CX288740

Overview
NameCX288740
Unique NameCX288740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KPCD3_MOUSE (Serine/threonine-protein kinase D3 OS=Mus musculus GN=Prkd3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 57/149 (38.26%), Postives = 85/149 (57.05%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE 441
            IV  + +  TP  + +VME   G ++ E I ++   R  E   +F   Q++  +   H   + H DLK EN LL    P P++K+CDFG+++     S  +S VGTPAY+APEVL  K Y+  + D+WS GV +YV L G +PF + E+
Sbjct:  634 IVNLECMFETPERVFVVMEKLHG-DMLEMILSSEKSRLPERITKFMVTQILVALRNLHFKNIVHCDLKPENVLLASAEPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRSKGYNRSL-DMWSVGVIVYVSLSGTFPFNEDED 780          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 59/157 (37.58%), Postives = 82/157 (52.23%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 468
            N++  K        + +VME  SGGELF+RI   G ++E +A    + ++  +  CHS+ V HRDLK EN L +       LK  DFG S            VG+P Y+APEVL K+   G  +DVWS GV +Y++L G  PF    E   F + +H
Sbjct:  246 NVISIKGAYEDVVAVHLVMELCSGGELFDRIIQRGHYTERKAAELARTIVGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDEVFTDVVGSPYYVAPEVLRKRY--GPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLH 400          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CDC5_YEAST (Cell cycle serine/threonine-protein kinase CDC5/MSD2 OS=Saccharomyces cerevisiae GN=CDC5 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 58/145 (40.00%), Postives = 79/145 (54.48%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKI-ADVWSCGVTLYVMLVGAYPFE 429
            NIV+F +     +++ I++E    G L E +      +E E RFF  Q+   + Y HS +V HRDLKL N   D +    LKI DFG +      S+ K T+ GTP YIAPEVL+ K        D+WS GV LY +L+G  PF+
Sbjct:  140 NIVQFIDCFEDDSNVYILLEICPNGSLMELLKRRKVLTEPEVRFFTTQICGAIKYMHSRRVIHRDLKLGNIFFDSN--YNLKIGDFGLAAVLANESERKYTICGTPNYIAPEVLMGKHSGHSFEVDIWSLGVMLYALLIGKPPFQ 282          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: ARK1_SCHPO (Serine/threonine-protein kinase ark1 OS=Schizosaccharomyces pombe GN=ark1 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 65/172 (37.79%), Postives = 94/172 (54.65%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            NI+R          + +++E+A  GEL++ +  A RFSE+ A  +  Q+ + +SY H   V HRD+K EN LL  DG     +K+ DFG+S  +   S  ++T+ GT  Y+ PE++  KE+  K+ D+WS GV  Y  LVGA PFED         T  RI  V   IP +V
Sbjct:  148 NILRLYGHFHDEKRIYLILEFAGRGELYQHLRRAKRFSEEVASKYIFQMANALSYLHKKHVIHRDIKPENILLGIDG----EIKLSDFGWSVHA--PSNRRTTLCGTLDYLPPEMVEGKEHTEKV-DLWSLGVLTYEFLVGAPPFED---MSGHSATYKRIAKVDLKIPSFV 309          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: TSSK4_HUMAN (Testis-specific serine/threonine-protein kinase 4 OS=Homo sapiens GN=TSSK4 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 61/170 (35.88%), Postives = 89/170 (52.35%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP-----------------KSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKT 462
            ++ F   I + + + I++E A GG++ E I   G  SE  A  +F QL  G++Y HS  + HRDLKLEN LLD      +KI DFG++K  V  +QP                 ++  G+ AY  PE+L    Y+  ++D WS GV LY ++V   PF+D    K  R+T
Sbjct:   85 LINFYRAIESTSRVYIILELAQGGDVLEWIQRYGACSEPLAGKWFSQLTLGIAYLHSKSIVHRDLKLENLLLD--KWENVKISDFGFAK-MVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYNPFLSDTWSMGVILYTLVVAHLPFDDTNLKKLLRET 251          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SGK3_RAT (Serine/threonine-protein kinase Sgk3 OS=Rattus norvegicus GN=Sgk3 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 1
Query:   31 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQ 486
            T   L  V+++ +GGELF  +     F E  ARF+  ++ S + Y HS+++ +RDLK EN LLD      + + DFG  K  +  S   +T  GTP Y+APEV+ K+ YD +  D W  G  LY ML G  PF   +  + +   +H+ L+++
Sbjct:  232 TTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSIKIVYRDLKPENILLDS--MGHVVLTDFGLCKEGIAISDTTTTFCGTPEYLAPEVIRKQPYD-RTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLNLR 381          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SGK1B_XENLA (Serine/threonine-protein kinase Sgk1-B OS=Xenopus laevis GN=sgk1-B PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 1
Query:   25 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSI 495
