CX288740

Overview
NameCX288740
Unique NameCX288740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: IPL1_YARLI (Spindle assembly checkpoint kinase OS=Yarrowia lipolytica GN=IPL1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.423e-20
Identity = 59/154 (38.31%), Postives = 86/154 (55.84%), Query Frame = 1
Query:   49 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            +++EY   GEL++ + N  RF+E  A  +  Q+   + Y H   + HRD+K EN LL  +    +KI DFG+S  +   S  +ST+ GT  Y+ PE++  + YD K  DVWS G+ +Y  L GA PF   EEP   + T  RI+ +   IP YV
Sbjct:  174 LILEYVVHGELYKLLRNQKRFTESTASSYIYQMSEALLYLHGKNIIHRDIKPENILLHFNDT--IKISDFGWSVHA--PSNRRSTLCGTMDYLPPEIVQSRPYD-KNVDVWSLGILMYEFLCGAPPF---EEPGGAQATYRRIVKLDLRIPPYV 319          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CDPKL_ARATH (Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.423e-20
Identity = 63/156 (40.38%), Postives = 81/156 (51.92%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 465
            NIV  K        + +VME  +GGELF+RI   G +SE  A    + +++ V  CH M V HRDLK EN LL        LK  DFG S         +  VG+  Y+APEV L++ Y GK  D+WS GV LY++L G  PF    E   F + I
Sbjct:  140 NIVEIKGAYEDRQSIHLVMELCAGGELFDRIIAQGHYSERAAAGIIRSIVNVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRSY-GKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEVI 293          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.423e-20
Identity = 57/140 (40.71%), Postives = 78/140 (55.71%), Query Frame = 1
Query:   49 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 465
            +VME  +GGELF+RI   G ++E +A    + ++  +  CHS+ V HRDLK EN L + G     LK  DFG S            VG+P Y+APEV L+K Y  +  DVWS GV +Y++L G  PF D  E   F + +
Sbjct:  210 VVMEICAGGELFDRIIQRGHYTEKKAAELARIIVGVIEACHSLGVMHRDLKPENFLFVSGDEEAALKTIDFGLSVFFKPGETFTDVVGSPYYVAPEV-LRKHYSHE-CDVWSAGVIIYILLSGVPPFWDETEQGIFEQVL 347          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CDPK3_PLAYO (Calcium-dependent protein kinase 3 OS=Plasmodium yoelii yoelii GN=CPK3 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.423e-20
Identity = 59/163 (36.20%), Postives = 90/163 (55.21%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLL-DGSPAPRLKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSV 483
            N+++  E       + ++M+  +GGELF++I   G F E  A F  +Q+ S ++Y H   +CHRD+K EN L  D S    +KI DFG +   + +  + K+  GTP Y+AP+VL    YD K  D+WS GV  Y++L G  PF        + ++ H ILS+
Sbjct:  168 NVIKLLETFEDEEQIYLIMDLCTGGELFDKIIKKGSFVEMYASFIMKQIFSVLNYLHIRNICHRDIKPENFLFYDKSTESLIKIIDFGLAAYFNDIDYEMKTKAGTPYYVAPQVLTGC-YDYK-CDLWSAGVLFYIILCGYPPF--------YGESDHEILSM 320          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.423e-20
Identity = 60/157 (38.22%), Postives = 82/157 (52.23%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 468
            N++  K        + +VME  +GGELF+RI   G ++E +A    + ++  V  CHS+ V HRDLK EN L +       LK  DFG S            VG+P Y+APEVL K+   G  ADVWS GV +Y++L G  PF    E   F + +H
Sbjct:  210 NVISIKGAYEDVVAVHLVMECCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGLSMFFKPDDVFTDVVGSPYYVAPEVLRKRY--GPEADVWSAGVIVYILLSGVPPFWAETEQGIFEQVLH 364          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: ST17A_RABIT (Serine/threonine-protein kinase 17A OS=Oryctolagus cuniculus GN=STK17A PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 58/156 (37.18%), Postives = 87/156 (55.77%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD--GKIADVWSCGVTLYVMLVGAYPFEDPEEPKNF 453
            ++   EV  T + + +V+EYA+GGE+ ++ C A R   F+E + +   +Q++ GV + H+  V H DLK +N LL   SP   +KI DFG S+      + +  +GTP Y+APE+L    YD      D+WS GV  YVML G  PF    + + F
Sbjct:  104 VINLHEVYETSSEMILVLEYAAGGEISDQ-CVADRDEAFNEKDVQRLMRQILEGVHFLHTHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIVKNSEELREIMGTPEYVAPEIL---SYDPISMATDMWSIGVLTYVMLTGISPFLGDNKQETF 255          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SGK3_MOUSE (Serine/threonine-protein kinase Sgk3 OS=Mus musculus GN=Sgk3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 1
Query:   31 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQ 486
