CX288757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CORJK (50S ribosomal protein L1 OS=Corynebacterium jeikeium (strain K411) GN=rplA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.438e-20 Identity = 54/142 (38.03%), Postives = 77/142 (54.23%), Query Frame = 1 Query: 109 AIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 A K VK + FD TV+ +RL + PRK + +VRGT++LP+G K VR +LIE+I G D + +T M ++ +++++L GLMPNPK GTVT DVA+AV E K G I F++D Sbjct: 26 AAKAVKETSSKNFDATVDVAIRLGVDPRKADQLVRGTVSLPNGTGKEVRVVVFAEGPNATAAEEAGADVVGTAELIEKI-QGGWTDFDAAIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTTDVAKAVAEIKGGKISFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CORDI (50S ribosomal protein L1 OS=Corynebacterium diphtheriae GN=rplA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.438e-20 Identity = 53/159 (33.33%), Postives = 88/159 (55.35%), Query Frame = 1 Query: 58 KPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 K ++K + + + A + VK + D TV+ +RL + PRK + +VRGT++LP+G K+VR +LIE+I ++G ++ + +T M ++ +++++L GLMPNPK GTVTNDVA+A+ E K G I F++D Sbjct: 9 KAAAEKIDKGRLYTPLKAAELVKETSSKNCDATVDVAIRLGVDPRKADQLVRGTVSLPNGTGKSVRVAVFAEGEKATEAQAAGADIVGTTELIEQI-TAGTIEFDVAIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTNDVAKAIAEVKGGKISFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_RHOPB (50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.796e-20 Identity = 49/145 (33.79%), Postives = 79/145 (54.48%), Query Frame = 1 Query: 100 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 L DAIK VK A + FDET+E + L + PR + +VRG + LP+G + +R L+E++ G ++ ++C +T MP + ++ K+L G+MPNPK GTVT D+ AV+ AK G ++F+++ Sbjct: 22 LADAIKMVKERAVSKFDETIEIAINLGVDPRHADQMVRGVVTLPNGTGRTLRVGVFARGAKADEARAAGADVVGAEDLVEKV-QGGTIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKIGTVTMDITNAVKGAKGGSVEFRVE 165
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_FLAJ1 (50S ribosomal protein L1 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=rplA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.796e-20 Identity = 60/159 (37.74%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 58 KPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 K + K E + L DA +K A A FDE+V+ VRL + PRK +VRG + LPHG K V+ +++I G DV+ + M +L + +IL GLMPNPK GTVT DVA+AVQE K G I FK+D Sbjct: 9 KEAASKIEKNKLYSLKDAAALLKVVASAKFDESVDIAVRLGVDPRKANQMVRGVVTLPHGTGKDVKVLALVTPDKEAEAREAGADHVGLDDYLQKI-KDGWTDVDVIITMPAVMGKLGPLGRILGPRGLMPNPKTGTVTMDVAKAVQEVKAGKIDFKVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CORGL (50S ribosomal protein L1 OS=Corynebacterium glutamicum GN=rplA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.796e-20 Identity = 51/156 (32.69%), Postives = 86/156 (55.13%), Query Frame = 1 Query: 67 SKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 ++K ++ + ++A VK + +D +++ +RL + PRK + +VRGT++LP+G K VR +L+E+I G D + +T M ++ +I+++L GLMPNPK GTVTNDVA+A++E K G I F++D Sbjct: 12 AEKIDAGRIYSPLEAANLVKETSSKNYDASIDVAIRLGVDPRKADQLVRGTVSLPNGTGKTVRVAVFAQGEKATEAEAAGADFVGTDELVEKI-QGGWTDFDVAIATPDQMAKIGRIARVLGPRGLMPNPKTGTVTNDVAKAIEEVKGGKISFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CORGB (50S ribosomal protein L1 OS=Corynebacterium glutamicum (strain R) GN=rplA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.796e-20 Identity = 51/156 (32.69%), Postives = 86/156 (55.13%), Query Frame = 1 Query: 67 SKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 ++K ++ + ++A VK + +D +++ +RL + PRK + +VRGT++LP+G K VR +L+E+I G D + +T M ++ +I+++L GLMPNPK GTVTNDVA+A++E K G I F++D Sbjct: 12 AEKIDAGRIYSPLEAANLVKETSSKNYDASIDVAIRLGVDPRKADQLVRGTVSLPNGTGKTVRVAVFAQGEKATEAEAAGADFVGTDELVEKI-QGGWTDFDVAIATPDQMAKIGRIARVLGPRGLMPNPKTGTVTNDVAKAIEEVKGGKISFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_COREF (50S ribosomal protein L1 OS=Corynebacterium efficiens GN=rplA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.796e-20 Identity = 52/144 (36.11%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 103 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 + A + VK + FD +V+ +RL + PRK + +VRGT++LP+G K VR +L+E I G D + +T M ++ +I+++L GLMPNPK GTVTNDVA+A++E K G I F++D Sbjct: 24 LQAAELVKETSSKNFDASVDVAIRLGVDPRKADQLVRGTVSLPNGTGKTVRVAVFAAGEKATEAEAAGADFVGTDELVERI-QGGWTDFDVAIATPDQMAKIGRIARVLGPRGLMPNPKTGTVTNDVAKAIEEVKGGKISFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_RHILO (50S ribosomal protein L1 OS=Rhizobium loti GN=rplA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.569e-20 Identity = 50/145 (34.48%), Postives = 80/145 (55.17%), Query Frame = 1 Query: 100 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 L +A+K +K + FDETVE + L + PR + +VRG +NLP+G ++VR L++ I G +D ++C +T MP + ++ K+L G+MPNPK GTVT DVA AV+ +K G ++F+++ Sbjct: 23 LGEALKLLKDRSSVKFDETVEVAMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGDKAEEAKAAGADIVGAEDLVD-IVQKGTIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTTDVAAAVKASKGGAVEFRVE 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_NOCFA (50S ribosomal protein L1 OS=Nocardia farcinica GN=rplA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.569e-20 Identity = 57/156 (36.54%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 67 SKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 ++K + + + A + K A D TVE VRL + PRK + +VRGT+NLPHG K R LIE I G LD + +T M ++ +I+++L GLMPNPK GTVT DVA+AV + K G I F++D Sbjct: 12 AEKVDRTKLYSPLAAARLAKETATTKTDATVEVAVRLGVDPRKADQMVRGTVNLPHGTGKTARVIVFAAGEKAAEAEAAGADAVGAEDLIERI-QGGWLDFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTTDVAKAVSDIKGGKINFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_MYCGI (50S ribosomal protein L1 OS=Mycobacterium gilvum (strain PYR-GCK) GN=rplA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.569e-20 Identity = 58/159 (36.48%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 58 KPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 K ++K + V ++A K K + D TVE +RL + PRK + +VRGT+NLPHG K R LIE+I G LD + +T M ++ +I++IL GLMPNPK GTVT DV +AV + K G I F++D Sbjct: 9 KEAAEKIDRDRVYSPLEAAKLAKETSSKKQDATVEVAIRLGVDPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKAEAAVAAGADVVGSDDLIEKI-QGGFLDFDAAIATPDQMAKVGRIARILGPRGLMPNPKTGTVTPDVTKAVNDIKGGKINFRVD 166 The following BLAST results are available for this feature:
BLAST of CX288757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288757 ID=CX288757; Name=CX288757; organism=Citrus clementina; type=EST; length=538bpback to top |