CX288750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288750 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 8.483e-32 Identity = 69/141 (48.94%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 21 RNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKL-----THNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGV 428 R G EATHPD++RA LAEF+ST +FVFAGEGS +A +KL H G NTP N+SGGHVNPAVTF A +GG IS++R I YW+AQL+G+ +ACLLL+ TNG F ++SGV Sbjct: 7 RAYGFGRADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGV 147
BLAST of CX288750 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.447e-31 Identity = 69/141 (48.94%), Postives = 87/141 (61.70%), Query Frame = 3 Query: 9 IMPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG 431 + P R VG +ATHPD +RAA++EFI+T IFVFA EGS ++ K+ H+ +T NISGGHVNPAVTFGA VGG +SL+R +LYW+AQLLG+ A LLL+ T G FAL+SGVG Sbjct: 5 VRPGRRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHD-MSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVG 144
BLAST of CX288750 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.468e-31 Identity = 69/140 (49.29%), Postives = 87/140 (62.14%), Query Frame = 3 Query: 12 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG 431 M R + G EATHPD++RA+LAEF ST IFVFAGEGSG+A K+ + A + ++SGGHVNPAV+FGA +GG IS++R + YWIAQLLGS VA L+L+ VTN S F +S GVG Sbjct: 1 MATRRYSFGRTDEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVG 140
BLAST of CX288750 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 9.379e-31 Identity = 67/139 (48.20%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 15 PIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG 431 P R VG +ATHPD +RAA++EF++T IFVFA EGS ++ KL + +TP NISGGHVNPA+TFGA +GG +SL+R + YW+AQLLG+ VA LLL+ T G FAL+SGVG Sbjct: 8 PGRRFTVGRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKL-YQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVG 145
BLAST of CX288750 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.564e-30 Identity = 67/139 (48.20%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 21 RNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGA--NTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG 431 R VG +ATHPD +RAA++EFI+T IFVFA EGS ++ K+ H+ + +T N+SGGHVNPAVTFGA VGG +SL+R +LYW AQLLG+ A LLL+ T G FAL+SGVG Sbjct: 11 RRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVG 149
BLAST of CX288750 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.017e-29 Identity = 67/136 (49.26%), Postives = 86/136 (63.24%), Query Frame = 3 Query: 27 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGA 434 I VG ++ +L+A L+EFI+TL+FVFAG GS +AF KLT +GA P+ NISGGH+NPAVT G +GGNI+L+ G YWIAQ LGS VACLLL FVTNG++ +S+G+GA Sbjct: 4 IEVGSVGDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLVFVTNGKSVPTHGVSAGLGA 139
BLAST of CX288750 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 8.778e-29 Identity = 65/136 (47.79%), Postives = 87/136 (63.97%), Query Frame = 3 Query: 27 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGA 434 IA G ++ +++A +AEFI+TL+FVFAG GS +A+NKLT + A P+ N+SGGH+NPAVT G VGGNI++L G+ YWIAQ LGSTVACLLLKFVTNG + +++G+ A Sbjct: 4 IAFGSIGDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDA 139
BLAST of CX288750 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.146e-28 Identity = 66/134 (49.25%), Postives = 85/134 (63.43%), Query Frame = 3 Query: 27 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGV 428 IA G ++ +L+A +AEFI+TL+FVFAG GS +A+NKLT + A P+ NISGGH+NPAVT G VGGNI++L G YWIAQLLGSTVACLLLK+VTNG +++G+ Sbjct: 4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGL 137
BLAST of CX288750 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.146e-28 Identity = 66/134 (49.25%), Postives = 85/134 (63.43%), Query Frame = 3 Query: 27 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGV 428 IA G ++ +L+A +AEFI+TL+FVFAG GS +A+NKLT + A P+ NISGGH+NPAVT G VGGNI++L G YWIAQLLGSTVACLLLK+VTNG +++G+ Sbjct: 4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGL 137
BLAST of CX288750 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 7.431e-28 Identity = 64/136 (47.06%), Postives = 85/136 (62.50%), Query Frame = 3 Query: 27 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGA 434 I +G ++ +L+A L+EFI+TL+FVFAG GS +AF KLT + A P+ NISGGH+NPAVT G VGGNI+++ G YWIAQ LGS VACLLL FVTNG++ +++G+GA Sbjct: 4 IEIGSVGDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGA 139 The following BLAST results are available for this feature:
BLAST of CX288750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288750 ID=CX288750; Name=CX288750; organism=Citrus clementina; type=EST; length=435bpback to top |