CX288740

Overview
NameCX288740
Unique NameCX288740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11230 contig Ccv1_Contig11230:700..1218. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: ULK3_HUMAN (Serine/threonine-protein kinase ULK3 OS=Homo sapiens GN=ULK3 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPF 426
            +IV+ K+      ++ ++ME+ +GG+L   I       E  AR F QQL S + + H   + H DLK +N LL     P LK+ DFG+++      +     G+P Y+APE++ +++YD ++ D+WS GV LY  L G  PF
Sbjct:   73 HIVQLKDFQWDSDNIYLIMEFCAGGDLSRFIHTRRILPEKVARVFMQQLASALQFLHERNISHLDLKPQNILLSSLEKPHLKLADFGFAQHMSPWDEKHVLRGSPLYMAPEMVCQRQYDARV-DLWSMGVILYEALFGQPPF 213          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: TSSK6_MOUSE (Testis-specific serine/threonine-protein kinase 6 OS=Mus musculus GN=Tssk6 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 58/135 (42.96%), Postives = 75/135 (55.56%), Query Frame = 1
Query:   43 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 438
            L IVME A+  +L + +   GR    +AR  F Q+   V Y H   + HRDLK EN LL      R+KI DFG+ + +  H  P  +    G+ AY +PEVLL   YD K  DVWS GV LYVM+ G  PF+D +
Sbjct:   86 LYIVME-AAATDLLQAVQRNGRIPGSQARELFSQIAGAVRYLHDHHLVHRDLKCENVLLSPDER-RVKITDFGFGRQA--HGYPDLSTTYCGSAAYASPEVLLGIPYDPKKYDVWSLGVVLYVMVTGCMPFDDSD 216          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SGK1_XENTR (Serine/threonine-protein kinase Sgk1 OS=Xenopus tropicalis GN=sgk1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 56/156 (35.90%), Postives = 85/156 (54.49%), Query Frame = 1
Query:   31 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSI 495
            T + L  +++Y +GGELF  +     F E  ARF+  ++ S + Y HS+ + +RDLK EN LLD      + + DFG  K ++  +   ST  GTP Y+APEVL K+ YD +  D W  G  LY ML G  PF      + +   +++ L ++ +I
Sbjct:  155 TTSRLYFILDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ--GHIILTDFGLCKENIEPNGTTSTFCGTPEYLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNI 307          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: PLK1_XENLA (Serine/threonine-protein kinase PLK1 OS=Xenopus laevis GN=plk1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 64/158 (40.51%), Postives = 86/158 (54.43%), Query Frame = 1
Query:   49 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHISP 519
            +V+E      L E        +E EAR++ +Q ISG  Y HS +V HRDLKL N  L+      +KI DFG +       + K T+ GTP YIAPEVL KK +  ++ D+WS G  +Y +LVG  PF    E    ++T  RI   +YSIP   HI+P
Sbjct:  119 VVLELCRRRSLLELHKRRKAVTEPEARYYLKQTISGCQYLHSNRVIHRDLKLGNLFLNDE--MEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLGKKGHSFEV-DIWSIGCIMYTLLVGKPPF----ETSCLKETYMRIKKNEYSIPK--HINP 267          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: NEK1_DICDI (Probable serine/threonine-protein kinase nek1 OS=Dictyostelium discoideum GN=nek1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 58/167 (34.73%), Postives = 87/167 (52.10%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----FSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPA---------------PRLKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE 441
