CX288742
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288742 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 2.552e-37 Identity = 82/158 (51.90%), Postives = 103/158 (65.19%), Query Frame = 3 Query: 21 DGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT-PXXXXXXXXXNQWAFE 488 DGESF+VEE VA + +KH++EDDC IPL NVTG IL+ V+EYCKKHV+ D +++L +WD +F+K +D T+F LILAANYLN++GLL LTCQTVAD IK KTPEE+R+ FNI+NDFT N WAFE Sbjct: 12 DGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVD--DVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167
BLAST of CX288742 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.696e-37 Identity = 82/160 (51.25%), Postives = 105/160 (65.62%), Query Frame = 3 Query: 3 IRHEGCDGESFEVEEAVALESTTIKHMIED-DCADXGIPLPNVTGKILAKVVEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 479 ++ E D + FE+E+ +A S TIK+MIED +D IPLPNVT IL KV++YC+ H + P+ Q +D+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDFTP N+W Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRL--------DDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of CX288742 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.696e-37 Identity = 82/160 (51.25%), Postives = 105/160 (65.62%), Query Frame = 3 Query: 3 IRHEGCDGESFEVEEAVALESTTIKHMIED-DCADXGIPLPNVTGKILAKVVEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 479 ++ E D + FE+E+ +A S TIK+MIED +D IPLPNVT IL KV++YC+ H + P+ Q +D+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDFTP N+W Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRL--------DDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of CX288742 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.685e-36 Identity = 84/179 (46.93%), Postives = 103/179 (57.54%), Query Frame = 3 Query: 21 DGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVE-----VPTTQ-----------------DXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 488 DGESF+VEE VA + + H+IEDDCA IP+PNVTG+ILAKV+EYCKKHVE V T + D +E L WD F+K D T+FD+ILAANYLN++GL DL +T+AD IK TPEE+R+ FNI+NDFTP N W FE Sbjct: 12 DGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAWTFE 190
BLAST of CX288742 vs. ExPASy Swiss-Prot
Match: ASK18_ARATH (SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 8.209e-36 Identity = 78/156 (50.00%), Postives = 99/156 (63.46%), Query Frame = 3 Query: 21 DGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFV-KVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 485 DGESFE++EAVA + I HM+ED+CA IPL NVTG IL+K++EY K HV P+ +D +++L SWD F+ K+D T+F +ILAANYLN +GLL QTVAD IK KTPEE+R+ FNI+NDFTP N W F Sbjct: 12 DGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEPSEEDEDEEA-----------KKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156
BLAST of CX288742 vs. ExPASy Swiss-Prot
Match: ASK5_ARATH (SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.388e-35 Identity = 80/162 (49.38%), Postives = 101/162 (62.35%), Query Frame = 3 Query: 21 DGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQAT-LFDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 488 DG+SFE++E VA +S I HM+ED CA IPL NVT KIL V++YC+KHV+ EEDLK WD DF+K + T LFD+++AANYLNI+ LLDLTC+TV AD++ GKTP+EIR FNI+ND T NQWAF+ Sbjct: 11 DGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVK-------------------SKEEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
BLAST of CX288742 vs. ExPASy Swiss-Prot
Match: ASK17_ARATH (SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.958e-29 Identity = 69/156 (44.23%), Postives = 91/156 (58.33%), Query Frame = 3 Query: 21 DGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 485 D E FE++EAVA + + HMI+DDCAD I L NVTGKILA ++EYCKKHV+ + + +WD +FVK +D TLF L+ AA+YL + GL +L Q +AD KT EIR+ FNI+ND+TP N+WAF Sbjct: 12 DDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKKHVD------------------DVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEWAF 149
BLAST of CX288742 vs. ExPASy Swiss-Prot
Match: SKP1_SCHPO (Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe GN=skp1 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.698e-29 Identity = 67/155 (43.23%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 21 DGESFEVEEAVALESTTIKHMIED-DCADXGIPLPNVTGKILAKVVEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 482 D E F V++ +A S IK+M+ED + IPLPNV+ +L KV+E+C+ H ++ D+ WD F+ VDQ LF+++LA+NYL+IK LLD C+TVA+MI+GK+PE+IRKTFNI NDFTP N+WA Sbjct: 10 DNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHH------KNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
BLAST of CX288742 vs. ExPASy Swiss-Prot
Match: ASK8_ARATH (SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.442e-29 Identity = 66/156 (42.31%), Postives = 92/156 (58.97%), Query Frame = 3 Query: 21 DGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 488 +G++FE+EE A + TI HMIE +C D I + +T +IL V+EYC KH ++DL+ WD +F++ D++T+F L AAN+LN K LL L QTVADMIKG TP+++R+ FNI+ND TP N+WAFE Sbjct: 12 EGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKH---------------HVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152
BLAST of CX288742 vs. ExPASy Swiss-Prot
Match: SKP1_YEAST (Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae GN=SKP1 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 9.414e-24 Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 87 EDDCADXGIPLPNVTGKILAKVVEYCKKHVE--VPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 482 ++D + +P+PNV +L KV+E+ + H + P D + SWD +F+KVDQ L+++ILAANYLNIK LLD C+ VA+MI+G++PEEIR+TFNI NDFTP N+WA Sbjct: 69 DEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRK-----------SAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191 The following BLAST results are available for this feature:
BLAST of CX288742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288742 ID=CX288742; Name=CX288742; organism=Citrus clementina; type=EST; length=636bpback to top |