CX288757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BRUME (50S ribosomal protein L1 OS=Brucella melitensis GN=rplA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.846e-21 Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 97 DLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VR +L E I + GK++ ++C +T MP + ++ K+L G+MPNPK GTVT DVA AV +K G ++F+++ Sbjct: 22 DLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGDKAEEAKKAGADIVGAEELFE-IVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTTDVAAAVAASKGGAVEFRVE 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BRUMB (50S ribosomal protein L1 OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=rplA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.846e-21 Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 97 DLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VR +L E I + GK++ ++C +T MP + ++ K+L G+MPNPK GTVT DVA AV +K G ++F+++ Sbjct: 22 DLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGDKAEEAKKAGADIVGAEELFE-IVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTTDVAAAVAASKGGAVEFRVE 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BRUC2 (50S ribosomal protein L1 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=rplA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.846e-21 Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 97 DLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VR +L E I + GK++ ++C +T MP + ++ K+L G+MPNPK GTVT DVA AV +K G ++F+++ Sbjct: 22 DLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGDKAEEAKKAGADIVGAEELFE-IVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTTDVAAAVAASKGGAVEFRVE 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BRUAB (50S ribosomal protein L1 OS=Brucella abortus GN=rplA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.846e-21 Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 97 DLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VR +L E I + GK++ ++C +T MP + ++ K+L G+MPNPK GTVT DVA AV +K G ++F+++ Sbjct: 22 DLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGDKAEEAKKAGADIVGAEELFE-IVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTTDVAAAVAASKGGAVEFRVE 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BRUA2 (50S ribosomal protein L1 OS=Brucella abortus (strain 2308) GN=rplA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.846e-21 Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 97 DLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VR +L E I + GK++ ++C +T MP + ++ K+L G+MPNPK GTVT DVA AV +K G ++F+++ Sbjct: 22 DLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGDKAEEAKKAGADIVGAEELFE-IVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTTDVAAAVAASKGGAVEFRVE 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_BRUA1 (50S ribosomal protein L1 OS=Brucella abortus (strain S19) GN=rplA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.846e-21 Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 97 DLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VR +L E I + GK++ ++C +T MP + ++ K+L G+MPNPK GTVT DVA AV +K G ++F+++ Sbjct: 22 DLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGDKAEEAKKAGADIVGAEELFE-IVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTTDVAAAVAASKGGAVEFRVE 166
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_AGRRK (50S ribosomal protein L1 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rplA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.846e-21 Identity = 53/145 (36.55%), Postives = 80/145 (55.17%), Query Frame = 1 Query: 100 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 L AI VK A A FDET+E + L + PR + +VRG +NLP+G ++VR +L+E I GK+D ++C +T MP + ++ K+L G+MPNPK GTVT DV AV+ +K G ++F+++ Sbjct: 21 LTQAIGMVKERAIAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGAKADEAKAAGADIVGAEELVE-IVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTMDVKGAVEASKGGAVEFRVE 164
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_SULSY (50S ribosomal protein L1 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=rplA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.941e-21 Identity = 54/154 (35.06%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 73 KKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 K+++ + + + +K+V+ + FDETVE RL + P+ + +VRG++ LPHG + ++ ++I +IA+ +D + +T MP+L K+ KIL GLMPNPK GTVT DV RAV EAK+G ++FK+D Sbjct: 17 KEKTYSLDEAIQKLKEVEKILQRKFDETVELIFRLGVDPKYADQMVRGSVVLPHGLGRELKVLVIASGEKLKEAEEAGADYAGGEEIINKIANENWIDFDIVIATPDMMPKLAKLGKILGPRGLMPNPKVGTVTTDVKRAVTEAKKGRVEFKVD 170
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_SULNB (50S ribosomal protein L1 OS=Sulfurovum sp. (strain NBC37-1) GN=rplA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.941e-21 Identity = 63/162 (38.89%), Postives = 90/162 (55.56%), Query Frame = 1 Query: 49 LLIKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 LL K ++ K+ S V + M +K++K+ A FDETVE + L + PR + +VRG++ LPHG K VR LIE+I +GK+D + ST M L K++++L GLMPNPK GTVT DVA+AV+ AK G + F++D Sbjct: 12 LLKKVDATKEYS--VDEAMATLKELKS---AKFDETVEVALNLNVDPRHADQMVRGSVVLPHGTGKTVRVAVFAKDAKADEAKAAGADLVGAADLIEDI-QAGKIDFDIVISTPDMMGVLGKVARVLGPKGLMPNPKTGTVTMDVAKAVENAKGGQVNFRVD 167
BLAST of CX288757 vs. ExPASy Swiss-Prot
Match: RL1_RHOS5 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=rplA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.941e-21 Identity = 55/150 (36.67%), Postives = 81/150 (54.00%), Query Frame = 1 Query: 85 RPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRXXXXXXXXXXXXXXXXXXXXXXXLKLIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMD 534 + ++ + DA+ +K A A FDET+E + L + PR + +VRG + LP+G K VR L+E I SGK++ ++C +T MP + ++ KIL LMPNPK GTVT DVA AV AK G ++FK++ Sbjct: 18 KDMVSVEDAVALIKGAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAVFARGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRNLMPNPKVGTVTMDVAGAVGNAKGGEVQFKVE 166 The following BLAST results are available for this feature:
BLAST of CX288757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288757 ID=CX288757; Name=CX288757; organism=Citrus clementina; type=EST; length=538bpback to top |