CX288757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_LISMO (50S ribosomal protein L1 OS=Listeria monocytogenes GN=rplA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.291e-15 Identity = 48/155 (30.97%), Postives = 76/155 (49.03%), Query Frame = 1 Query: 70 KKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 K+ ++ V +A++ K A FD TVE RL + P+K + +RG + LP+G K R + +E+I + G D + +T M + K+ ++L GLMPNPK GTVT DV +AV E K G +++++D Sbjct: 13 KQIDANKVYTAEEAVELAKKIDFAKFDATVEVAFRLGVDPKKADQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGESEFVEKI-NQGWFDFDVIVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVTKAVNEIKAGKVEYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_DECAR (50S ribosomal protein L1 OS=Dechloromonas aromatica (strain RCB) GN=rplA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.291e-15 Identity = 50/159 (31.45%), Postives = 80/159 (50.31%), Query Frame = 1 Query: 58 KPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 K + K ++ + L +A+ K A A FDE+++ V L + RK++ +VRG++ LP G K+VR L E+ +G L+ + +T M + ++ +IL GLMPNPK GTVT DV AV+ AK G ++++ D Sbjct: 9 KALASKVVAQKLYPLQEALTLAKETAIAKFDESIDVAVNLGVDARKSDQVVRGSVVLPAGTGKSVRVAVFAQGEKAEAAKAAGAEVVGFDDLAAEV-KAGNLNFDVVIATPDAMKVVGQLGQILGPRGLMPNPKVGTVTMDVVTAVKNAKAGQVQYRTD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_ACIBY (50S ribosomal protein L1 OS=Acinetobacter baumannii (strain AYE) GN=rplA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.291e-15 Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 1 Query: 79 ESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 E+ V L +A++ + + A F E+++ V L + PRK++ +VRG LP G K VR L E I G LD + + M + K+ IL GLMPNPK GTVT DVA AV+ AK G ++++D Sbjct: 16 EANKVYTLEEAVQVLNSLPAAKFKESLDISVNLGVDPRKSDQVVRGATTLPAGTGKTVRVAVFAQGAQAEAAKEAGADVVGFDDLAESI-QGGNLDFDVVIAAPDAMRVVGKLGTILGPRGLMPNPKVGTVTPDVAGAVKNAKSGQARYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_ACIBT (50S ribosomal protein L1 OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=rplA PE=3 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 3.291e-15 Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 1 Query: 79 ESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 E+ V L +A++ + + A F E+++ V L + PRK++ +VRG LP G K VR L E I G LD + + M + K+ IL GLMPNPK GTVT DVA AV+ AK G ++++D Sbjct: 16 EANKVYTLEEAVQVLNSLPAAKFKESLDISVNLGVDPRKSDQVVRGATTLPAGTGKTVRVAVFAQGAQAEAAKEAGADVVGFDDLAESI-QGGNLDFDVVIAAPDAMRVVGKLGTILGPRGLMPNPKVGTVTPDVAGAVKNAKSGQARYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_ACIBS (50S ribosomal protein L1 OS=Acinetobacter baumannii (strain SDF) GN=rplA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.291e-15 Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 1 Query: 79 ESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 E+ V L +A++ + + A F E+++ V L + PRK++ +VRG LP G K VR L E I G LD + + M + K+ IL GLMPNPK GTVT DVA AV+ AK G ++++D Sbjct: 16 EANKVYTLEEAVQVLNSLPAAKFKESLDISVNLGVDPRKSDQVVRGATTLPAGTGKTVRVAVFAQGAQAEAAKEAGADVVGFDDLAESI-QGGNLDFDVVIAAPDAMRVVGKLGTILGPRGLMPNPKVGTVTPDVAGAVKNAKSGQARYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_ACIB5 (50S ribosomal protein L1 OS=Acinetobacter baumannii (strain AB0057) GN=rplA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.291e-15 Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 1 Query: 79 ESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 E+ V L +A++ + + A F E+++ V L + PRK++ +VRG LP G K VR L E I G LD + + M + K+ IL GLMPNPK GTVT DVA AV+ AK G ++++D Sbjct: 16 EANKVYTLEEAVQVLNSLPAAKFKESLDISVNLGVDPRKSDQVVRGATTLPAGTGKTVRVAVFAQGAQAEAAKEAGADVVGFDDLAESI-QGGNLDFDVVIAAPDAMRVVGKLGTILGPRGLMPNPKVGTVTPDVAGAVKNAKSGQARYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_ACIB3 (50S ribosomal protein L1 OS=Acinetobacter baumannii (strain AB307-0294) GN=rplA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.291e-15 Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 1 Query: 79 ESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 E+ V L +A++ + + A F E+++ V L + PRK++ +VRG LP G K VR L E I G LD + + M + K+ IL GLMPNPK GTVT DVA AV+ AK G ++++D Sbjct: 16 EANKVYTLEEAVQVLNSLPAAKFKESLDISVNLGVDPRKSDQVVRGATTLPAGTGKTVRVAVFAQGAQAEAAKEAGADVVGFDDLAESI-QGGNLDFDVVIAAPDAMRVVGKLGTILGPRGLMPNPKVGTVTPDVAGAVKNAKSGQARYRVD 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_SHEAM (50S ribosomal protein L1 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rplA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.298e-15 Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 1 Query: 70 KKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +K ++ D+ +AI +K A A F E+V+ V L + PRK++ VRG + LPHG + VR L E++ +G+++ + ++ M + + +IL GLMPNPK GTVT +VA AV+ AK G ++++ D Sbjct: 13 EKVDATKAYDINEAITLLKELATAKFVESVDVAVNLGVDPRKSDQNVRGAIVLPHGTGRDVRVAVFTQGANAEAAKEAGAELVGMEDLAEQV-KAGEMNFDVVIASPDAMRVVGMLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRND 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_NOVAD (50S ribosomal protein L1 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rplA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.298e-15 Identity = 49/156 (31.41%), Postives = 81/156 (51.92%), Query Frame = 1 Query: 67 SKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +K +++ + + +AI +K A FDE++E + L + PR + +VRG + LP G K V+ L+E++ +G LD + +T M + ++ K+L GLMPNPK GTVT +VA AV+ AK G I+F+++ Sbjct: 13 TKLGDNQKLYAVDEAIALLKDLKSAKFDESLEVSLNLGVDPRHADQMVRGMVTLPSGTGKDVKVAVFARGDKAEAALAAGADKVGAEDLLEDM-QAGNLDYGRVIATPDMMGIVGRLGKVLGPKGLMPNPKLGTVTPNVAEAVKAAKGGQIEFRVE 167
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_LEPBP (50S ribosomal protein L1 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=rplA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.298e-15 Identity = 49/155 (31.61%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 70 KKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 +K + L +A+ KA + + FD T+E ++ K+ VRGT++LPHG K ++ + LIE++ S G D + C +T M + K+ +L + GLMP PK GTVT DV++AV+E K G I+++ D Sbjct: 12 EKVDRTKAYTLGEAVGLAKATSYSKFDGTLEISTKINY---KSLQNVRGTISLPHGTGKTIKVLVFCKGDKQNEAREAGADFVGDMDLIEKV-SGGWTDFDACVATPDMMKEVGKLGPVLGRKGLMPKPKAGTVTTDVSKAVKELKAGRIEYRPD 162 The following BLAST results are available for this feature:
BLAST of CX288757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288757 ID=CX288757; Name=CX288757; organism=Citrus clementina; type=EST; length=538bpback to top |