CX288757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BACC0 (50S ribosomal protein L1 OS=Bacillus cereus (strain AH820) GN=rplA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.631e-16 Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = 1 Query: 106 DAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +A++ VK A FD TVEA RL + P+K + +RG + LPHG K R I +I G D + +T M + K+ ++L GLMPNPK GTVT DV +AV E K G +++++D Sbjct: 25 EAVELVKKTNTAKFDATVEAAFRLGVDPKKADQQIRGAVVLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDADYIGKI-QQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BACAN (50S ribosomal protein L1 OS=Bacillus anthracis GN=rplA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.631e-16 Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = 1 Query: 106 DAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +A++ VK A FD TVEA RL + P+K + +RG + LPHG K R I +I G D + +T M + K+ ++L GLMPNPK GTVT DV +AV E K G +++++D Sbjct: 25 EAVELVKKTNTAKFDATVEAAFRLGVDPKKADQQIRGAVVLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDADYIGKI-QQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BACAH (50S ribosomal protein L1 OS=Bacillus thuringiensis (strain Al Hakam) GN=rplA PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 6.631e-16 Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = 1 Query: 106 DAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +A++ VK A FD TVEA RL + P+K + +RG + LPHG K R I +I G D + +T M + K+ ++L GLMPNPK GTVT DV +AV E K G +++++D Sbjct: 25 EAVELVKKTNTAKFDATVEAAFRLGVDPKKADQQIRGAVVLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDADYIGKI-QQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BACAC (50S ribosomal protein L1 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.631e-16 Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = 1 Query: 106 DAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +A++ VK A FD TVEA RL + P+K + +RG + LPHG K R I +I G D + +T M + K+ ++L GLMPNPK GTVT DV +AV E K G +++++D Sbjct: 25 EAVELVKKTNTAKFDATVEAAFRLGVDPKKADQQIRGAVVLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDADYIGKI-QQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BACAA (50S ribosomal protein L1 OS=Bacillus anthracis (strain A0248) GN=rplA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.631e-16 Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = 1 Query: 106 DAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +A++ VK A FD TVEA RL + P+K + +RG + LPHG K R I +I G D + +T M + K+ ++L GLMPNPK GTVT DV +AV E K G +++++D Sbjct: 25 EAVELVKKTNTAKFDATVEAAFRLGVDPKKADQQIRGAVVLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDADYIGKI-QQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_MESFL (50S ribosomal protein L1 OS=Mesoplasma florum GN=rplA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.660e-16 Identity = 52/152 (34.21%), Postives = 73/152 (48.03%), Query Frame = 1 Query: 79 ESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 + + V L +AIK K + FD TVE L I PRK + +RG + LP G K + +LI +I + + +T + M +L I K+L GLMPNPK GTVT DVA+A+ E K+G I+F+ D Sbjct: 16 DKQKVYALDEAIKLAKETSTTKFDSTVELSFNLNIDPRKADQQIRGALVLPAGTGKTQKVLVLTNTKVKEAQDAGADFVGGE-ELITKIQKENWFEFDVIVATPEMMAKLGAIGKVLGPKGLMPNPKTGTVTMDVAKAIDEIKKGKIEFRAD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_DESDA (50S ribosomal protein L1 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=rplA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.660e-16 Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 1 Query: 106 DAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 DA+ + A A FDETV+ +RL + P+ ++ +VRG + LP+G K VR L+ E+ +G L+ + +T M + +I ++L GLMPN K G+VT DVA+AV E K G + FK+D Sbjct: 25 DAVGKSLGAAFAKFDETVDVAIRLGVDPKYSDQMVRGAVTLPNGLGKTVRVAVFCKGEKQAEAREAGADIVGAEDLVAEV-KAGNLNFDAAVATPDVMALVGQIGRLLGPRGLMPNAKTGSVTFDVAKAVSELKAGRVDFKVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_CHRSD (50S ribosomal protein L1 OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=rplA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.660e-16 Identity = 50/155 (32.26%), Postives = 76/155 (49.03%), Query Frame = 1 Query: 70 KKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +K ++ V +L DA+ + + F E+VE + L + PRK++ +VRG +P+G K R L EE+ G LD + + M + ++ +IL GLMPNPK GTVT DVA AV+ AK G ++F+ D Sbjct: 13 EKVDTSKVYNLEDAVALLSEVSTVKFKESVEVSINLGVDPRKSDQVVRGATVMPNGTGKDARVAVFAQGAAADAAKEAGADVVGMEDLAEEV-KKGNLDFDVVVAAPDAMRVVGQLGQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVRFRTD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_TERTT (50S ribosomal protein L1 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=rplA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.131e-15 Identity = 52/159 (32.70%), Postives = 77/159 (48.43%), Query Frame = 1 Query: 58 KPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 K ++K + + +A+ +K + F ETV+A + L I PRK++ VRG +LPHG K VR L ++I G +D + + M + + +IL GLMPNPK GTVT DVA AV+ AK G ++F+ D Sbjct: 9 KAINEKVDFNKAYGIDEAVALLKELSTVKFPETVDAAINLGIDPRKSDQAVRGATSLPHGTGKDVRVAVFTQGAAADAAKEAGAEFVGMEDLADQI-KGGMMDFDVVIADPAAMRVVGALGQILGPRGLMPNPKTGTVTPDVAGAVKNAKAGQVRFRAD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_RALEJ (50S ribosomal protein L1 OS=Ralstonia eutropha (strain JMP134) GN=rplA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.131e-15 Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = 1 Query: 106 DAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +A+ VK A A FDE+++ V+L I +K++ +VRG++ LP G K+VR L E++ +G L+ + ++ M + + +IL GLMPNPK GTVT DVA+AV+ AK G ++F++D Sbjct: 25 EALGLVKGCASAKFDESIDVAVQLGIDAKKSDQVVRGSVVLPAGTGKSVRVAVFAQGDKAEAAKAAGADIVGMEDLAEQV-KAGNLNFDVVIASPDTMRIVGTLGQILGPRGLMPNPKVGTVTPDVAQAVKNAKAGQVQFRVD 166 The following BLAST results are available for this feature:
BLAST of CX288757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288757 ID=CX288757; Name=CX288757; organism=Citrus clementina; type=EST; length=538bpback to top |