CX288740

Overview
NameCX288740
Unique NameCX288740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11230 contig Ccv1_Contig11230:700..1218. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPKA_ARATH (CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana GN=CIPK10 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.618e-32
Identity = 73/156 (46.79%), Postives = 97/156 (62.18%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 459
            N+V   EV+ T T +  VMEY  GGELF ++   G+  +D A  +F QLI+ V +CHS +V HRD+K EN LLD +    LK+ DFG S  +    Q     +T GTPAY+APEV+ +K YDG  AD+WSCGV L+V+L G  PF D    + +RK
Sbjct:   71 NVVELYEVMATKTRIYFVMEYCKGGELFNKVAK-GKLRDDVAWKYFYQLINAVDFCHSREVYHRDIKPENLLLDDNE--NLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYDGTKADIWSCGVVLFVLLAGYLPFHDSNLMEMYRK 223          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: BRSK1_MOUSE (BR serine/threonine-protein kinase 1 OS=Mus musculus GN=Brsk1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.618e-32
Identity = 66/169 (39.05%), Postives = 107/169 (63.31%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            ++++  +V     +L +V+E+ SGGELF+ +   GR +  EAR FF+Q++S + +CHS  +CHRDLK EN LLD      ++I DFG +   V  S  +++ G+P Y  PEV+  ++YDG+ AD+WSCGV L+ +LVGA PF+D     N R+ + ++    + +P ++
Sbjct:   92 HVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLD--EKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDD----DNLRQLLEKVKRGVFHMPHFI 254          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: BRSK1_HUMAN (BR serine/threonine-protein kinase 1 OS=Homo sapiens GN=BRSK1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.618e-32
Identity = 66/169 (39.05%), Postives = 107/169 (63.31%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            ++++  +V     +L +V+E+ SGGELF+ +   GR +  EAR FF+Q++S + +CHS  +CHRDLK EN LLD      ++I DFG +   V  S  +++ G+P Y  PEV+  ++YDG+ AD+WSCGV L+ +LVGA PF+D     N R+ + ++    + +P ++
Sbjct:  108 HVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLD--EKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDD----DNLRQLLEKVKRGVFHMPHFI 270          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.759e-32
Identity = 77/160 (48.12%), Postives = 100/160 (62.50%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 459
            ++V   EV+ + T +   MEY  GGELF+++ + G+  E+ AR +FQQLI  + YCHS  V HRDLK EN LLD +    LKI DFG S       +  +LH+    T GTPAY+APEV+ KK YDG  ADVWSCGV LYV+L G  PF +    + +RK
Sbjct:   71 HVVFLHEVMASKTKIYFAMEYVKGGELFDKV-SKGKLKENIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGD--LKISDFGLSALRESKQQDGLLHT----TCGTPAYVAPEVIGKKGYDGAKADVWSCGVVLYVLLAGFLPFHEQNLVEMYRK 223          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPKE_ARATH (CBL-interacting serine/threonine-protein kinase 14 OS=Arabidopsis thaliana GN=CIPK14 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.759e-32
Identity = 81/175 (46.29%), Postives = 103/175 (58.86%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-------SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDY 504
            +IVR  EV+ T + +  VME+A GGELF ++ + GRF ED +R +FQQLIS V YCHS  + HRDLK EN LLD      LKI DFG S          +LH+      GTPAY+APEVL KK YDG   D+WSCG+ L+V+  G  PF D     N      +I   ++ IP +
Sbjct:   81 SIVRLFEVLATKSKIFFVMEFAKGGELFAKV-SKGRFCEDLSRRYFQQLISAVGYCHSRGIFHRDLKPENLLLDEKLD--LKISDFGLSALTDQIRPDGLLHT----LCGTPAYVAPEVLAKKGYDGAKIDIWSCGIILFVLNAGYLPFND----HNLMVMYRKIYKGEFRIPKW 244          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: CIPK6_ORYSJ (CBL-interacting protein kinase 6 OS=Oryza sativa subsp. japonica GN=CIPK6 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.759e-32
Identity = 78/160 (48.75%), Postives = 94/160 (58.75%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 459
            NIV   EV+ T + + + +E   GGELF RI   GR  ED AR +F+QL+S V +CHS  V HRDLK EN LLD   A  LK+ DFG S          +LH    +  GTP Y APEVL  K YDG  AD+WSCGV LYV+L G+ PF D      +RK
Sbjct:   82 NIVELHEVMATRSKIYLALELVRGGELFGRIVRLGRVREDAARHYFRQLVSAVDFCHSRGVYHRDLKPENLLLD--EAGNLKVVDFGLSALADHARADGLLH----TLCGTPGYAAPEVLRDKGYDGAKADLWSCGVILYVLLAGSLPFPDDNIVTLYRK 235          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: MRKA_DICDI (Probable serine/threonine-protein kinase MARK-A OS=Dictyostelium discoideum GN=mrkA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.604e-32
