CX288740

Overview
NameCX288740
Unique NameCX288740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KAPC_ENCCU (Probable cAMP-dependent protein kinase catalytic subunit OS=Encephalitozoon cuniculi GN=ECU07_0520 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.420e-20
Identity = 59/156 (37.82%), Postives = 85/156 (54.49%), Query Frame = 1
Query:   43 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            + ++MEY  GGELF  +   GRF E  ARF+  ++IS + + H   + +RDLK EN L+  +    +K+ DFG+   SV  S+    + GTP Y++PE  L+ E DG+ +D W  GV +Y ML G  PF D      +    H+IL      P YV
Sbjct:   82 VGLIMEYVGGGELFYWLKKCGRFDEQMARFYAAEIISALRFIHGRGILYRDLKPENILI--TSTGHIKLIDFGF---SVYESENIYMISGTPEYMSPE-KLRSEDDGRASDYWGLGVMIYEMLCGDPPFYDSSADAIY----HKILESNVVFPHYV 227          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: PRKX_HUMAN (Serine/threonine-protein kinase PRKX OS=Homo sapiens GN=PRKX PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20
Identity = 53/130 (40.77%), Postives = 77/130 (59.23%), Query Frame = 1
Query:   43 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFED 432
            L ++MEY  GGELF  + N GRFS     F+  ++I  + Y HS ++ +RDLK EN LLD      +K+ DFG++K  V   +  +  GTP Y+APEV+  K + G+  D W+ G+ ++ ML G  PF D
Sbjct:  122 LYMLMEYVPGGELFSYLRNRGRFSSTTGLFYSAEIICAIEYLHSKEIVYRDLKPENILLDRD--GHIKLTDFGFAKKLV--DRTWTLCGTPEYLAPEVIQSKGH-GRAVDWWALGILIFEMLSGFPPFFD 246          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: PLK_DICDI (Probable serine/threonine-protein kinase PLK OS=Dictyostelium discoideum GN=PLK PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20
Identity = 62/173 (35.84%), Postives = 89/173 (51.45%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHIS 516
            NIV+F+       ++ I++E  +   + +         E E +++  Q+I  V Y H+  + HRDLKL N  +D     R+K+ DFG S + V H + K T+ GTP YIAPE+L          DVWS G+ LY +L+G  PF    E  + + T  RI   QYS PD   IS
Sbjct:  222 NIVKFEHCFENEENVYILLELCNQKTVMDIHKKRKYLMEYETKYYVYQVIMAVQYLHNNNIIHRDLKLGNLFIDNM---RIKLGDFGLS-TKVEHGERKKTICGTPNYIAPEILDNSNGHSYEVDVWSIGIILYTLLIGKPPF----ETSDVKHTYQRIKQNQYSFPDEPIIS 386          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KS6A3_MOUSE (Ribosomal protein S6 kinase alpha-3 OS=Mus musculus GN=Rps6ka3 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20
Identity = 56/169 (33.14%), Postives = 96/169 (56.80%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            IV+      T   L +++++  GG+LF R+     F+E++ +F+  +L   + + HS+ + +RDLK EN LLD      +K+ DFG SK S+ H +   S  GT  Y+APEV+ ++ +  + AD WS GV ++ ML G  PF+     K+ ++T+  IL  +  +P ++
Sbjct:  130 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQFL 291          

HSP 2 Score: 90.5077 bits (223), Expect = 5.052e-18
Identity = 62/158 (39.24%), Postives = 84/158 (53.16%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTL-LDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF-----EDPEE 441
            NI+  K+V     ++ +V E   GGEL ++I     FSE EA      +   V Y H+  V HRDLK  N L +D S  P  ++ICDFG++K   L ++    + TP Y    +APEVL ++ YD    D+WS GV LY ML G  PF     + PEE
Sbjct:  475 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ--LRAE-NGLLMTPCYTANFVAPEVLKRQGYDA-ACDIWSLGVLLYTMLTGYTPFANGPDDTPEE 628          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KS6A3_HUMAN (Ribosomal protein S6 kinase alpha-3 OS=Homo sapiens GN=RPS6KA3 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20