            N+V+  +      +  I+ME+A  G+LF++I N  R    FS+ E   +F QL+  ++Y HS  + HRD+K +N +L  S +               P LKI DFG SK  S       +T GTP Y++ E+  KK Y  K  D+WS GV LY ++  + PF+  +E
Sbjct:   68 NVVKLNDSFFENGNYVIIMEFAENGDLFQKIENQKRSGKPFSDFEIMHYFCQLVIALNYIHSQNIIHRDIKPKNIVLSSSDSGSGSGSGSGSSNDSIPLLKIADFGVSKLMSETDLYANTTAGTPQYVSYEICNKKPYTNK-TDIWSLGVVLYELMTLSLPFDGRKE 233          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: MYLK2_BOVIN (Myosin light chain kinase 2, skeletal/cardiac muscle OS=Bos taurus GN=MYLK2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 55/161 (34.16%), Postives = 89/161 (55.28%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILS 480
            N+++    I TP  + + MEY  GGELFERI +   + +E +   F +Q+  G+ + H M+V H DLK EN L   +    +KI DFG ++    + + K   GTP +++PEV+   +   K  D+WS GV  Y++L G  PF   ++     +T++ +LS
Sbjct:  368 NLIQLYAAIETPHEIVLFMEYIEGGELFERIVDEDYQLTEVDTMVFVRQICDGILFMHKMRVLHLDLKPENILCVNTTGHLVKIIDFGLARRYNPNEKLKVNFGTPEFLSPEVVNYDQISDK-TDMWSLGVITYMLLSGLSPFLGDDD----TETLNNVLS 523          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: KS6A4_MOUSE (Ribosomal protein S6 kinase alpha-4 OS=Mus musculus GN=Rps6ka4 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 61/149 (40.94%), Postives = 82/149 (55.03%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-SMQVCHRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPA----YIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFE 429
            N+V   EV+    H  +V+E   GGEL E I     FSE EA    + L+S VS+ H    V HRDLK EN L  D +P   +KI DFG+++  +    P   + TP     Y APE+L ++ YD +  D+WS GV LY+ML G  PF+
Sbjct:  465 NVVNLHEVLHDQLHTYLVLELLRGGELLEHIRKKRLFSESEASQILRSLVSAVSFMHEEAGVVHRDLKPENILYADDTPGAPVKIIDFGFAR--LRPQSPAEPMQTPCFTLQYAAPELLAQQGYD-ESCDLWSLGVILYMMLSGQVPFQ 610          

HSP 2 Score: 94.7449 bits (234), Expect = 2.679e-19
Identity = 53/158 (33.54%), Postives = 80/158 (50.63%), Query Frame = 1
Query:   31 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIP 498
            T   L ++++Y SGGE+F  +     F E E R +  +++  + + H + + +RDLKLEN LLD      + + DFG SK  +   + +  S  GT  Y+APE++  K   GK  D WS G+ L+ +L GA PF    E     +   RIL      P
Sbjct:  107 TDAKLHLILDYVSGGEMFTHLYQRQYFKEAEVRVYGGEIVLALEHLHKLGIIYRDLKLENVLLDSE--GHIVLTDFGLSKEFLTEEKERTFSFCGTIEYMAPEIIRSKAGHGKAVDWWSLGILLFELLTGASPFTLEGERNTQAEVSRRILKCSPPFP 262          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: IPL1_KLULA (Spindle assembly checkpoint kinase OS=Kluyveromyces lactis GN=IPL1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 55/157 (35.03%), Postives = 91/157 (57.96%), Query Frame = 1
Query:   49 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHISP 519
            ++MEY   GEL++ + N G  +E  A +F  Q+ + + Y HS  + HRD+K EN L+  +    +K+ DFG+S  +    + K+  GT  Y++PE++  +EY+ K+ DVW+ GV  Y +LVG+ PFE+  +   +R    RIL      P  +++SP
Sbjct:  175 LLMEYVYYGELYKFLKNNGPLNETLASYFVYQMANALDYMHSKNILHRDIKPENILIGFNNT--IKLTDFGWSVYNEDGQKRKTLCGTIDYLSPELIKSREYNNKV-DVWALGVLTYELLVGSPPFEEDTKEMTYR----RILRCDLKFP--LNVSP 322          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: AUR3_ARATH (Serine/threonine-protein kinase Aurora-3 OS=Arabidopsis thaliana GN=AUR3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 59/166 (35.54%), Postives = 88/166 (53.01%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIP 498
