CX288765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288765 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.862e-11 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 2 Query: 29 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 355 G S FHP G + +G+ + +K+WDV+ + V ++ GH AV + FS +G +LA+A+ D VKLWDL K E S+ + P N ++F + LA SAD Sbjct: 103 GHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMA--ELSEHKGPVNIIEFHPNEYLLASGSAD 210
BLAST of CX288765 vs. ExPASy Swiss-Prot
Match: PRP4_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.431e-11 Identity = 48/167 (28.74%), Postives = 82/167 (49.10%), Query Frame = 2 Query: 26 DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDH-SGSYLAVASADIRVYQVASV--KADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 511 +G G AFH DG + GTG +A ++WD+++ + +GH+ + I+FS NGY++AT + D K+WDLR+ + + + + V F+ G +L + D A + W+ +KT L+G GK + D + IA S DR +++ Sbjct: 361 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPA--HQNLVTGVKFEPIHGDFLLTGAYD----NTAKIWTHPGWSPLKT---LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
BLAST of CX288765 vs. ExPASy Swiss-Prot
Match: RCO1_NEUCR (Transcriptional repressor rco-1 OS=Neurospora crassa GN=rco-1 PE=4 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.175e-11 Identity = 50/179 (27.93%), Postives = 85/179 (47.49%), Query Frame = 2 Query: 50 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF------GLPGNDAPSKS*RILK 559 S F PDG L TG + L+++WD++S+ F GH + ++ FS +G +A+ + D V+LWD+ +N D T +V ++A S D +RV+ + A+ PD V F PD + + GS+D+ ++++ G+P + AP K R +K Sbjct: 349 SVCFSPDGKYLATGAEDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGSGDRTVRLWDIETGQNTSVLSIEDGVT---TVAISPDKQFVAAGSLDKSVRVWDMRGYLAE---RLEGPD-GHKDSVYSVAFSPDGRNLVSGSLDKTIKMWELSAPRGIP-SSAPPKGGRCIK 519
BLAST of CX288765 vs. ExPASy Swiss-Prot
Match: PWP2_SCHPO (Periodic tryptophan protein 2 homolog OS=Schizosaccharomyces pombe GN=SPBC713.04c PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.147e-11 Identity = 43/162 (26.54%), Postives = 80/162 (49.38%), Query Frame = 2 Query: 38 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517 + ++ + DG + TG + +K+WD+ S + F H AV+ + FS+ G L +++ DG V+ WDL + +NFR+F ++ S + + D SG + S D + SV+ + L+G G + + F +A GS D+ +R++ + Sbjct: 340 DALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTF-TAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTG----QLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDI 496
BLAST of CX288765 vs. ExPASy Swiss-Prot
Match: TUP12_SCHPO (Transcriptional repressor tup12 OS=Schizosaccharomyces pombe GN=tup12 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.074e-11 Identity = 49/169 (28.99%), Postives = 79/169 (46.75%), Query Frame = 2 Query: 50 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKAT-CVKFGPDAKYIAVGSMDRNLRVFGLP--GNDAPS 538 S AF PDG L TG + ++IWD+ + GH + ++ FS++G L + + D V LWD+ + + D T +V F G ++A S D IR++ + + L G ++ V F PD KY+ GS+D ++++ L N APS Sbjct: 339 SVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVT---TVMFSPDGQFIAAGSLDKVIRIWTSSGTLVE--------QLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPS 496
BLAST of CX288765 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 41/164 (25.00%), Postives = 80/164 (48.78%), Query Frame = 2 Query: 29 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 511 G G + A+ D +L +G+ + +K+W++ + ++ GH V +F+ + + + D V++WD+R K ++ + P ++V F+ GS + +S D R++ AS C+KT D + VKF P+ KYI ++D L+++ Sbjct: 112 GHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDTAS----GQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 268
BLAST of CX288765 vs. ExPASy Swiss-Prot
Match: WD51A_BOVIN (WD repeat-containing protein 51A OS=Bos taurus GN=WDR51A PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 2 Query: 53 AAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 511 A F PDG ++ + + + VK+WD S+ V + H G VT + F +G +A A D VK+WD+R + + ++ + N++ F SG+YL AS+D + + ++ + L G G AT V F +Y A G D + V+ Sbjct: 151 AKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSA--AVNALSFHPSGNYLVTASSDSTLKILDLMEG-----RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
BLAST of CX288765 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 44/158 (27.85%), Postives = 78/158 (49.37%), Query Frame = 2 Query: 56 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKAT-CVKFGPDAKYIAVGSMDRNLRVFGL 517 AF PDG L TGT + +K+WD+ +Q F GH + ++ FS NG ++ + + D +LWD+ + E + T ++ + ++AV S D IRV+ V+ + L G ++ + F PD+ + GS+D+ ++V+ L Sbjct: 367 AFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVT---AIAISPNDQFIAVGSLDQIIRVWSVSGTLVE--------RLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWEL 513
BLAST of CX288765 vs. ExPASy Swiss-Prot
Match: PWP2_HUMAN (Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 47/165 (28.48%), Postives = 80/165 (48.48%), Query Frame = 2 Query: 29 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517 G + A+ PDG + TG + VK+W+ S F H VT ++F+ GY + T++ DG V+ +DL + +NFR+F +S T + V D SG ++ + D V S++ + LSG G + + F P +A S D+ +R++ + Sbjct: 371 GHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSSGVTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTF-TSPRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQTG----RLLDVLSGHEGPISGLCFNPMKSVLASASWDKTVRLWDM 530 The following BLAST results are available for this feature:
BLAST of CX288765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288765 ID=CX288765; Name=CX288765; organism=Citrus clementina; type=EST; length=559bpback to top |