CX288740

Overview
NameCX288740
Unique NameCX288740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KS6A2_HUMAN (Ribosomal protein S6 kinase alpha-2 OS=Homo sapiens GN=RPS6KA2 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 56/169 (33.14%), Postives = 97/169 (57.40%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            IV+      T   L +++++  GG+LF R+     F+E++ +F+  +L   + + HS+ + +RDLK EN LLD      +KI DFG SK ++ H  +  S  GT  Y+APEV+ ++ +  + AD WS GV ++ ML G+ PF+     K+ ++T+  IL  +  +P ++
Sbjct:  121 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD--EEGHIKITDFGLSKEAIDHDKRAYSFCGTIEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGSLPFQG----KDRKETMALILKAKLGMPQFL 282          

HSP 2 Score: 90.8929 bits (224), Expect = 3.868e-18
Identity = 61/158 (38.61%), Postives = 81/158 (51.27%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLL-DGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF-----EDPEE 441
            NI+  K+V      + +VME   GGEL +RI     FSE EA      +   + Y HS  V HRDLK  N L  D S +P  +++CDFG++K           + TP Y    +APEVL ++ YD    D+WS G+ LY ML G  PF     + PEE
Sbjct:  468 NIITLKDVYDDGKFVYLVMELMRGGELLDRILRQRYFSEREASDVLCTITKTMDYLHSQGVVHRDLKPSNILYRDESGSPESIRVCDFGFAKQL---RAGNGLLMTPCYTANFVAPEVLKRQGYDA-ACDIWSLGILLYTMLAGFTPFANGPDDTPEE 621          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KS6A1_CAEEL (Putative ribosomal protein S6 kinase alpha-1 OS=Caenorhabditis elegans GN=rskn-1 PE=1 SV=4)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 55/169 (32.54%), Postives = 94/169 (55.62%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV-LHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            IV+      T   L +++++  GG+LF R+     F+ED+ +F+  +L   + + HS+ + +RDLK EN LLD      +K+ DFG SK ++    +  S  GT  Y+APEV+ ++ +    AD WS GV ++ ML G  PF+     ++   T+ +IL  + S+P ++
Sbjct:  166 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEDDVKFYLAELTLALEHLHSLGIVYRDLKPENILLDAD--GHIKVTDFGLSKEAIDSEKKTYSFCGTVEYMAPEVINRRGH-SMAADFWSLGVLMFEMLTGHLPFQG----RDRNDTMTQILKAKLSMPHFL 327          

