CX288757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CAMJJ (50S ribosomal protein L1 OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 59/160 (36.88%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 55 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +K S+K +S L DAI +K A FDETVE ++L + PR + +VRG++ LP G K VR L+EEI G ++ + +T M + K+ +IL GLMPNPK GTVT DVA+AV AK G + F++D Sbjct: 8 LKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEI-QKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CAMJE (50S ribosomal protein L1 OS=Campylobacter jejuni GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 59/160 (36.88%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 55 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +K S+K +S L DAI +K A FDETVE ++L + PR + +VRG++ LP G K VR L+EEI G ++ + +T M + K+ +IL GLMPNPK GTVT DVA+AV AK G + F++D Sbjct: 8 LKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEI-QKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CAMJD (50S ribosomal protein L1 OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 59/160 (36.88%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 55 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +K S+K +S L DAI +K A FDETVE ++L + PR + +VRG++ LP G K VR L+EEI G ++ + +T M + K+ +IL GLMPNPK GTVT DVA+AV AK G + F++D Sbjct: 8 LKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEI-QKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CAMJ8 (50S ribosomal protein L1 OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 59/160 (36.88%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 55 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +K S+K +S L DAI +K A FDETVE ++L + PR + +VRG++ LP G K VR L+EEI G ++ + +T M + K+ +IL GLMPNPK GTVT DVA+AV AK G + F++D Sbjct: 8 LKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEI-QKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BARHE (50S ribosomal protein L1 OS=Bartonella henselae GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 53/145 (36.55%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 100 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 L DA+ VK A A FDET+E + L + PR + +VRG ++LP+G + VR L E I + G +D ++C +T MP + ++ KIL LMPNPK GTVT DVA AV+ +K G ++F+++ Sbjct: 23 LKDAVSMVKERAIAKFDETIEISMNLGVDPRHADQMVRGVVHLPNGTGRNVRVAVFARGDKAEEAKTAGADIVGAEDLFESI-NGGAIDFDRCIATPDMMPLVGRLGKILGPRNLMPNPKVGTVTLDVANAVKASKGGAVEFRVE 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_THEEB (50S ribosomal protein L1 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19 Identity = 55/154 (35.71%), Postives = 84/154 (54.55%), Query Frame = 1 Query: 73 KKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 K E RP L +A++ +K A A F E+ EAH+RL I P+ T+ +R T+ LP G + +R +LI+EI G++D + +T MP++ K+ +IL GLMP+PK GTVT D+ +A+QE K G ++F+ D Sbjct: 14 KVEDRPYAPL-EALQLLKETATAKFPESAEAHIRLGIDPKYTDQQLRTTVALPKGTGQTIRVAVIARGEKVTEASAAGADVVGSEELIDEI-QKGRMDFDLLIATPDMMPQVAKVGRILGPRGLMPSPKAGTVTFDLPQAIQEFKAGKVEFRAD 165
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_THEAB (50S ribosomal protein L1 OS=Thermosipho africanus (strain TCF52B) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19 Identity = 57/146 (39.04%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 97 DLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 DL +AI K A A FDETVE H++ I RK++ +R T+ LPHG K V+ L E+I LD + +T M + K+ KIL GLMPNPK GTVTNDVA AV+E K+G ++ + D Sbjct: 22 DLNEAIDLAKKVATAKFDETVELHIKTNIDYRKSDQQIRSTIALPHGTGKEVKVLVFATGEKAEEAKAAGADYVGAEDLAEKIQKENFLDFDVAIATPDMMRVIGKLGKILGPRGLMPNPKAGTVTNDVASAVKEFKKGRMEVRTD 167
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_SACEN (50S ribosomal protein L1 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19 Identity = 55/144 (38.19%), Postives = 75/144 (52.08%), Query Frame = 1 Query: 103 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 ++A + K AK D TVE +RL + PRK + +VRGT+NLPHG K R LIE I G LD + +T M ++ KI+++L GLMPNPK GTVT +V +AV + K G I F++D Sbjct: 24 LEAAELAKKTAKVKMDPTVEVAMRLGVDPRKADQMVRGTVNLPHGTGKTARVIVFAVGDKAAEAEAAGADAVGSEDLIERI-QGGWLDFDAAIATPDQMAKVGKIARVLGPRGLMPNPKTGTVTPNVTKAVADIKGGKINFRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_RICPR (50S ribosomal protein L1 OS=Rickettsia prowazekii GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19 Identity = 50/160 (31.25%), Postives = 88/160 (55.00%), Query Frame = 1 Query: 55 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 I+ +K +S + +L +A+ Q+K+ + FD T+E ++L I PR ++ IVRG +NLP G K +R + +I+EI +G+++ + C +T M + +++IL GLMPNPK GTVT D+ A++ AK G ++++ + Sbjct: 16 IREAREKVKSDTLYNLTNAVAQLKSASYVKFDPTLEIVMKLGIDPRHSDQIVRGVVNLPAGTGKTIRVAVICKEEREEEAKSAGADLVGSINIIDEI-KAGQINFDVCIATPDMMSMISSVARILGPKGLMPNPKLGTVTLDIKNAIKNAKSGQVEYRAE 174
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_RHOSR (50S ribosomal protein L1 OS=Rhodococcus sp. (strain RHA1) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19 Identity = 55/144 (38.19%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 103 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 + A K K + + D TVE VRL + PRK + +VRGT+NLPHG K R LIE I G LD + +T M ++ +I+++L GLMPNPK GTVT DV +AV + K G I F++D Sbjct: 24 LQAAKLAKETSSSKMDATVEVAVRLGVDPRKADQMVRGTVNLPHGTGKTARVIVFAVGEKAAEAEAAGADAVGAEDLIERI-QGGWLDFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTADVTKAVADIKGGKINFRVD 166 The following BLAST results are available for this feature:
BLAST of CX288757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288757 ID=CX288757; Name=CX288757; organism=Citrus clementina; type=EST; length=538bpback to top |