Identity = 56/169 (33.14%), Postives = 96/169 (56.80%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            IV+      T   L +++++  GG+LF R+     F+E++ +F+  +L   + + HS+ + +RDLK EN LLD      +K+ DFG SK S+ H +   S  GT  Y+APEV+ ++ +  + AD WS GV ++ ML G  PF+     K+ ++T+  IL  +  +P ++
Sbjct:  130 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQFL 291          

HSP 2 Score: 90.5077 bits (223), Expect = 5.052e-18
Identity = 62/158 (39.24%), Postives = 84/158 (53.16%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTL-LDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF-----EDPEE 441
            NI+  K+V     ++ +V E   GGEL ++I     FSE EA      +   V Y H+  V HRDLK  N L +D S  P  ++ICDFG++K   L ++    + TP Y    +APEVL ++ YD    D+WS GV LY ML G  PF     + PEE
Sbjct:  475 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ--LRAE-NGLLMTPCYTANFVAPEVLKRQGYDA-ACDIWSLGVLLYTMLTGYTPFANGPDDTPEE 628          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KS6A1_RAT (Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus GN=Rps6ka1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20
Identity = 55/169 (32.54%), Postives = 97/169 (57.40%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            +V+      T   L +++++  GG+LF R+     F+E++ +F+  +L  G+ + HS+ + +RDLK EN LLD      +K+ DFG SK ++ H +   S  GT  Y+APEV+ ++ +    AD WS GV ++ ML G+ PF+     K+ ++T+  IL  +  +P ++
Sbjct:  124 VVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHTHS-ADWWSYGVLMFEMLTGSLPFQG----KDRKETMTLILKAKLGMPQFL 285          

HSP 2 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 66/158 (41.77%), Postives = 86/158 (54.43%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTL-LDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF-----EDPEE 441
            NI+  K+V     H+ +V E   GGEL ++I     FSE EA F    +   V Y HS  V HRDLK  N L +D S  P  L+ICDFG++K   L ++    + TP Y    +APEVL ++ YD +  D+WS GV LY ML G  PF     + PEE
Sbjct:  471 NIITLKDVYDDSKHVYLVTELMRGGELLDKILRQKFFSEREASFVLYTISKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ--LRAE-NGLLMTPCYTANFVAPEVLKRQGYD-EGCDIWSLGVLLYTMLAGYTPFANGPSDTPEE 624          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KIN1_YEAST (Serine/threonine protein kinase KIN1 OS=Saccharomyces cerevisiae GN=KIN1 PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20
Identity = 53/144 (36.81%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFED 432
            +I R  E+     H  ++ EY SGG+L + I   G   E +AR F + + S + Y H+  + HRDLK+EN ++  S +  +KI DFG S       Q  +  G+  + APE+L    Y G   DVWS GV L+V++ G  PF+D
Sbjct:  205 HICRLFEMCTLSNHFYMLFEYVSGGQLLDYIIQHGSIREHQARKFARGIASALIYLHANNIVHRDLKIENIMI--SDSSEIKIIDFGLSNIYDSRKQLHTFCGSLYFAAPELLKANPYTGPEVDVWSFGVVLFVLVCGKVPFDD 346          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: GAD8_SCHPO (Serine/threonine-protein kinase gad8 OS=Schizosaccharomyces pombe GN=gad8 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20
Identity = 60/169 (35.50%), Postives = 88/169 (52.07%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            IV  K    +P  L +V+ + +GGELF  +   G F    A+F+  +L+  +   H   V +RDLK EN LLD +    + +CDFG  K ++  +   +T  GTP Y+APE+LL   Y  K+ D W+ GV LY M+ G  PF D    +N  +   +IL      PD +
