CX288740

Overview
NameCX288740
Unique NameCX288740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CAMK1_ORYSJ (Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica GN=CAMK1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.376e-21
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 465
            N+V+F +      ++ IVME   GGEL +RI    G++SE++A+   +Q++S  S+CH   V HRDLK EN L         +K+ DFG S       +    VG+  Y+APEVL +    G  AD+WS GV +Y++L G+ PF    E   FR  +
Sbjct:  210 NLVQFYDAYEDEENVYIVMELCKGGELLDRILARGGKYSEEDAKVVMRQILSVASFCHLQGVVHRDLKPENFLFSSKDENSAMKVIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSY--GTEADMWSIGVIVYILLCGSRPFWARTESGIFRAVL 364          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: TSSK2_MOUSE (Testis-specific serine/threonine-protein kinase 2 OS=Mus musculus GN=Tssk2 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.328e-21
Identity = 61/164 (37.20%), Postives = 86/164 (52.44%), Query Frame = 1
Query:    1 NIVRFKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-----PKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 474
            +I++  E+  T    + IVME    G+L   I   G   ED     F+Q+ S V YCH + V HRDLK EN LLD      +K+ DFG+SK  +          K+  G+ AY APEV     Y  K+ D+WS GV LY+M+ G+ P++D +  K   +  HR+
Sbjct:   71 SIIKTYEIFETSDGRIYIVMELGVQGDLLTFIKCRGALHEDVGGKMFRQVSSAVKYCHDLDVVHRDLKCENLLLDKD--FNIKLSDFGFSKGCLRDGSGRIVLSKTFCGSAAYAAPEVRQGIPYQPKVYDIWSLGVILYIMVCGSMPYDDSDIKKLRIQKEHRV 232          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: STK6_RAT (Serine/threonine-protein kinase 6 OS=Rattus norvegicus GN=Aurka PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.328e-21
Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            NI+R        T + +++EYA  G ++  +    +F E     +  +L + +SYCHS +V HRD+K EN LL  +    LKI DFG+S  +   S+  +  GT  Y  PE++  + +D K+ D+WS GV  Y  LVG  PF    E   +++T  RI  V+++ PD+V
Sbjct:  185 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSN--GELKIADFGWSVHAP-SSRRTTLCGTLDYQPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGMPPF----EAHTYQETYRRISRVEFTFPDFV 345          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SGK1_RAT (Serine/threonine-protein kinase Sgk1 OS=Rattus norvegicus GN=Sgk1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.328e-21
Identity = 57/153 (37.25%), Postives = 83/153 (54.25%), Query Frame = 1
Query:   31 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQ 486
            T   L  V++Y +GGELF  +     F E  ARF+  ++ S + Y HS+ + +RDLK EN LLD      + + DFG  K ++ H+   ST  GTP Y+APEVL K+ YD +  D W  G  LY ML G  PF      + +   +++ L ++
Sbjct:  168 TADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ--GHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK 317          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KPCA_MOUSE (Protein kinase C alpha type OS=Mus musculus GN=Prkca PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 8.328e-21
Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 1
Query:   31 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSI 495
            T   L  VMEY +GG+L   I   G+F E +A F+  ++  G+ + H   + +RDLKL N +L+      +KI DFG  K  ++      T  GTP YIAPE++  + Y GK  D W+ GV LY ML G  PF+  +E + F+  +   +S   S+
Sbjct:  409 TVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLNNVMLNSE--GHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPY-GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSL 561          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KPC2_CAEEL (Protein kinase C-like 2 OS=Caenorhabditis elegans GN=pkc-2 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 8.328e-21
Identity = 56/151 (37.09%), Postives = 85/151 (56.29%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNF 453
            +V       T   L  VME+ +GG+L  +I   G+F E  A F+  ++  G+ + HS  + +RDLKL+N +L+      +KI DFG  K ++   +  K+  GTP YIAPE++L + Y GK  D W+ GV L+ ML G  PF+  +E + F
Sbjct:  409 LVALHSCFQTMDRLYFVMEFVNGGDLMYQIQQVGKFKEPVAVFYAAEIAVGLFFLHSKGIIYRDLKLDNVMLERD--GHIKITDFGMCKENIFGDATTKTFCGTPDYIAPEIILYQPY-GKSVDWWAYGVLLFEMLAGQPPFDGEDEDELF 556          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KCC2G_RAT (Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus GN=Camk2g PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.328e-21
