CX288758
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288758 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.813e-30 Identity = 83/195 (42.56%), Postives = 117/195 (60.00%), Query Frame = 3 Query: 3 NRTLSELRASSSNCSSIGQSY-PNFNTLEKRAINDCLELFHDTIVELKSALNDLSPKKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGN------------VRDVIKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIKR--GFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 542 N+T+S + SSSN S + Q N + + A +DCLEL DT+ +L +A++ L + S H+++ L S AMTN TCLDGFA SD + V + +K SL+NIS HVS+SL ML+ IPG P G++K GFP W+S +DR LLQ V+ TK +L+VA++G+GN+TTI EA+ A Sbjct: 46 NQTISNVNLSSSNFSDLLQRLGSNLSHRDLCAFDDCLELLDDTVFDLTTAISKL---RSHSPELHNVKMLLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLAMLENIPGH--------IP--GKVKEDVGFPMWVSGSDRNLLQDPVDETKVNLVVAQNGTGNYTTIGEAISA 227
BLAST of CX288758 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.559e-25 Identity = 73/189 (38.62%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 3 NRTLSELRASSSNCSSIG-QSYPNFNTLEKRAINDCLELFHDTIVELKSALNDLSPKKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDG-NVRDV-------IKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 542 N T+ ++ +SSN S + + +PN E+ A DCL L DTI +L++A++DL L ++D+ L + MT Q TCLDGF+ SD N D+ +K + +IS ++SNSL ML+ I S+ + P+ + +P+WLS ND++LL+ V T ++L VA DG+GNFTTI +AV A Sbjct: 62 NLTILKVNLASSNFSDLQTRLFPNLTHYERCAFEDCLGLLDDTISDLETAVSDLRSSSL---EFNDISMLLTNVMTYQDTCLDGFSTSDNENNNDMTYELPENLKEIILDISNNLSNSLHMLQVI------SRKKPSPKSSEVDVEYPSWLSENDQRLLEAPVQETNYNLSVAIDGTGNFTTINDAVFA 241
BLAST of CX288758 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.648e-25 Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 3 Query: 69 NFNTLEKRAINDCLELFHDTIVELKSALNDLSP---KKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKKIPGDNM-----SSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 542 N EK A++DCLE +T+ EL A+ DL KK S+H DL+TL S AMTNQ TCLDGF++ D N VRD + ++ + SN+L M+K + +M S+ ++ E + G+P WLS DR+LLQ S ++T +++VA DGSGNF T+ +V A Sbjct: 129 NLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVD-GWPAWLSTGDRRLLQSS-SVTP-NVVVAADGSGNFKTVAASVAA 293
BLAST of CX288758 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.070e-25 Identity = 71/167 (42.51%), Postives = 96/167 (57.49%), Query Frame = 3 Query: 69 NFNTLEKRAINDCLELFHDTIVELKSALNDLSP---KKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKKIPGDNM----SSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 542 N EK A++DCLE +T+ EL A+ DL KK S+H DL+TL S AMTNQ TCLDGF++ D N VRD + ++ + SN+L M+K + +M +S E G+P WLS DR+LLQ S ++T + +VA DGSGNF T+ AV A Sbjct: 129 NLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSS-SVTP-NAVVAADGSGNFKTVAAAVAA 293
BLAST of CX288758 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21 Identity = 64/188 (34.04%), Postives = 104/188 (55.32%), Query Frame = 3 Query: 3 NRTLSELRASSSNCSSIGQSYPNFNTLEKRAINDCLELFHDTIVELKSALNDLS---PKKLPSKHYHDLQTLFSGAMTNQYTCLDGFAY--SDGNVRDVIKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIK-----RGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAV 536 N T+ +R + + ++ EK A++DCLE +T+ EL +A+ DL KK +H DL+TL S A+TNQ TCLDGF++ +D VR V+ ++ + SN+L M+ + +++++ ++ K +P WLS DR+LLQ S D++VA DGSG++ T++EAV Sbjct: 105 NITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMICNMTDTDIANEMKLSAPANNRKLVEDNGEWPEWLSAGDRRLLQSST--VTPDVVVAADGSGDYKTVSEAV 290