Identity = 72/169 (42.60%), Postives = 105/169 (62.13%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            NI+R  EVI T   L ++MEYA  GE+ + +   G  +E +AR FF Q++S ++YCHS +  HRDLK EN LLD +   ++KI DFG S      S  K+  G+P Y +PE++L+KEY+G   DVWS GV L+V++ G  PF+      N+ +   +IL+  Y+IP Y+
Sbjct:  168 NIIRLYEVIETSRALYLIMEYAGEGEVMDFMIAHGVLTESQARTFFTQIVSAINYCHSKRAVHRDLKPENLLLDCN--RQIKIIDFGLSNVFTPGSYLKTFCGSPTYASPELILRKEYNGPSVDVWSMGVVLFVLVTGYLPFDG----DNYVELFQKILAGNYTIPSYL 330          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: MARK2_MOUSE (Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 3.604e-32
Identity = 74/169 (43.79%), Postives = 101/169 (59.76%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            NIV+  EVI T   L +VMEYASGGE+F+ +   GR  E EAR  F+Q++S V YCH   + HRDLK EN LLD      +KI DFG+S      ++  +  G+P Y APE+   K+ DG   DVWS GV LY ++ G+ PF+     +N ++   R+L  +Y IP Y+
Sbjct:  111 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD--MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKIDGPEVDVWSLGVILYTLVSGSLPFDG----QNLKELRERVLRGKYRIPFYM 273          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: AAPK1_CAEEL (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Caenorhabditis elegans GN=aak-1 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 3.604e-32
Identity = 76/166 (45.78%), Postives = 96/166 (57.83%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIP 498
            +I R   VI TP+ + +VME  SGGELF  I   G     E+R +FQQ+ISGVSYCH+  + HRDLK EN LLD +    +KI DFG S          +  G+P Y APE++  K Y G   D+WSCGV LY ML G  PF+D   P  F K    I S +Y++P
Sbjct:   83 HITRLFRVISTPSDIFLVMELVSGGELFSYITRKGALPIRESRRYFQQIISGVSYCHNHMIVHRDLKPENLLLDAN--KNIKIADFGLSNYMTDGDLLSTACGSPNYAAPELISNKLYVGPEVDLWSCGVILYAMLCGTLPFDDQNVPTLFAK----IKSGRYTVP 242          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: PAR1_CAEEL (Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 6.147e-32
Identity = 73/169 (43.20%), Postives = 104/169 (61.54%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYV 507
            NIV+  +V+ T   L +V+EYASGGE+F+ +   GR  E EAR  F+Q++S V Y HS  + HRDLK EN LLD      +KI DFG+S +  L ++  +  G+P Y APE+   K+YDG   DVWS GV LY ++ G+ PF+     +N ++   R+L  +Y IP Y+
Sbjct:  228 NIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLLDQD--MNIKIADFGFSNTFSLGNKLDTFCGSPPYAAPELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDG----QNLKELRERVLRGKYRIPFYM 390          
The following BLAST results are available for this feature:
BLAST of CX288740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPKA_ARATH1.618e-3246.79CBL-interacting serine/threonine-protein kinase 10... [more]
BRSK1_MOUSE1.618e-3239.05BR serine/threonine-protein kinase 1 OS=Mus muscul... [more]
BRSK1_HUMAN1.618e-3239.05BR serine/threonine-protein kinase 1 OS=Homo sapie... [more]
CIPKK_ARATH2.759e-3248.13CBL-interacting serine/threonine-protein kinase 20... [more]
CIPKE_ARATH2.759e-3246.29CBL-interacting serine/threonine-protein kinase 14... [more]
CIPK6_ORYSJ2.759e-3248.75CBL-interacting protein kinase 6 OS=Oryza sativa s... [more]
MRKA_DICDI3.604e-3242.60Probable serine/threonine-protein kinase MARK-A OS... [more]
MARK2_MOUSE3.604e-3243.79Serine/threonine-protein kinase MARK2 OS=Mus muscu... [more]
AAPK1_CAEEL3.604e-3245.785'-AMP-activated protein kinase catalytic subunit ... [more]
PAR1_CAEEL6.147e-3243.20Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionC02003H04SK IF1 Citrus clementina cDNA clone C02003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288740 ID=CX288740; Name=CX288740; organism=Citrus clementina; type=EST; length=519bp
AACATAGTCAGATTCAAGGAGGTCATCTTAACTCCAACCCATCTGGCTAT
TGTGATGGAATATGCTTCCGGAGGAGAGCTCTTTGAGCGGATATGCAATG
CAGGGCGGTTCAGCGAGGACGAGGCACGCTTTTTCTTCCAACAACTTATT
TCTGGAGTGAGCTACTGCCATTCAATGCAAGTATGCCACCGCGACTTGAA
ATTGGAGAATACATTACTGGATGGGAGTCCAGCTCCTCGTCTGAAGATTT
GTGATTTTGGATACTCTAAGTCTTCAGTACTACATTCACAGCCAAAATCA
ACTGTTGGTACTCCTGCATATATTGCCCCTGAAGTGTTGCTTAAGAAAGA
ATATGATGGCAAGATTGCAGATGTATGGTCTTGTGGCGTGACTTTATATG
TTATGTTGGTGGGAGCATATCCTTTTGAGGATCCTGAGGAGCCAAAGAAC
TTCCGCAAGACAATACATCGAATTCTAAGTGTTCAGTACTCTATTCCGGA
TTATGTTCATATATCTCCT
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