HSP 2 Score: 89.3521 bits (220), Expect = 1.126e-17
Identity = 57/146 (39.04%), Postives = 78/146 (53.42%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLL---DGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF 426
            +V+  +V    T + ++ E   GGEL +++ N     SE E       L++ V Y HS QV HRDL   N L    DG P+  L+I DFG++K S   +    T   T  ++APEVL K+ YD +  DVWS GV L+ ML G  PF
Sbjct:  508 VVKLFDVYEDETAIYMIEELCEGGELLDKLVNKKSLGSEKEVAAIMANLLNAVQYLHSQQVAHRDLTAANILFALKDGDPSS-LRIVDFGFAKQSRAENGMLMTPCYTAQFVAPEVLRKQGYD-RSCDVWSLGVLLHTMLTGCTPF 651          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KGP1_RABIT (cGMP-dependent protein kinase 1 OS=Oryctolagus cuniculus GN=PRKG1 PE=2 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 53/162 (32.72%), Postives = 86/162 (53.09%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQY 489
            IVR         +L ++ME   GGEL+  + + G F +   RF+   ++   +Y HS  + +RDLK EN +LD       K+ DFG++K      +  +  GTP Y+APE++L K +D   AD WS G+ +Y +L G+ PF  P+  K +   +  I  +++
Sbjct:  421 IVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILD--HRGYAKLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDIS-ADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIEF 579          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KGP1_MOUSE (cGMP-dependent protein kinase 1 OS=Mus musculus GN=Prkg1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 53/162 (32.72%), Postives = 86/162 (53.09%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQY 489
            IVR         +L ++ME   GGEL+  + + G F +   RF+   ++   +Y HS  + +RDLK EN +LD       K+ DFG++K      +  +  GTP Y+APE++L K +D   AD WS G+ +Y +L G+ PF  P+  K +   +  I  +++
Sbjct:  421 IVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILD--HRGYAKLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDIS-ADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIEF 579          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KGP1_HUMAN (cGMP-dependent protein kinase 1 OS=Homo sapiens GN=PRKG1 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 53/162 (32.72%), Postives = 86/162 (53.09%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQY 489
            IVR         +L ++ME   GGEL+  + + G F +   RF+   ++   +Y HS  + +RDLK EN +LD       K+ DFG++K      +  +  GTP Y+APE++L K +D   AD WS G+ +Y +L G+ PF  P+  K +   +  I  +++
Sbjct:  421 IVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILD--HRGYAKLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDIS-ADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIEF 579          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KGP1_BOVIN (cGMP-dependent protein kinase 1 OS=Bos taurus GN=PRKG1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 53/162 (32.72%), Postives = 86/162 (53.09%), Query Frame = 1
Query:    4 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQY 489
            IVR         +L ++ME   GGEL+  + + G F +   RF+   ++   +Y HS  + +RDLK EN +LD       K+ DFG++K      +  +  GTP Y+APE++L K +D   AD WS G+ +Y +L G+ PF  P+  K +   +  I  +++
Sbjct:  421 IVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILD--HRGYAKLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDIS-ADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIEF 579          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KCC2_YEAST (Calcium/calmodulin-dependent protein kinase II OS=Saccharomyces cerevisiae GN=CMK2 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF 426
            NIV FK+   +     IV + A+GGELF+RI + G+F+E +A     Q++  V Y HS  V HRDLK EN L +D S    L I DFG +K   L  +        G+  Y+APEVL +  + GK  D+WS GV  Y +L G  PF
Sbjct:  107 NIVSFKDWFESKDKFYIVTQLATGGELFDRILSRGKFTEVDAVEIIVQILGAVEYMHSKNVVHRDLKPENVLYVDKSENSPLVIADFGIAKQ--LKGEEDLIYKAAGSLGYVAPEVLTQDGH-GKPCDIWSIGVITYTLLCGYSPF 249          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CDPKR_ARATH (Calcium-dependent protein kinase 27 OS=Arabidopsis thaliana GN=CPK27 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 66/169 (39.05%), Postives = 90/169 (53.25%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERIC---NAGR-FSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYS 492
            NIV FK        + IVMEY  GGEL+++I    + G+ +SE EA    + +++ V  CH M V HRDLK EN LL        +K+ DFG S         +   G+  YIAPEV L+  Y GK AD+WS G+ LY++L G  PF    E + F +   + L + YS
Sbjct:   88 NIVEFKNAYEDKDSVHIVMEYCGGGELYDKILALYDVGKSYSEKEAAGIIRSIVNVVKNCHYMGVMHRDLKPENFLLTSNDDNATVKVIDFGCSVFIEEGKVYQDLAGSDYYIAPEV-LQGNY-GKEADIWSAGIILYILLCGKSPFVKEPEGQMFNEI--KSLEIDYS 252          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CDPKJ_ARATH (Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 60/144 (41.67%), Postives = 76/144 (52.78%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDG--SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF 426
            NIV  K        + +VME   GGELF++I   G +SE  A    + ++  V  CH M V HRDLK EN LL      +  LK  DFG S         +  VG+  Y+APEV LK+ Y GK  D+WS GV LY++L G  PF
Sbjct:  158 NIVEIKGAYEDRQSVHLVMELCEGGELFDKITKRGHYSEKAAAEIIRSVVKVVQICHFMGVIHRDLKPENFLLSSKDEASSMLKATDFGVSVFIEEGKVYEDIVGSAYYVAPEV-LKRNY-GKAIDIWSAGVILYILLCGNPPF 299          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: ULK3_MOUSE (Serine/threonine-protein kinase ULK3 OS=Mus musculus GN=Ulk3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF 426
            +IV+ K+      ++ ++ME+ +GG+L   I       E  AR F QQL S + + H   + H DLK +N LL     P LK+ DFG+++      +     G+P Y+APE++ +++YD ++ D+WS GV LY  L G  PF
Sbjct:   73 HIVQLKDFQWDNDNIYLIMEFCAGGDLSRFIHTRRILPEKVARVFMQQLASALQFLHERNISHLDLKPQNILLSSLEKPHLKLADFGFAQHMSPWDEKHVLRGSPLYMAPEMVCRRQYDARV-DLWSVGVILYEALFGQPPF 213          
The following BLAST results are available for this feature:
BLAST of CX288740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KS6A2_HUMAN4.133e-2033.14Ribosomal protein S6 kinase alpha-2 OS=Homo sapien... [more]
KS6A1_CAEEL4.133e-2032.54Putative ribosomal protein S6 kinase alpha-1 OS=Ca... [more]
KGP1_RABIT4.133e-2032.72cGMP-dependent protein kinase 1 OS=Oryctolagus cun... [more]
KGP1_MOUSE4.133e-2032.72cGMP-dependent protein kinase 1 OS=Mus musculus GN... [more]
KGP1_HUMAN4.133e-2032.72cGMP-dependent protein kinase 1 OS=Homo sapiens GN... [more]
KGP1_BOVIN4.133e-2032.72cGMP-dependent protein kinase 1 OS=Bos taurus GN=P... [more]
KCC2_YEAST4.133e-2041.78Calcium/calmodulin-dependent protein kinase II OS=... [more]
CDPKR_ARATH4.133e-2039.05Calcium-dependent protein kinase 27 OS=Arabidopsis... [more]
CDPKJ_ARATH4.133e-2041.67Calcium-dependent protein kinase 19 OS=Arabidopsis... [more]
ULK3_MOUSE5.398e-2035.21Serine/threonine-protein kinase ULK3 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionC02003H04SK IF1 Citrus clementina cDNA clone C02003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288740 ID=CX288740; Name=CX288740; organism=Citrus clementina; type=EST; length=519bp
AACATAGTCAGATTCAAGGAGGTCATCTTAACTCCAACCCATCTGGCTAT
TGTGATGGAATATGCTTCCGGAGGAGAGCTCTTTGAGCGGATATGCAATG
CAGGGCGGTTCAGCGAGGACGAGGCACGCTTTTTCTTCCAACAACTTATT
TCTGGAGTGAGCTACTGCCATTCAATGCAAGTATGCCACCGCGACTTGAA
ATTGGAGAATACATTACTGGATGGGAGTCCAGCTCCTCGTCTGAAGATTT
GTGATTTTGGATACTCTAAGTCTTCAGTACTACATTCACAGCCAAAATCA
ACTGTTGGTACTCCTGCATATATTGCCCCTGAAGTGTTGCTTAAGAAAGA
ATATGATGGCAAGATTGCAGATGTATGGTCTTGTGGCGTGACTTTATATG
TTATGTTGGTGGGAGCATATCCTTTTGAGGATCCTGAGGAGCCAAAGAAC
TTCCGCAAGACAATACATCGAATTCTAAGTGTTCAGTACTCTATTCCGGA
TTATGTTCATATATCTCCT
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