Sbjct:  290 IVPLKFSFQSPGKLYLVLAFVNGGELFHHLQREGCFDTYRAKFYIAELLVALECLHEFNVIYRDLKPENILLDYT--GHIALCDFGLCKLNMAKTDRTNTFCGTPEYLAPELLLGHGYT-KVVDWWTLGVLLYEMITGLPPFYD----ENINEMYRKILQDPLRFPDNI 451          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: FHKE_DICDI (Probable serine/threonine-protein kinase fhkE OS=Dictyostelium discoideum GN=fhkE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20
Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLL---DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK---EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 459
            NI++  EV      L++++E    GEL   I +   ++ED+A+  F+Q++ GV Y H+  + HRDLK EN LL   + +    +K+ DFG S++    S  K+  GTP Y+APE+L         G   D WS G  LY+ML G  PF+D  E   F +
Sbjct:  206 NIIQIIEVFENEKVLSLILELVECGELLNDIVSNLFYTEDKAKTLFRQIVDGVLYLHNKGIAHRDLKPENILLKHKNFNQNDAIKLTDFGLSRTVSDGSFMKTMCGTPQYLAPEILTSSGGHNGYGLEVDCWSMGAILYIMLCGYPPFDDSREVSIFEQ 364          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20
Identity = 63/143 (44.06%), Postives = 79/143 (55.24%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF 426
            NIV  K        + ++ME   GGELF+RI + G +SE  A    +Q++  V  CHSM V HRDLK EN L L       LK  DFG S       + K  VG+  Y+APEV LK+ Y G  AD+WS GV LY++L G  PF
Sbjct:  138 NIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYSERAAADLCRQMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDKFKDLVGSAYYVAPEV-LKRNY-GPEADIWSAGVILYILLSGVPPF 278          
The following BLAST results are available for this feature:
BLAST of CX288740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAPC_ENCCU1.420e-2037.82Probable cAMP-dependent protein kinase catalytic s... [more]
PRKX_HUMAN1.855e-2040.77Serine/threonine-protein kinase PRKX OS=Homo sapie... [more]
PLK_DICDI1.855e-2035.84Probable serine/threonine-protein kinase PLK OS=Di... [more]
KS6A3_MOUSE1.855e-2033.14Ribosomal protein S6 kinase alpha-3 OS=Mus musculu... [more]
KS6A3_HUMAN1.855e-2033.14Ribosomal protein S6 kinase alpha-3 OS=Homo sapien... [more]
KS6A1_RAT1.855e-2032.54Ribosomal protein S6 kinase alpha-1 OS=Rattus norv... [more]
KIN1_YEAST1.855e-2036.81Serine/threonine protein kinase KIN1 OS=Saccharomy... [more]
GAD8_SCHPO1.855e-2035.50Serine/threonine-protein kinase gad8 OS=Schizosacc... [more]
FHKE_DICDI1.855e-2036.48Probable serine/threonine-protein kinase fhkE OS=D... [more]
CDPK3_ARATH1.855e-2044.06Calcium-dependent protein kinase 3 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC02003H04SK IF1 Citrus clementina cDNA clone C02003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288740 ID=CX288740; Name=CX288740; organism=Citrus clementina; type=EST; length=519bp
AACATAGTCAGATTCAAGGAGGTCATCTTAACTCCAACCCATCTGGCTAT
TGTGATGGAATATGCTTCCGGAGGAGAGCTCTTTGAGCGGATATGCAATG
CAGGGCGGTTCAGCGAGGACGAGGCACGCTTTTTCTTCCAACAACTTATT
TCTGGAGTGAGCTACTGCCATTCAATGCAAGTATGCCACCGCGACTTGAA
ATTGGAGAATACATTACTGGATGGGAGTCCAGCTCCTCGTCTGAAGATTT
GTGATTTTGGATACTCTAAGTCTTCAGTACTACATTCACAGCCAAAATCA
ACTGTTGGTACTCCTGCATATATTGCCCCTGAAGTGTTGCTTAAGAAAGA
ATATGATGGCAAGATTGCAGATGTATGGTCTTGTGGCGTGACTTTATATG
TTATGTTGGTGGGAGCATATCCTTTTGAGGATCCTGAGGAGCCAAAGAAC
TTCCGCAAGACAATACATCGAATTCTAAGTGTTCAGTACTCTATTCCGGA
TTATGTTCATATATCTCCT
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