YG  G    SL LF EML  + KP+  TF +I+SACGH G V  G  YF  M ++Y      +HY CMVD+  RAG L +AL+ I  MP  PD   +G  L  C +H   +L E+    + DL P ++ YYVL+SN++A  G
Sbjct:  484 TALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDG 662          

HSP 2 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 41/155 (26.45%), Postives = 72/155 (46.45%), Query Frame = 3
Query:   30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELA 494
            DN+  + L+D+YAKCG +  A  VF+ +  +    W SMIA Y  +   ++ L LF+ M  N +  +  T+  +I AC     +  G  +FH    + GI         ++D++ + G ++ A    N      D  +W  ++     +G+V  A
Sbjct:  175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQG-KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV-DLVMWTAMIVGYTHNGSVNEA 327          

HSP 3 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 46/175 (26.29%), Postives = 81/175 (46.29%), Query Frame = 3
Query:    3 LMIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHY--ACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFD 521
            L IK      N+A + L+ +YAKC     A+ VF+M   K   AWNS+I+ +  +G + ++L LFH M +  + P+ VT  ++ SAC   G +  G    H  + + G  A    +    ++D + + G    A    +++    +   W  ++G     G+     + S  LF+
Sbjct:  368 LSIKVGIWDTNVANA-LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG-SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGGYGKQGDT----IGSLELFE 535          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PPR15_ARATH (Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.018e-39
Identity = 75/177 (42.37%), Postives = 116/177 (65.54%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHAD 575
            S L+D+Y+KCG+L+ A  VF  + +K    WNS+I     HG  +++L +F +M    +KP+ VTF+++ +AC HAG V+ G   +  M ++Y I + +EHY  MV LF +AG + +ALE I +M F P+A +WG LL  CR+H N+ +AE+A + L  L+P NSGYY LL +++A+
Sbjct:  326 SALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAE 502          

HSP 2 Score: 78.1814 bits (191), Expect = 3.297e-14
Identity = 43/143 (30.07%), Postives = 75/143 (52.45%), Query Frame = 3
Query:   51 LIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHG 479
            LI+ Y   GNL+ A ++F+ M  K   +W +MI  Y  +   ++++A+F++M+   I PD VT   +ISAC H G +E G    H  T + G    +   + +VD++ + G L +AL    ++P   +   W +++     HG
Sbjct:  227 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIG-KEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAHG 367          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.329e-39
Identity = 74/176 (42.05%), Postives = 110/176 (62.50%), Query Frame = 3
Query:   51 LIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADA 578
            L+D+YAKCGN+  A +VF  +  +    + ++I     HG    +++ F+EM++  I PD +TF+ ++SAC H G ++ G  YF  M   + +  +++HY+ MVDL GRAG L +A   + SMP   DA VWG LL  CR+HGNVEL E A+  L +LDP +SG YVLL  ++ +A
Sbjct:  430 LVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEA 605          

HSP 2 Score: 87.0409 bits (214), Expect = 7.098e-17
Identity = 50/177 (28.25%), Postives = 90/177 (50.85%), Query Frame = 3
Query:   36 IAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFD--LDPQNSGYYVLLS 560
            ++ + +I  YA+CG LD +R +FD M  K    WN+MI         +D+LALF EM  +  KPD +T +  +SAC   G ++ GI + H   E+Y +   +     +VD++ + G +++AL   + +    ++  +  ++G   +HG+   A    + + D  + P    +  LLS
Sbjct:  324 VSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ-TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLS 498          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP121_ARATH (Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.329e-39
Identity = 77/187 (41.18%), Postives = 113/187 (60.43%), Query Frame = 3
Query:   21 CRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            C   ++  S L+ +Y+K G++D     F  +      AW ++IA+Y  HG   ++L +++ M     KPD VTF+ ++SAC H G VE    + + M ++YGI     HY CMVD  GR+GRL +A   IN+M   PDA VWGTLL AC++HG VEL +VA+    +L+P ++G Y+ LSNI A+ G
Sbjct:  684 CTEPSVGSS-LLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVG 869          

HSP 2 Score: 73.559 bits (179), Expect = 8.121e-13
Identity = 40/138 (28.99%), Postives = 71/138 (51.45%), Query Frame = 3
Query:    9 IKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMP 422
            +K     D    S L  LY+KCG+L+ +  +F  +  K  A W SMI+ +  +G+L++++ LF EML++   PD  T  A+++ C     +  G    H  T   GI   M+  + +V+++ + G L  A +  + +P
Sbjct:  477 LKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRG-KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP378_ARATH (Pentatricopeptide repeat-containing protein At5g13270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.736e-39
Identity = 77/191 (40.31%), Postives = 116/191 (60.73%), Query Frame = 3
Query:    9 IKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            IK S       ES LI +Y+KCG LD A  VF+ M      AW + I+ +  +G+  ++L LF +M++  +KP+ VTF+A+++AC HAG VE G H    M  +Y +   ++HY CM+D++ R+G L++AL+ + +MPF PDA  W   L  C  H N+EL E+A   L  LDP+++  YVL  N++  AG
Sbjct:  414 IKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAG 604          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP345_ARATH (Pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.736e-39
Identity = 74/190 (38.95%), Postives = 118/190 (62.11%), Query Frame = 3
Query:    6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHAD 575
            ++K    S  +  S L+D+YAK GN+D +  VF+ M +K +  W S+I+AY  HG  +  + LFH+M+   + PD VTFL++++AC   G V+ G   F+ M E Y +    EHY+CMVD+ GRAGRL +A E ++ +P  P   +  ++LG+CR+HGNV++    +    ++ P+ SG YV + NI+A+
Sbjct:  500 LLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAE 689          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP114_ARATH (Pentatricopeptide repeat-containing protein At1g71420 OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.736e-39
Identity = 83/193 (43.01%), Postives = 115/193 (59.59%), Query Frame = 3
Query:    6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDL-DPQNSGYYVLLSNIHADAG 581
            +IK    +D +  + LI  YAKCG+LD    VFD M  +   +WNSM+ AY  HG +   L +F +M    I PD  TF+A++SAC HAG+VE G+  F  M E+     ++ HYAC++D+  RA R  +A E I  MP  PDA VW  LLG+CR HGN  L ++A+  L +L +P NS  Y+ +SNI+   G
Sbjct:  395 VIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEG 584          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP128_ARATH (Pentatricopeptide repeat-containing protein At1g77170 OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.268e-39
Identity = 73/193 (37.82%), Postives = 117/193 (60.62%), Query Frame = 3
Query:    3 LMIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            L  K   +SD +  + LID+Y KCG +D A  +F+ M ++   +W+SMI  Y  +G+  ++L  F +M    ++P+ +TF+ ++SAC H G VE G  YF  M  E+ +   + HY C+VDL  R G+L +A + +  MP  P+  VWG L+G C   G+VE+AE  + ++ +L+P N G YV+L+N++A  G
Sbjct:  245 LQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRG 437          

