CX288757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_GLUOX (50S ribosomal protein L1 OS=Gluconobacter oxydans GN=rplA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.569e-20 Identity = 52/145 (35.86%), Postives = 80/145 (55.17%), Query Frame = 1 Query: 100 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 L +A+ VK+NAKA FDET+E + L I PR + +VRG ++LP+G K +R L E+I +G++D ++C +T M + ++ KIL GLMPNP+ GTVT DV A+ AK G ++++ + Sbjct: 22 LSEAVALVKSNAKAKFDETIEISLNLGIDPRHADQMVRGLISLPNGTGKTLRVGVFARGPKAEEALAAGAEVVGAEDLAEKI-QAGEIDFDRCIATPDMMALVGRLGKILGPRGLMPNPRLGTVTMDVKGAITAAKSGQVEYRAE 165
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CAMC5 (50S ribosomal protein L1 OS=Campylobacter curvus (strain 525.92) GN=rplA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.569e-20 Identity = 57/155 (36.77%), Postives = 82/155 (52.90%), Query Frame = 1 Query: 70 KKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 KK E + +L +AI +K A A FDETVE ++L + PR + +VRG++ LP G K VR +L+E+I G ++ + +T M + K+ +IL GLMPNPK GTVT DVA+AV AK G + F++D Sbjct: 13 KKVEENKIYNLDEAITTIKTLASAKFDETVEIALKLNVDPRHADQMVRGSVVLPAGTGKTVRVAVIAKDAKADEAKAAGADIVGSDELVEDI-QKGIMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_ACIC1 (50S ribosomal protein L1 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=rplA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.569e-20 Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 103 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 ++A++ K TVE +RL + PRK + +VRGT+NLPHG K R +LIE++A+ G LD + +T M ++ ++ +IL GLMPNPK GTVTNDVA+AV + K G I+F++D Sbjct: 23 LEAMRLAKQTNTMRVPATVEVAMRLGVDPRKADQMVRGTVNLPHGTGKTPRVLVFATAERAEEARAAGADYVGADELIEQVAN-GFLDFDAVVATPDLMGKVGRLGRILGPRGLMPNPKTGTVTNDVAKAVADIKSGKIEFRVD 165
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_RHOP2 (50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 50/145 (34.48%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 100 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 L +A+K VK A + FDET+E + L + PR + +VRG + LP+G + VR L+E++ +G ++ ++C +T MP + ++ K+L G+MPNPK GTVT DVA AV+ AK G ++F+++ Sbjct: 22 LDEAVKMVKERAVSKFDETIEVALNLGVDPRHADQMVRGVVMLPNGTGRTVRVGVFARGAKADEAKAAGADVVGAEDLVEQV-QAGNINFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKIGTVTMDVAGAVKGAKGGSVEFRVE 165
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_MYCA9 (50S ribosomal protein L1 OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 55/156 (35.26%), Postives = 81/156 (51.92%), Query Frame = 1 Query: 67 SKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 ++K + + ++A K K + +D TVE +RL + PRK + +VRGT+NLPHG K R LIE I G +D + +T M ++ +I+++L GLMPNPK GTVT DVA+AV + K G I F++D Sbjct: 12 AEKVDREKLYTPLEATKLAKETSSKKYDATVEVAMRLGVDPRKADQMVRGTVNLPHGTGKTARVIVFAVGDKAEAAAAAGADVVGSDDLIERI-QGGWVDFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTPDVAKAVTDIKGGKINFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_HELMI (50S ribosomal protein L1 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 57/157 (36.31%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 64 ESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 ++K + VL+ +A+ VK A A FDETVE RL + PR + ++RG + LPHG K+ + L+E+I G LD + +T M + K+ ++L GLMPNPK GTVT DVARA+QE K G I++++D Sbjct: 11 QAKLVDRDQVLEAREAMDMVKKLATAKFDETVEVAFRLGVDPRHADQMIRGAVVLPHGTGKSRKVAVFAKGDKAKEAEAAGADAVGAEDLVEKI-QGGWLDFDVAVATPDVMGLVGKLGRLLGPKGLMPNPKTGTVTFDVARAIQEIKAGKIEYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CLOTH (50S ribosomal protein L1 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 53/155 (34.19%), Postives = 82/155 (52.90%), Query Frame = 1 Query: 70 KKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 K + + D ++A++ V+ AKA FDETVEAH+RL + R + VRG + LPHG K VR +L+ +I + + + +T M + ++ K+L GLMPNPK GTVT DVA+A+ + K G I++++D Sbjct: 12 KLVDKTKLYDPVEAMELVQKTAKAKFDETVEAHIRLGVDSRHADQQVRGAVVLPHGTGKKVRVLVFAKGEKATEAEKAGADYVGAEELVSKIQNENWFEFDVVVATPDMMGVVGRLGKVLGPKGLMPNPKAGTVTMDVAKAIADIKAGKIEYRLD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CAUCR (50S ribosomal protein L1 OS=Caulobacter crescentus GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 56/142 (39.44%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 109 AIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 AI VKANAKA FDET+E V L + PR + VRG +NLP G + VR L E+IA G +D ++ +T M + ++ K+L GLMPNPK GTVT +VA+AV++AK G ++F+++ Sbjct: 24 AIALVKANAKAKFDETIEISVNLGVDPRHADQQVRGVVNLPSGTGRDVRVAVFAKDAKAAEATAAGAEHVGADDLYEKIAG-GFMDFDRVIATPDMMALVGRLGKVLGPRGLMPNPKVGTVTPNVAQAVKDAKGGAVEFRVE 164
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CAUCN (50S ribosomal protein L1 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 56/142 (39.44%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 109 AIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 AI VKANAKA FDET+E V L + PR + VRG +NLP G + VR L E+IA G +D ++ +T M + ++ K+L GLMPNPK GTVT +VA+AV++AK G ++F+++ Sbjct: 24 AIALVKANAKAKFDETIEISVNLGVDPRHADQQVRGVVNLPSGTGRDVRVAVFAKDAKAAEATAAGAEHVGADDLYEKIAG-GFMDFDRVIATPDMMALVGRLGKVLGPRGLMPNPKVGTVTPNVAQAVKDAKGGAVEFRVE 164
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CAMJR (50S ribosomal protein L1 OS=Campylobacter jejuni (strain RM1221) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 59/160 (36.88%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 55 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +K S+K +S L DAI +K A FDETVE ++L + PR + +VRG++ LP G K VR L+EEI G ++ + +T M + K+ +IL GLMPNPK GTVT DVA+AV AK G + F++D Sbjct: 8 LKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEI-QKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVD 166 The following BLAST results are available for this feature:
BLAST of CX288757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288757 ID=CX288757; Name=CX288757; organism=Citrus clementina; type=EST; length=538bpback to top |