CX288744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: CCR4_ASPFU (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Aspergillus fumigatus GN=ccr4 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11 Identity = 53/156 (33.97%), Postives = 69/156 (44.23%), Query Frame = 1 Query: 91 PLRRKPFDEPSPDVLRHWIDADPNPISSQER---FSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDR------------YFDILNVMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLR 513 PL P PD R WI D SS R +V+SYN L D +A + Y R + W R+ LI EL + DIIC+QE+D+ Y D V G A + VDGCA F+K KF LL++ I F + +R Sbjct: 295 PLTLMAVHLPPPD--RDWIVLDETASSSNHRTDKVTVLSYNTLCDSSATQSHYGYAPARV--LSWEFRRELILNELRSHDSDIICLQEIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKGSKFILLDKQLINFGQTAVR 446
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: CNO6L_MOUSE (CCR4-NOT transcription complex subunit 6-like OS=Mus musculus GN=Cnot6l PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11 Identity = 44/138 (31.88%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 136 RHWIDA-DPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVD--RYFDI-LNVMEKAGYAGCYKRRTG---------DNVDGCAMFWKADKFRLLEQTSIEFKEFGL 510 R WI + + I F+V+ YN+L DK A R LY + W RK+ I +E++ + DII +QEV+ +YF + L ++ GY G + ++ +VDGCA+F+K +KF L+++ ++EF + + Sbjct: 172 RPWITLKERDQILPSASFTVMCYNVLCDKYAT--RQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQYFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAM 307
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: ANGE2_MOUSE (Protein angel homolog 2 OS=Mus musculus GN=Angel2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11 Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 184 FSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRY-FDILNVMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEF 495 FSV+SYNIL + LY++ R + W+ R I +E+ + D++C+QEV D Y +I +E GY YK +TG DGCA+ +K +F LL +EF Sbjct: 167 FSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAICFKHSRFSLLSVNPVEF 273
BLAST of CX288744 vs. ExPASy Swiss-Prot
Match: NOCT_XENLA (Nocturnin OS=Xenopus laevis GN=ccrn4l PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11 Identity = 39/118 (33.05%), Postives = 61/118 (51.69%), Query Frame = 1 Query: 169 SSQER-FSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILN-VMEKAGY---------AGCYKRRTGDNVDGCAMFWKADKFRLLEQTSI 489 S Q R F V+ +NIL + +D + E +KW RK LI +E++ PD++C+QEVD YFD ++ + GY + C + DGCA+F+ D+F+L+ I Sbjct: 94 SQQPRTFRVMQWNILAQALG-EGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQEVDHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFQLVNSAKI 210 The following BLAST results are available for this feature:
BLAST of CX288744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288744 ID=CX288744; Name=CX288744; organism=Citrus clementina; type=EST; length=517bpback to top |