            I T + L  +++Y +GGELF  +     F E  ARF+  ++ S + Y HS+ + +RDLK EN LLD      + + DFG  K ++  +   ST  GTP Y+APEVL K+ YD +  D W  G  LY ML G  PF      + +   +++ L ++ +I
Sbjct:  169 IQTTSRLYFILDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ--GHIVLTDFGLCKENIEPNGITSTFCGTPEYLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNI 323          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SGK1A_XENLA (Serine/threonine-protein kinase Sgk1-A OS=Xenopus laevis GN=sgk1-A PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 56/156 (35.90%), Postives = 85/156 (54.49%), Query Frame = 1
Query:   31 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSI 495
            T + L  +++Y +GGELF  +     F E  ARF+  ++ S + Y HS+ + +RDLK EN LLD      + + DFG  K ++  +   ST  GTP Y+APEVL K+ YD +  D W  G  LY ML G  PF      + +   +++ L ++ +I
Sbjct:  171 TTSRLYFILDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ--GHIVLTDFGLCKENIEPNGTTSTFCGTPEYLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNI 323          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: PLK1_MOUSE (Serine/threonine-protein kinase PLK1 OS=Mus musculus GN=Plk1 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 65/174 (37.36%), Postives = 91/174 (52.30%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHISP 519
            ++V F +       + +V+E      L E        +E EAR++ +Q++ G  Y H  QV HRDLKL N  L+      +KI DFG +       + K T+ GTP YIAPEVL KK +  ++ DVWS G  +Y +LVG  PF    E    ++T  RI   +YSIP   HI+P
Sbjct:  112 HVVGFHDFFEDSDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNQVIHRDLKLGNLFLNED--LEVKIGDFGLATKVEYEGERKKTLCGTPNYIAPEVLSKKGHSFEV-DVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK--HINP 276          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: MAPK2_RABIT (MAP kinase-activated protein kinase 2 (Fragments) OS=Oryctolagus cuniculus GN=MAPKAPK2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 55/131 (41.98%), Postives = 76/131 (58.02%), Query Frame = 1
Query:   43 LAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGS-PAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF 426
            L IVME   GG LF RI + G   F+E EA    + +   + Y HS+ + HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL  ++YD K  D+WS GV +Y++L G  PF
Sbjct:  100 LLIVMECLDGGLLFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPKAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPF 229          
The following BLAST results are available for this feature:
BLAST of CX288740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KPCD3_MOUSE3.165e-2038.26Serine/threonine-protein kinase D3 OS=Mus musculus... [more]
CDPK2_ARATH3.165e-2037.58Calcium-dependent protein kinase 2 OS=Arabidopsis ... [more]
CDC5_YEAST3.165e-2040.00Cell cycle serine/threonine-protein kinase CDC5/MS... [more]
ARK1_SCHPO3.165e-2037.79Serine/threonine-protein kinase ark1 OS=Schizosacc... [more]
TSSK4_HUMAN4.133e-2035.88Testis-specific serine/threonine-protein kinase 4 ... [more]
SGK3_RAT4.133e-2035.95Serine/threonine-protein kinase Sgk3 OS=Rattus nor... [more]
SGK1B_XENLA4.133e-2036.08Serine/threonine-protein kinase Sgk1-B OS=Xenopus ... [more]
SGK1A_XENLA4.133e-2035.90Serine/threonine-protein kinase Sgk1-A OS=Xenopus ... [more]
PLK1_MOUSE4.133e-2037.36Serine/threonine-protein kinase PLK1 OS=Mus muscul... [more]
MAPK2_RABIT4.133e-2041.98MAP kinase-activated protein kinase 2 (Fragments) ... [more]

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Properties
Property NameValue
Genbank descriptionC02003H04SK IF1 Citrus clementina cDNA clone C02003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288740 ID=CX288740; Name=CX288740; organism=Citrus clementina; type=EST; length=519bp
AACATAGTCAGATTCAAGGAGGTCATCTTAACTCCAACCCATCTGGCTAT
TGTGATGGAATATGCTTCCGGAGGAGAGCTCTTTGAGCGGATATGCAATG
CAGGGCGGTTCAGCGAGGACGAGGCACGCTTTTTCTTCCAACAACTTATT
TCTGGAGTGAGCTACTGCCATTCAATGCAAGTATGCCACCGCGACTTGAA
ATTGGAGAATACATTACTGGATGGGAGTCCAGCTCCTCGTCTGAAGATTT
GTGATTTTGGATACTCTAAGTCTTCAGTACTACATTCACAGCCAAAATCA
ACTGTTGGTACTCCTGCATATATTGCCCCTGAAGTGTTGCTTAAGAAAGA
ATATGATGGCAAGATTGCAGATGTATGGTCTTGTGGCGTGACTTTATATG
TTATGTTGGTGGGAGCATATCCTTTTGAGGATCCTGAGGAGCCAAAGAAC
TTCCGCAAGACAATACATCGAATTCTAAGTGTTCAGTACTCTATTCCGGA
TTATGTTCATATATCTCCT
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