CX288744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: CCR4C_ARATH (Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 9.594e-54 Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 1 Query: 70 YCRRWYNPLRRK--PFDEPSPDVLRHWIDADPNPISSQ-ERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRE 516 Y RRW NPL R+ P PS + R WID+D P+S ERF+VVSYNILGD N+ HR+LY NV Y+KW RKRLIC+ELI LNPDII MQEVD+YFD+ ++MEKAGYAG YKRRTGDNVDGCAMFWKAD+F +LE+ +IEF +FG+R+ Sbjct: 68 YSRRWQNPLPRRQHPDQIPSSQIARDWIDSDTTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEELIRLNPDIISMQEVDKYFDLFSMMEKAGYAGSYKRRTGDNVDGCAMFWKADRFGVLERENIEFSQFGMRD 219
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: CCR4E_ARATH (Carbon catabolite repressor protein 4 homolog 5 OS=Arabidopsis thaliana GN=CCR4-5 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 1.648e-29 Identity = 60/139 (43.17%), Postives = 92/139 (66.19%), Query Frame = 1 Query: 97 RRKPFDEPSPDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLR 513 RR+ ++ S V R W+ + N + ++ +VSYN+LG NA H DLY NV ++++W+RRK LIC+E+ N I+C+QEVDR+ D+ +++ G+ G +K RTG+ DGCA+FWK + F LL+ IEF +FG+R Sbjct: 71 RRRTKEKISSSVEREWVFSANNFENLADKLVLVSYNLLGVDNASNHMDLYYNVPRKHLEWSRRKHLICKEISRYNASILCLQEVDRFDDLDVLLKNRGFRGVHKSRTGEASDGCAIFWKENLFELLDHQHIEFDKFGMR 209
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: CCR4F_ARATH (Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana GN=CCR4-6 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 3.556e-24 Identity = 57/141 (40.43%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 97 RRKPFDEPSPDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKH-RDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRE 516 R++P +PS R W A P E+F V+SYNIL D A H R LY ++ + W RK + EL + DI+C+QEVD++ D+ M+ GY+ +K RTG+ VDGCA+FW++++F+L+ + SI+F + GLR+ Sbjct: 156 RQRPRSKPSD--YREWEYAKTPPSPGSEKFVVLSYNILADYLANDHWRSLYFHIPRNMLSWGWRKSKLVFELSLWSADIMCLQEVDKFQDLEEEMKHRGYSAIWKMRTGNAVDGCAIFWRSNRFKLVHEESIQFNQLGLRD 294
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: CCR4_CRYNE (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Cryptococcus neoformans GN=CCR4 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.729e-16 Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 118 PSPDVLRHWIDADPN---PISS-QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVD--RYFDILNVM-EKAGYAGCYKRRTGDN---------VDGCAMFWKADKFRLLEQTSIEFKEFGLRE 516 P P R WID + + P S QE FSV++YNIL +F Y + W+ RKRL+ +E++ + D++C+QE+D +Y D M +K GY G + R+ VDGCA FWK +KFRL+E IEF + L++ Sbjct: 363 PPPPPERQWIDLETDVDTPTSGKQESFSVLTYNILCA--SFAPATTYSYTPSWALDWDYRKRLLLEEIVTASADVVCLQEIDCKQYADYFYPMLKKEGYEGQHYPRSRAKTMSVDEQKLVDGCATFWKEEKFRLVETQVIEFNQLALQK 509
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: ANGEL_DROME (Protein angel OS=Drosophila melanogaster GN=angel PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.729e-16 Identity = 52/142 (36.62%), Postives = 77/142 (54.23%), Query Frame = 1 Query: 115 EPSPDVLRHWIDA-------DPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVM---------EKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIE 492 E S D R W DP+ SS F VVSYNIL +H LY + +E++ W RR++ + +EL+ L+PDI+C+QE+ FD L V+ +K Y YK++TG DGCA+ + + KF LL+ ++E Sbjct: 41 ESSHDRNRRWTSLGNQAEGRDPHKCSS---FKVVSYNILAQDLLLEHLFLYVGIPHEFLSWQRRQQNLLRELLKLDPDILCLQEMQ--FDHLPVLVQRLRMGNGKKLAYV--YKKKTGCRTDGCAIVYDSSKFELLDHQAVE 175
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: ANGE1_RAT (Protein angel homolog 1 OS=Rattus norvegicus GN=Angel1 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14 Identity = 51/151 (33.77%), Postives = 79/151 (52.32%), Query Frame = 1 Query: 94 LRRKPFDEPSPDVL-RHWIDADPNPISS--------QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILN-VMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL 510 L+ P + P ++L R W D P + Q +F+++SYNIL + +LY + + + WN R + QE +PDI+C+QEV D Y++ L + G+ YKRRTG DGCA+ +K +FRLL + +E+ GL Sbjct: 203 LQPPPMEIPYHEILWREWEDFSTQPDAQGLEAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGL 353
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: ANGE1_MOUSE (Protein angel homolog 1 OS=Mus musculus GN=Angel1 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14 Identity = 51/151 (33.77%), Postives = 79/151 (52.32%), Query Frame = 1 Query: 94 LRRKPFDEPSPDVL-RHWIDADPNPISS--------QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILN-VMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL 510 L+ P + P ++L R W D P + Q +F+++SYNIL + +LY + + + WN R + QE +PDI+C+QEV D Y++ L + G+ YKRRTG DGCA+ +K +FRLL + +E+ GL Sbjct: 203 LQPPPMEIPYHEILWREWEDFSTQPDAQGLEAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGL 353
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: NOCT_RAT (Nocturnin (Fragment) OS=Rattus norvegicus GN=Ccrn4l PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.268e-13 Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 1 Query: 124 PDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILN-VMEKAGYAG---------CYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLR 513 P R ++D + SS V+ +NIL + +D + E +KW RK LI +E++ PDI+C+QEVD YFD L ++ + GY G C + DGCA+F+ +F+L+ T+I L+ Sbjct: 47 PRYQRDFVDLRTDCSSSHPPIRVMQWNILAQALG-EGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTLQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQSRFKLINSTNIRLTAMTLK 185
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: ANGE1_HUMAN (Protein angel homolog 1 OS=Homo sapiens GN=ANGEL1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.656e-13 Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 136 RHWIDADPNPISS--------QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILN-VMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL 510 R W D P + Q +F+++SYNIL + +LY + + + WN R + QE +PDI+C+QEV D Y++ L + G+ YKRRTG DGCA+ +K +FRLL + +E+ GL Sbjct: 221 REWEDFSTQPDAQGLKAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFVNLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGL 356
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: NOCT_MOUSE (Nocturnin OS=Mus musculus GN=Ccrn4l PE=2 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 2.162e-13 Identity = 43/140 (30.71%), Postives = 69/140 (49.29%), Query Frame = 1 Query: 124 PDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILN-VMEKAGYAG---------CYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLR 513 P R ++D + SS V+ +NIL + +D + E +KW RK LI +E++ PDI+C+QEVD YFD ++ + GY G C + DGCA+F+ ++F+L+ T+I L+ Sbjct: 121 PRYQRDFVDLRTDCSSSHSPIRVMQWNILAQALG-EGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLISSTNIRLTAMTLK 259 The following BLAST results are available for this feature:
BLAST of CX288744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288744 ID=CX288744; Name=CX288744; organism=Citrus clementina; type=EST; length=517bpback to top |