BLAST of CX288758 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21 Identity = 70/173 (40.46%), Postives = 90/173 (52.02%), Query Frame = 3 Query: 84 EKRAINDCLELFHDTIVELKSALNDLS--PK-KLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKK-----IPGDNMSSKYEVFPEYGRIK----------RGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 542 E A++DCLE +T+ EL A+ DL PK K KH DL+TL S A+TNQ TCLDGF+Y D + VR + ++ SN+L M+K I + K F K G+P WLS+ DR+LLQ S K D VA DGSG+FTT+ AV A Sbjct: 126 EVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSTFTNNNNRKLKEVTGDLDSDGWPKWLSVGDRRLLQGST--IKADATVADDGSGDFTTVAAAVAA 296
BLAST of CX288758 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 3.447e-20 Identity = 66/181 (36.46%), Postives = 90/181 (49.72%), Query Frame = 3 Query: 84 EKRAINDCLELFHDTIVELKSALNDLS---PKKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKKIPGD---NMSSKYEVFPEYGRIK--------------------RGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 542 EK A++DCLE +T+ EL + DL KK +H DL+TL S A+TNQ TCLDGF++ D + VR + ++ SN+L M+K + N K ++ ++K G+PTWLS DR+LLQ S K D VA DGSG F T+ AV A Sbjct: 123 EKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGSG--VKADATVAADGSGTFKTVAAAVAA 301
BLAST of CX288758 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.020e-16 Identity = 61/179 (34.08%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 93 AINDCLELFHDTIVELKSALNDLSPKKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGNVRDVIKSSLY----------NISRHVSNSLVMLKKIP-GDNMSSKYEV--FPEYGRIKRG----------------FPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 542 A+ DCLEL+ DTI +L + P HD QT S A+ NQ TC +GF RD +S Y N+++ +SNSL + K + ++ KY F ++ + + FP+W L+DRKLL+ S K DL+VAKDGSG++T+I +AV A Sbjct: 103 ALFDCLELYEDTIDQLNHSRRSYGQYSSP----HDRQTSLSAAIANQDTCRNGF-------RDFKLTSSYSKYFPVQFHRNLTKSISNSLAVTKAAAEAEAVAEKYPSTGFTKFSKQRSSAGGGSHRRLLLFSDEKFPSWFPLSDRKLLEDSKTTAKADLVVAKDGSGHYTSIQQAVNA 270
BLAST of CX288758 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.944e-16 Identity = 57/159 (35.85%), Postives = 91/159 (57.23%), Query Frame = 3 Query: 75 NTLEKRAINDCLELFHDTIVELKSALNDLSPKKLPS--KHYHDLQTLFSGAMTNQYTCLDGFAYSDGNVRDVIKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIKRGFPTWLSLNDRKLLQK-SVNLTKFDLIVAKDGSGNFTTITEAVEA 542 N +K AI C L D E ++LN ++ ++ S K DL++ S M+ Q TCLDGF +GN++ +K+S+ + SNSL ++K +N+S +V + + G P+W+S +DR++L+ V K + VAKDGSG+FTTI +A+ A Sbjct: 168 NQDDKDAIEQCKLLVEDAKEETVASLNKINVTEVNSFEKVVPDLESWLSAVMSYQETCLDGF--EEGNLKSEVKTSVNSSQVLTSNSLALIKTFT-ENLSPVMKVVERH--LLDGIPSWVSNDDRRMLRAVDVKALKPNATVAKDGSGDFTTINDALRA 321
BLAST of CX288758 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.957e-15 Identity = 57/163 (34.97%), Postives = 83/163 (50.92%), Query Frame = 3 Query: 93 AINDCLELFHDTIVELKSALN-DLSPKKLPSKHYH---DLQTLFSGAMTNQYTCLDGFAYSDGNVRDVIKSSLYNISRHVSNSLVML---------KKIPGDNMSSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 542 AI DC++L EL ++ SP + DL+T S A++NQ TCLDGF ++G ++ ++ L + V N L M+ K I M+ + F + FP+W+ DRKLLQ N+T D +VA DG+GNFTTI++AV A Sbjct: 80 AIVDCVDLLDSAAEELSWIISASQSPNGKDNSTGDVGSDLRTWISAALSNQDTCLDGFEGTNGIIKKIVAGGLSKVGTTVRNLLTMVHSPPSKPKPKPIKAQTMTKAHSGFSK-------FPSWVKPGDRKLLQTD-NITVADAVVAADGTGNFTTISDAVLA 234 The following BLAST results are available for this feature:
BLAST of CX288758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288758 ID=CX288758; Name=CX288758; organism=Citrus clementina; type=EST; length=542bpback to top |