CX288740

Overview
NameCX288740
Unique NameCX288740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11230 contig Ccv1_Contig11230:700..1218. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPKH_ARATH (CBL-interacting serine/threonine-protein kinase 17 OS=Arabidopsis thaliana GN=CIPK17 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.483e-35
Identity = 76/151 (50.33%), Postives = 99/151 (65.56%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFG-------YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFED 432
            NIVR  EV+ + T + +V+E  +GG+LF+RI + G+ SE + R  FQQLI GVSYCH+  V HRDLKLEN LLD      +KI DFG       Y +  +LH    +T G+P Y+APEVL  + YDG  +D+WSCGV LYV+L G  PF+D
Sbjct:   70 NIVRLHEVLASKTKIYMVLECVTGGDLFDRIVSKGKLSETQGRKMFQQLIDGVSYCHNKGVFHRDLKLENVLLDAK--GHIKITDFGLSALSQHYREDGLLH----TTCGSPNYVAPEVLANEGYDGAASDIWSCGVILYVILTGCLPFDD 214          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPKQ_ORYSJ (CBL-interacting protein kinase 26 OS=Oryza sativa subsp. japonica GN=CIPK26 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.940e-35
Identity = 83/173 (47.98%), Postives = 111/173 (64.16%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS-------VLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIP 498
            NI++  EV+ + + +  V+EYA GGELF++I + G+FSED AR +F QLISG+ YCHS  V HRDLK EN LLD + +  LK+ DFG S  S       +LH+    T GTPAY+APEVL ++ YDG  AD+WSCGV L+V++ G  PF D    + +RK    I   +Y  P
Sbjct:   71 NILQLFEVMASKSKIYFVLEYAKGGELFKKI-SKGKFSEDVARRYFHQLISGIDYCHSRGVYHRDLKPENLLLDENES--LKVSDFGLSALSESKRHDGLLHT----TCGTPAYVAPEVLSRRGYDGAKADIWSCGVILFVLVSGYLPFHDTNLIEMYRK----IAKAEYKCP 232          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPKL_ORYSJ (CBL-interacting protein kinase 21 OS=Oryza sativa subsp. japonica GN=CIPK21 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 5.940e-35
Identity = 77/162 (47.53%), Postives = 101/162 (62.35%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 465
            N+VR  EV  + T + +V+EY +GGELF++I   G+ SE E R  FQQL+  VSYCH   V HRDLK EN L+D      +K+ DFG S       K  +LH    +T G+P YIAPEVLL + YDG ++D+WSCGV LYVML G  PF+D      ++K +
Sbjct:  146 NVVRLHEVSASKTKIYMVLEYVNGGELFDKIALKGKLSEKEGRKLFQQLMDAVSYCHEKGVYHRDLKPENVLVDAK--GNIKVSDFGLSALPQNQRKDGLLH----TTCGSPNYIAPEVLLNRGYDGSLSDIWSCGVILYVMLTGNLPFDDQNTVVLYQKIL 301          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPKH_ORYSJ (CBL-interacting protein kinase 17 OS=Oryza sativa subsp. japonica GN=CIPK17 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.940e-35
Identity = 78/151 (51.66%), Postives = 97/151 (64.24%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFED 432
            ++VR  EV  + T + +V+E+ +GGELFERI   G+ SE E R  FQQLI GVSYCH   V HRDLK EN L+D      +KI DFG S          +LH    +T G+P YIAPEVL  K YDG ++D+WSCGV LYVML+G  PF+D
Sbjct:   72 HVVRLHEVAASKTKIYMVLEFVNGGELFERIAVKGKLSEKEGRRLFQQLIDGVSYCHDRGVYHRDLKPENVLVD--QKGNIKISDFGLSALPQHLGNDGLLH----TTCGSPNYIAPEVLQNKGYDGSLSDIWSCGVILYVMLIGYLPFDD 216          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: AAPK2_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Mus musculus GN=Prkaa2 PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 5.940e-35
Identity = 80/172 (46.51%), Postives = 101/172 (58.72%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHIS 516
            +I++  +VI TPT   +VMEY SGGELF+ IC  GR  E EAR  FQQ++S V YCH   V HRDLK EN LLD       KI DFG S         +++ G+P Y APEV+  + Y G   D+WSCGV LY +L G  PF+D   P  F+K    I    + IPDY++ S
Sbjct:   75 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQ--MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK----IRGGVFYIPDYLNRS 240          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPKO_ARATH (CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 7.758e-35
Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDY 504
            NIVR  EV+ +P+ + IV+E+ +GGELF+RI + GR  E E+R +FQQL+  V++CH   V HRDLK EN LLD +    LK+ DFG S       +  ++T GTP Y+APEVL  + YDG  AD+WSCGV L+V+L G  PF + + P  +RK    I + ++S P +
Sbjct:   70 NIVRLYEVLASPSKIYIVLEFVTGGELFDRIVHKGRLEESESRKYFQQLVDAVAHCHCKGVYHRDLKPENLLLDTN--GNLKVSDFGLSALPQEGVELLRTTCGTPNYVAPEVLSGQGYDGSAADIWSCGVILFVILAGYLPFSETDLPGLYRK----INAAEFSCPPW 232          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPKF_ORYSJ (CBL-interacting protein kinase 15 OS=Oryza sativa subsp. japonica GN=CIPK15 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 7.758e-35