            NI+R          + +++EYA GGEL+  +   G  +E +A  +   L   ++YCH   V HRD+K EN LLD     RLKI DFG+S  S   ++ K+  GT  Y+APE++  +++D  + D W+ G+  Y  L G  PFE   +   F+    RIL +  S P
Sbjct:   81 NILRLFGWFHDNERIFLILEYAHGGELYGVLKQNGHLTEQQAATYIASLSQALAYCHGKCVIHRDIKPENLLLDHE--GRLKIADFGWSVQS--SNKRKTMCGTLDYLAPEMVENRDHDYAV-DNWTLGILCYEFLYGNPPFEAESQKDTFK----RILKIDLSFP 237          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: AUKBB_XENLA (Serine/threonine-protein kinase 12-B OS=Xenopus laevis GN=aurkb-B PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 56/169 (33.14%), Postives = 89/169 (52.66%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            NI+R          + +++E+A  GEL++ +   GRF E  +  F ++L   + YCH  +V HRD+K EN L+       LKI DFG+S  +    + ++  GT  Y+ PE++  K +D K+ D+W  GV  Y  LVG  PF+ P   +  R    RI++V    P ++
Sbjct:  159 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALQYCHERKVIHRDIKPENLLM--GYKGELKIADFGWSVHAP-SLRRRTMCGTLDYLPPEMIEGKTHDEKV-DLWCAGVLCYEFLVGMPPFDSPSHSETHR----RIVNVDLKFPPFL 319          
The following BLAST results are available for this feature:
BLAST of CX288740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ULK3_HUMAN5.398e-2035.21Serine/threonine-protein kinase ULK3 OS=Homo sapie... [more]
TSSK6_MOUSE5.398e-2042.96Testis-specific serine/threonine-protein kinase 6 ... [more]
SGK1_XENTR5.398e-2035.90Serine/threonine-protein kinase Sgk1 OS=Xenopus tr... [more]
PLK1_XENLA5.398e-2040.51Serine/threonine-protein kinase PLK1 OS=Xenopus la... [more]
NEK1_DICDI5.398e-2034.73Probable serine/threonine-protein kinase nek1 OS=D... [more]
MYLK2_BOVIN5.398e-2034.16Myosin light chain kinase 2, skeletal/cardiac musc... [more]
KS6A4_MOUSE5.398e-2040.94Ribosomal protein S6 kinase alpha-4 OS=Mus musculu... [more]
IPL1_KLULA5.398e-2035.03Spindle assembly checkpoint kinase OS=Kluyveromyce... [more]
AUR3_ARATH5.398e-2035.54Serine/threonine-protein kinase Aurora-3 OS=Arabid... [more]
AUKBB_XENLA5.398e-2033.14Serine/threonine-protein kinase 12-B OS=Xenopus la... [more]

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Properties
Property NameValue
Genbank descriptionC02003H04SK IF1 Citrus clementina cDNA clone C02003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288740 ID=CX288740; Name=CX288740; organism=Citrus clementina; type=EST; length=519bp
AACATAGTCAGATTCAAGGAGGTCATCTTAACTCCAACCCATCTGGCTAT
TGTGATGGAATATGCTTCCGGAGGAGAGCTCTTTGAGCGGATATGCAATG
CAGGGCGGTTCAGCGAGGACGAGGCACGCTTTTTCTTCCAACAACTTATT
TCTGGAGTGAGCTACTGCCATTCAATGCAAGTATGCCACCGCGACTTGAA
ATTGGAGAATACATTACTGGATGGGAGTCCAGCTCCTCGTCTGAAGATTT
GTGATTTTGGATACTCTAAGTCTTCAGTACTACATTCACAGCCAAAATCA
ACTGTTGGTACTCCTGCATATATTGCCCCTGAAGTGTTGCTTAAGAAAGA
ATATGATGGCAAGATTGCAGATGTATGGTCTTGTGGCGTGACTTTATATG
TTATGTTGGTGGGAGCATATCCTTTTGAGGATCCTGAGGAGCCAAAGAAC
TTCCGCAAGACAATACATCGAATTCTAAGTGTTCAGTACTCTATTCCGGA
TTATGTTCATATATCTCCT
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