CX288730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288730 vs. ExPASy Swiss-Prot
Match: BH007_ARATH (Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.253e-15 Identity = 49/95 (51.58%), Postives = 67/95 (70.53%), Query Frame = 2 Query: 35 SSVKP---AEQNSQP--PEPPKQDYIH--VRARRGQATDSHSLAXRARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 298 SS+KP + SQP P P +Q I VRARRGQATD HS+A R RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ QV+ LSM Sbjct: 115 SSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVLSM 208
BLAST of CX288730 vs. ExPASy Swiss-Prot
Match: UNE12_ARATH (Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.238e-14 Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 35 SSVKPA----EQNSQPPEPPKQDYI---HVRARRGQATDSHSLAXRARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 298 SS+KP PP P Q VRARRGQATD HS+A R RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ QV+ LSM Sbjct: 117 SSMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVLSM 210
BLAST of CX288730 vs. ExPASy Swiss-Prot
Match: PIF1_ARATH (Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.976e-12 Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = 2 Query: 14 SKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRA-------------RRGQATDSHSLAXRARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMNPGIEVFPP 352 SK+E EP ++ + E D R+ +R +A + H+L+ R RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++ +SM + M PG++ + P Sbjct: 236 SKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSMGC-GMMPMMYPGMQQYMP 359
BLAST of CX288730 vs. ExPASy Swiss-Prot
Match: PIF3_ARATH (Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.673e-11 Identity = 36/82 (43.90%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 107 ARRGQATDSHSLAXRARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMNPGIEVFPP 352 ++R ++ + H+L+ R RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ QV+ +SM A + P + +FPP Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQIMSM---ASGYYLPPAV-MFPP 415
BLAST of CX288730 vs. ExPASy Swiss-Prot
Match: BH119_ARATH (Transcription factor bHLH119 OS=Arabidopsis thaliana GN=BHLH119 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.853e-11 Identity = 36/106 (33.96%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 14 SKAEAEPSSVKPAEQNSQPPEPPKQDYI-----------HVRARRGQATDSHSLAXRARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 298 +KAE E ++P + + +++ I +R +A D H+L+ R RRE+I+ERMK LQ+L+P C K K +L+++I Y++SLQ Q++ +SM Sbjct: 311 NKAETERVQIQPERETKITEDKKREETIAEIQGTEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKT-DKVSMLEDVIEYVKSLQLQIQMMSM 415
BLAST of CX288730 vs. ExPASy Swiss-Prot
Match: PIF4_ARATH (Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.356e-11 Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 110 RRGQATDSHSLAXRARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM-----KLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 394 RR +A + H+L+ R RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++ + M A M PG++ P+ F +Q +P Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASAPMMFPGVQ---PQQFIRQIQSPVQLP 349 The following BLAST results are available for this feature:
BLAST of CX288730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288730 ID=CX288730; Name=CX288730; organism=Citrus clementina; type=EST; length=532bpback to top |