Identity = 59/155 (38.06%), Postives = 84/155 (54.19%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGS-PAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 459
            NIVR  + I       +V +  +GGELFE I     +SE +A     Q++  V++ H   + HRDLK EN LL        +K+ DFG +       Q      GTP Y++PEVL K  Y GK  D+W+CGV LY++LVG  PF D ++ K +++
Sbjct:   72 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQ 225          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KCC2G_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Mus musculus GN=Camk2g PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.328e-21
Identity = 59/155 (38.06%), Postives = 84/155 (54.19%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGS-PAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 459
            NIVR  + I       +V +  +GGELFE I     +SE +A     Q++  V++ H   + HRDLK EN LL        +K+ DFG +       Q      GTP Y++PEVL K  Y GK  D+W+CGV LY++LVG  PF D ++ K +++
Sbjct:   72 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQ 225          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KCC2G_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Homo sapiens GN=CAMK2G PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 8.328e-21
Identity = 59/155 (38.06%), Postives = 84/155 (54.19%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGS-PAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 459
            NIVR  + I       +V +  +GGELFE I     +SE +A     Q++  V++ H   + HRDLK EN LL        +K+ DFG +       Q      GTP Y++PEVL K  Y GK  D+W+CGV LY++LVG  PF D ++ K +++
Sbjct:   72 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQ 225          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KAPB_SCHPO (cAMP-dependent protein kinase catalytic subunit OS=Schizosaccharomyces pombe GN=pka1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.328e-21
Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = 1
Query:   40 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDY 504
            +L +VM++A GGELF  +    RF E  A+F+  ++I  + Y H  Q+ +RDLK EN LLD      LKI DFG++K  V  S   +  GTP Y+APE++  K Y+ K AD WS G+ ++ ML G  PF      +N  K    IL  + + P Y
Sbjct:  273 NLFMVMDFAEGGELFSLLRKCHRFPEKVAKFYAAEVILALDYLHHNQIVYRDLKPENLLLD--RFGHLKIVDFGFAK-RVSTSNCCTLCGTPDYLAPEIISLKPYN-KAADWWSLGILIFEMLAGYPPFYS----ENPMKLYENILEGKVNYPSY 419          
The following BLAST results are available for this feature:
BLAST of CX288740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CAMK1_ORYSJ6.376e-2137.58Calcium/calmodulin-dependent serine/threonine-prot... [more]
TSSK2_MOUSE8.328e-2137.20Testis-specific serine/threonine-protein kinase 2 ... [more]
STK6_RAT8.328e-2134.91Serine/threonine-protein kinase 6 OS=Rattus norveg... [more]
SGK1_RAT8.328e-2137.25Serine/threonine-protein kinase Sgk1 OS=Rattus nor... [more]
KPCA_MOUSE8.328e-2136.54Protein kinase C alpha type OS=Mus musculus GN=Prk... [more]
KPC2_CAEEL8.328e-2137.09Protein kinase C-like 2 OS=Caenorhabditis elegans ... [more]
KCC2G_RAT8.328e-2138.06Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2G_MOUSE8.328e-2138.06Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2G_HUMAN8.328e-2138.06Calcium/calmodulin-dependent protein kinase type I... [more]
KAPB_SCHPO8.328e-2140.00cAMP-dependent protein kinase catalytic subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionC02003H04SK IF1 Citrus clementina cDNA clone C02003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288740 ID=CX288740; Name=CX288740; organism=Citrus clementina; type=EST; length=519bp
AACATAGTCAGATTCAAGGAGGTCATCTTAACTCCAACCCATCTGGCTAT
TGTGATGGAATATGCTTCCGGAGGAGAGCTCTTTGAGCGGATATGCAATG
CAGGGCGGTTCAGCGAGGACGAGGCACGCTTTTTCTTCCAACAACTTATT
TCTGGAGTGAGCTACTGCCATTCAATGCAAGTATGCCACCGCGACTTGAA
ATTGGAGAATACATTACTGGATGGGAGTCCAGCTCCTCGTCTGAAGATTT
GTGATTTTGGATACTCTAAGTCTTCAGTACTACATTCACAGCCAAAATCA
ACTGTTGGTACTCCTGCATATATTGCCCCTGAAGTGTTGCTTAAGAAAGA
ATATGATGGCAAGATTGCAGATGTATGGTCTTGTGGCGTGACTTTATATG
TTATGTTGGTGGGAGCATATCCTTTTGAGGATCCTGAGGAGCCAAAGAAC
TTCCGCAAGACAATACATCGAATTCTAAGTGTTCAGTACTCTATTCCGGA
TTATGTTCATATATCTCCT
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