Identity = 78/159 (49.06%), Postives = 99/159 (62.26%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 468
            NIV+  EV+ T   +  VMEY  GGELFE++   G+ +E  A  +FQQLIS V YCHS  V HRDLK EN LLD +    LK+ DFG S  S    Q     +T GTPAY+APEV+ K  YDG  +D+WSCGV L+V++ G  PF+ P   + +RK  H
Sbjct:   71 NIVQLHEVMATRNKIYFVMEYVKGGELFEKVAKRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDEN--ENLKVSDFGLSALSESKRQDGLLHTTCGTPAYVAPEVISKIGYDGAKSDIWSCGVILFVLVAGYLPFQGPNLMEMYRKIQH 227          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPKE_ORYSJ (CBL-interacting protein kinase 14 OS=Oryza sativa subsp. japonica GN=CIPK14 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 7.758e-35
Identity = 78/159 (49.06%), Postives = 99/159 (62.26%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 468
            NIV+  EV+ T   +  VMEY  GGELFE++   G+ +E  A  +FQQLIS V YCHS  V HRDLK EN LLD +    LK+ DFG S  S    Q     +T GTPAY+APEV+ K  YDG  +D+WSCGV L+V++ G  PF+ P   + +RK  H
Sbjct:   71 NIVQLHEVMATRNKIYFVMEYVKGGELFEKVAKRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDEN--ENLKVSDFGLSALSESKRQDGLLHTTCGTPAYVAPEVISKIGYDGAKSDIWSCGVILFVLVAGYLPFQGPNLMEMYRKIQH 227          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPK8_ORYSJ (CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.013e-34
Identity = 80/167 (47.90%), Postives = 106/167 (63.47%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIP 498
            N+VR  EV+ +   + I++E+ +GGELF++I   GR +E +AR +FQQLI GV +CHS  V HRDLK EN LLD      LKI DFG S   +   +  ++T GTP Y+APEVL  K YDG +AD WSCGV LYV+L G  PF++ +    + K    I S +YS P
Sbjct:   72 NVVRLHEVLASRKKIFIILEFITGGELFDKIIRHGRLNEADARRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQ--GNLKISDFGLSAWPAQGGALLRTTCGTPNYVAPEVLSHKGYDGALADTWSCGVILYVLLAGYLPFDEVDLTTLYGK----IESAEYSFP 232          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPK1_ARATH (CBL-interacting serine/threonine-protein kinase 1 OS=Arabidopsis thaliana GN=CIPK1 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.013e-34
Identity = 76/151 (50.33%), Postives = 98/151 (64.90%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFED 432
            +IVR  EV+ + T + +VME  +GGELF+RI + G+ +E + R  FQQLI G+SYCHS  V HRDLKLEN LLD      +KI DFG S          +LH    +T G+P Y+APEVL  + YDG  +D+WSCGV LYV+L G  PF+D
Sbjct:   79 HIVRLHEVLASKTKINMVMELVTGGELFDRIVSNGKLTETDGRKMFQQLIDGISYCHSKGVFHRDLKLENVLLDAK--GHIKITDFGLSALPQHFRDDGLLH----TTCGSPNYVAPEVLANRGYDGAASDIWSCGVILYVILTGCLPFDD 223          
The following BLAST results are available for this feature:
BLAST of CX288740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPKH_ARATH3.483e-3550.33CBL-interacting serine/threonine-protein kinase 17... [more]
CIPKQ_ORYSJ5.940e-3547.98CBL-interacting protein kinase 26 OS=Oryza sativa ... [more]
CIPKL_ORYSJ5.940e-3547.53CBL-interacting protein kinase 21 OS=Oryza sativa ... [more]
CIPKH_ORYSJ5.940e-3551.66CBL-interacting protein kinase 17 OS=Oryza sativa ... [more]
AAPK2_MOUSE5.940e-3546.515'-AMP-activated protein kinase catalytic subunit ... [more]
CIPKO_ARATH7.758e-3546.15CBL-interacting serine/threonine-protein kinase 24... [more]
CIPKF_ORYSJ7.758e-3549.06CBL-interacting protein kinase 15 OS=Oryza sativa ... [more]
CIPKE_ORYSJ7.758e-3549.06CBL-interacting protein kinase 14 OS=Oryza sativa ... [more]
CIPK8_ORYSJ1.013e-3447.90CBL-interacting protein kinase 8 OS=Oryza sativa s... [more]
CIPK1_ARATH1.013e-3450.33CBL-interacting serine/threonine-protein kinase 1 ... [more]

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Properties
Property NameValue
Genbank descriptionC02003H04SK IF1 Citrus clementina cDNA clone C02003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288740 ID=CX288740; Name=CX288740; organism=Citrus clementina; type=EST; length=519bp
AACATAGTCAGATTCAAGGAGGTCATCTTAACTCCAACCCATCTGGCTAT
TGTGATGGAATATGCTTCCGGAGGAGAGCTCTTTGAGCGGATATGCAATG
CAGGGCGGTTCAGCGAGGACGAGGCACGCTTTTTCTTCCAACAACTTATT
TCTGGAGTGAGCTACTGCCATTCAATGCAAGTATGCCACCGCGACTTGAA
ATTGGAGAATACATTACTGGATGGGAGTCCAGCTCCTCGTCTGAAGATTT
GTGATTTTGGATACTCTAAGTCTTCAGTACTACATTCACAGCCAAAATCA
ACTGTTGGTACTCCTGCATATATTGCCCCTGAAGTGTTGCTTAAGAAAGA
ATATGATGGCAAGATTGCAGATGTATGGTCTTGTGGCGTGACTTTATATG
TTATGTTGGTGGGAGCATATCCTTTTGAGGATCCTGAGGAGCCAAAGAAC
TTCCGCAAGACAATACATCGAATTCTAAGTGTTCAGTACTCTATTCCGGA
TTATGTTCATATATCTCCT
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