HSP 2 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 38/155 (24.52%), Postives = 73/155 (47.10%), Query Frame = 3
Query:   30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCM----TEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGN 482
            D   ES  I LY K G  + AR VFD    ++  +WN++I      G   +++ +F +M  + ++PD  T +++ ++CG  G +        C+    TEE    + +     ++D++G+ GR++ A      M    +   W +++     +GN
Sbjct:  151 DEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEE---KSDIMMLNSLIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGN 301          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP353_ARATH (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.961e-39
Identity = 72/183 (39.34%), Postives = 114/183 (62.30%), Query Frame = 3
Query:   33 NIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            + A S L+D+Y KCGN++ A+ V D   +    +W S+I     +G   ++L  F  +L +  KPDHVTF+ ++SAC HAG VE G+ +F+ +TE++ +    +HY C+VDL  R+GR  +    I+ MP  P   +W ++LG C  +GN++LAE A+  LF ++P+N   YV ++NI+A AG
Sbjct:  354 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536          

HSP 2 Score: 84.3445 bits (207), Expect = 4.601e-16
Identity = 46/163 (28.22%), Postives = 79/163 (48.47%), Query Frame = 3
Query:    6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELA 494
            +++    SD +  S L+D+Y KCG +D AR +FD +  K   +W SMI  Y      ++  +LF E++ +  +P+  TF  +++AC      E G      MT   G        + +VD++ + G +  A   ++  P  PD   W +L+G C  +G  + A
Sbjct:  244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT-RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEA 404          
The following BLAST results are available for this feature:
BLAST of CX288721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
PP197_ARATH5.967e-4044.86Pentatricopeptide repeat-containing protein At2g40... [more]
PP146_ARATH7.793e-4042.46Pentatricopeptide repeat-containing protein At2g03... [more]
PPR15_ARATH1.018e-3942.37Pentatricopeptide repeat-containing protein At1g06... [more]
PP169_ARATH1.329e-3942.05Pentatricopeptide repeat-containing protein At2g22... [more]
PP121_ARATH1.329e-3941.18Pentatricopeptide repeat-containing protein At1g74... [more]
PP378_ARATH1.736e-3940.31Pentatricopeptide repeat-containing protein At5g13... [more]
PP345_ARATH1.736e-3938.95Pentatricopeptide repeat-containing protein At4g32... [more]
PP114_ARATH1.736e-3943.01Pentatricopeptide repeat-containing protein At1g71... [more]
PP128_ARATH2.268e-3937.82Pentatricopeptide repeat-containing protein At1g77... [more]
PP353_ARATH2.961e-3939.34Pentatricopeptide repeat-containing protein At4g37... [more]

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Properties
Property NameValue
Genbank descriptionC02003F06SK IF1 Citrus clementina cDNA clone C02003F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288721 ID=CX288721; Name=CX288721; organism=Citrus clementina; type=EST; length=581bp
GTTTGATGATAAAAGATTCCTGCCGCTCTGATAATATTGCTGAGAGTGTA
CTGATAGACTTGTATGCTAAATGTGGAAACTTGGATTTTGCTCGTACTGT
TTTTGACATGATGCANAGGAAGCAGGAAGCTGCATGGAATAGCATGATTG
CTGCTTATGGATGCCACGGCCATCTNAAGGACTCTCTTGCTCTTTTCCAT
GAAATGTTAAATAATAAAATCAAGCCAGATCATGTCACGTTTCTCGCTAT
AATATCTGCTTGTGGCCATGCTGGCCAAGTTGAAGCTGGAATTCATTACT
TCCATTGTATGACTGAAGAATATGGAATCCCAGCTCGCATGGAGCACTAT
GCATGCATGGTAGATTTGTTTGGGCGTGCTGGTCGTTTGAATAAGGCATT
AGAGACCATAAACAGTATGCCATTTGCACCTGATGCAGGTGTCTGGGGAA
CGTTGCTGGGAGCATGTCGGGTCCATGGCAATGTTGAGCTAGCTGAAGTG
GCTTCAAGTCATCTGTTTGATTTAGACCCACAAAACTCAGGCTACTATGT
GCTGCTTTCAAATATACATGCTGATGCTGGA
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