CX288736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACC3 (50S ribosomal protein L18 OS=Bacillus cereus (strain 03BB102) GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K R RH+R++ K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQ Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQ 119
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACC1 (50S ribosomal protein L18 OS=Bacillus cereus (strain ATCC 10987) GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K R RH+R++ K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQ Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQ 119
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACAN (50S ribosomal protein L18 OS=Bacillus anthracis GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K R RH+R++ K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQ Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQ 119
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACAC (50S ribosomal protein L18 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K R RH+R++ K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQ Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQ 119
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACAA (50S ribosomal protein L18 OS=Bacillus anthracis (strain A0248) GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K R RH+R++ K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQ Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQ 119
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RK18_CYAPA (50S ribosomal protein L18, cyanelle OS=Cyanophora paradoxa GN=rpl18 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 62/118 (52.54%), Postives = 87/118 (73.73%), Query Frame = 1 Query: 178 TKREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 T+++ RH R+++K+ GT ERPRL VFRS++H+Y Q+IDDT+ TLA++ST++ + + + SS T S VG++IAK LEKGIT+V FDRGG YHGR++ LA+AARE GLQ Sbjct: 4 TRKQATQRRHRRVRRKVFGTSERPRLAVFRSHQHIYAQIIDDTQHRTLAASSTLEPSVKNS-ELSSTSTCAASAIVGQLIAKKALEKGITQVVFDRGGKIYHGRVRTLAEAAREAGLQ 120
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_MICAN (50S ribosomal protein L18 OS=Microcystis aeruginosa (strain NIES-843) GN=rplR PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.963e-29 Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 178 TKREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGL 528 +++E RH R+++KI+GT ERPRL VFRSN H+Y Q+IDD HTLA+AST++ + EL+ S T E S VG+++A+ L+KGI +V FDRGG YHGR++ALA+AAR GL Sbjct: 4 SRKESVRRRHQRVRRKINGTAERPRLSVFRSNNHIYAQIIDDVAQHTLAAASTLEATLRGELE--STATQEASAAVGKLVAQRALDKGIEQVVFDRGGNLYHGRVKALAEAARSAGL 118
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_HELMI (50S ribosomal protein L18 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplR PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.175e-29 Identity = 66/113 (58.41%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 193 RTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 R +H RI+K++ GT ERPRLCVFRS H+Y QV++D TL +AS++ + SG IE +KKVGE+IAK LEKGI KV FDRGGY YHGRI ALA+AARE GLQ Sbjct: 11 RQKKHMRIRKRVKGTEERPRLCVFRSLNHIYAQVVNDVTGRTLVAASSLDGEF--KAANVSGGNIEGAKKVGELIAKKALEKGIDKVVFDRGGYIYHGRIAALAEAAREAGLQ 121
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_THELT (50S ribosomal protein L18 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=rplR PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.759e-29 Identity = 65/121 (53.72%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 181 KREDRT----ARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K+EDR RH RI+KK+ GT ERPRL VFRS KH+Y Q+IDDTK HTL SAST+ + + + E +K+VG+++A+ L KGI++V FDRGG+ +HGRI+ LADAARE GL+ Sbjct: 3 KKEDRKFKRIKRHLRIRKKVFGTSERPRLSVFRSEKHIYAQIIDDTKGHTLVSASTLDPDLRARIAKTYNK--EAAKEVGKLVAQKALSKGISQVVFDRGGFKFHGRIRELADAAREAGLK 121
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_CLOBB (50S ribosomal protein L18 OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=rplR PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.759e-29 Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K+ RT RH R++KK+ GTP+RPRL VFRS K++YVQ+IDD T+ +AS++ K E ++G E +K VG +AK +EKGIT+V FDRGGY YHGR+Q LA+ ARE GL+ Sbjct: 7 KKASRTKRHLRVRKKVFGTPDRPRLSVFRSEKNIYVQIIDDVNAVTIVAASSLDK----EFSTNNGGNKEGAKLVGAAVAKKAIEKGITEVVFDRGGYVYHGRVQELAEGAREAGLK 119 The following BLAST results are available for this feature:
BLAST of CX288736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288736 ID=CX288736; Name=CX288736; organism=Citrus clementina; type=EST; length=532bpback to top |