            T   L  V+++ +GGELF  +     F E  ARF+  ++ S + Y HS+++ +RDLK EN LLD      + + DFG  K  +  S   +T  GTP Y+APEV+ K+ YD  + D W  G  LY ML G  PF   +  + +   +H+ L+++
Sbjct:  232 TTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSIKIVYRDLKPENILLDS--MGHVVLTDFGLCKEGIAISDTTTTFCGTPEYLAPEVIRKQPYDNTV-DWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLNLR 381          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: PKN2_MOUSE (Serine/threonine-protein kinase N2 OS=Mus musculus GN=Pkn2 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = 1
Query:   31 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 468
            T  H+  VMEYA+GG+L   I +   FSE  A F+   ++ G+ Y H  ++ +RDLKL+N LLD      +KI DFG  K  + +    ST  GTP ++APEVL +  Y  +  D W  GV +Y MLVG  PF   +E + F   ++
Sbjct:  728 TKEHVCFVMEYAAGGDLMMHI-HTDVFSEPRAVFYAACVVLGLQYLHEHKIVYRDLKLDNLLLDTEGF--VKIADFGLCKEGMGYGDRTSTFCGTPEFLAPEVLTETSYT-RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVN 870          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: PKN2_HUMAN (Serine/threonine-protein kinase N2 OS=Homo sapiens GN=PKN2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = 1
Query:   31 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 468
            T  H+  VMEYA+GG+L   I +   FSE  A F+   ++ G+ Y H  ++ +RDLKL+N LLD      +KI DFG  K  + +    ST  GTP ++APEVL +  Y  +  D W  GV +Y MLVG  PF   +E + F   ++
Sbjct:  729 TKEHVCFVMEYAAGGDLMMHI-HTDVFSEPRAVFYAACVVLGLQYLHEHKIVYRDLKLDNLLLDTEGF--VKIADFGLCKEGMGYGDRTSTFCGTPEFLAPEVLTETSYT-RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVN 871          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: PK3_DICDI (Protein kinase 3 OS=Dictyostelium discoideum GN=pkgC PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 59/151 (39.07%), Postives = 83/151 (54.97%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQ-------PKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF 426
            IVR          L + M+Y  GGELF  +  AG+F E+ A+F+  ++I  + Y HS  + +RD+K EN LLD      +K+ DFG SKS   SV+ S+         +  GTP Y+APE++    + GK AD WS G+ L+ ML G  PF
Sbjct:  558 IVRLHFAFQNEDFLFMCMDYVPGGELFHHLQKAGKFPEELAKFYIAEVICSLHYLHSNNIIYRDIKPENILLD--EEGHIKLTDFGLSKSGITSVVGSKNGGEGGFATTFCGTPEYLAPEIITGAGH-GKAADWWSVGILLFEMLTGRSPF 705          
The following BLAST results are available for this feature:
BLAST of CX288740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IPL1_YARLI2.423e-2038.31Spindle assembly checkpoint kinase OS=Yarrowia lip... [more]
CDPKL_ARATH2.423e-2040.38Calcium-dependent protein kinase 21 OS=Arabidopsis... [more]
CDPKK_ARATH2.423e-2040.71Calcium-dependent protein kinase 20 OS=Arabidopsis... [more]
CDPK3_PLAYO2.423e-2036.20Calcium-dependent protein kinase 3 OS=Plasmodium y... [more]
CDPK1_ARATH2.423e-2038.22Calcium-dependent protein kinase 1 OS=Arabidopsis ... [more]
ST17A_RABIT3.165e-2037.18Serine/threonine-protein kinase 17A OS=Oryctolagus... [more]
SGK3_MOUSE3.165e-2035.95Serine/threonine-protein kinase Sgk3 OS=Mus muscul... [more]
PKN2_MOUSE3.165e-2039.46Serine/threonine-protein kinase N2 OS=Mus musculus... [more]
PKN2_HUMAN3.165e-2039.46Serine/threonine-protein kinase N2 OS=Homo sapiens... [more]
PK3_DICDI3.165e-2039.07Protein kinase 3 OS=Dictyostelium discoideum GN=pk... [more]

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Properties
Property NameValue
Genbank descriptionC02003H04SK IF1 Citrus clementina cDNA clone C02003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288740 ID=CX288740; Name=CX288740; organism=Citrus clementina; type=EST; length=519bp
AACATAGTCAGATTCAAGGAGGTCATCTTAACTCCAACCCATCTGGCTAT
TGTGATGGAATATGCTTCCGGAGGAGAGCTCTTTGAGCGGATATGCAATG
CAGGGCGGTTCAGCGAGGACGAGGCACGCTTTTTCTTCCAACAACTTATT
TCTGGAGTGAGCTACTGCCATTCAATGCAAGTATGCCACCGCGACTTGAA
ATTGGAGAATACATTACTGGATGGGAGTCCAGCTCCTCGTCTGAAGATTT
GTGATTTTGGATACTCTAAGTCTTCAGTACTACATTCACAGCCAAAATCA
ACTGTTGGTACTCCTGCATATATTGCCCCTGAAGTGTTGCTTAAGAAAGA
ATATGATGGCAAGATTGCAGATGTATGGTCTTGTGGCGTGACTTTATATG
TTATGTTGGTGGGAGCATATCCTTTTGAGGATCCTGAGGAGCCAAAGAAC
TTCCGCAAGACAATACATCGAATTCTAAGTGTTCAGTACTCTATTCCGGA
TTATGTTCATATATCTCCT
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