CX288780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG2_YEAST (Glycyl-tRNA synthetase 2 OS=Saccharomyces cerevisiae GN=GRS2 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.244e-26 Identity = 64/143 (44.76%), Postives = 86/143 (60.14%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVI 425 +H R + P+VIEPSFG+GRIIYC+++H F R E F FP +APIK V + N + + K IS L+ I KID + TSIGK+YAR DELG PF IT+D +VT+RER+S Q+R ++ + S I Sbjct: 455 QHIREYIPNVIEPSFGLGRIIYCIFDHCFQVR---VDSESRGFFSFPLQIAPIKVFVTTISNNDGFPAILKRISQALRKREIYFKIDDSNTSIGKKYARNDELGTPFGITIDFETIKDQTVTLRERNSMRQVRGTITDVISTI 594
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_ENCCU (Glycyl-tRNA synthetase OS=Encephalitozoon cuniculi GN=ECU10_1790 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.618e-26 Identity = 63/146 (43.15%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIKAVTDGQTKW 455 P VIEPSFGIGRI+Y L EHSFY R ++ VFRF P +AP++C + L+ ++ E I L G+ ++ SIG++Y+ DELG+PF IT D VTIRERDS QIRV V++ S++ GQ++W Sbjct: 438 PDVIEPSFGIGRILYALIEHSFYLR-----EDSRPVFRFKPAIAPVQCAIGYLIHFDEFNEHILNIKRFLTDNGLVVHVNERSCSIGRKYSSCDELGIPFFITFDPDFLKDRMVTIRERDSMQQIRVDVEKCPSIVLEYIRGQSRW 578
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_METM5 (Glycyl-tRNA synthetase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=glyS PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.287e-23 Identity = 61/137 (44.53%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIK 428 P VIEPS+GI RI YC+ EH+F DE V F V+PIK VFPLV + E+A + L+ G+ + D +G +IG+RY R DE+G PF +T+D + SSVTIRERDS++Q R+ ++E IK Sbjct: 442 PHVIEPSYGIDRITYCVMEHAF------KEDEDRTVMGFSNAVSPIKVGVFPLVNKEGMPEIAMDLKNKLRENGLIAEYDDSG-AIGRRYMRMDEVGTPFCVTIDGETLTDSSVTIRERDSREQFRIPINEVVPYIK 571
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_METJA (Glycyl-tRNA synthetase OS=Methanocaldococcus jannaschii GN=glyS PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.287e-23 Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIK 428 P VIEPS+GI RI YCL EHS+ +E P +APIK V PLV ++AK I +L+ GI + D +G +IG+RY R DE+GVPF ITVD + +VT+RER++++Q+RV +DE +K Sbjct: 443 PHVIEPSYGIDRITYCLLEHSY------REEEDRVYLDLKPSIAPIKAYVLPLVNKDDMPKIAKEIEQMLRENGIIAEYDDSG-AIGRRYMRADEIGVPFCITVDGQTLEDRTVTVRERNTREQVRVKIDELVDYLK 572
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_METMP (Glycyl-tRNA synthetase OS=Methanococcus maripaludis GN=glyS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.867e-23 Identity = 61/137 (44.53%), Postives = 82/137 (59.85%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIK 428 P VIEPS+GI RI YC+ EH+F DE V F V+PIK VFPLV + E+A + L+ G+ + D +G +IG+RY R DE+G PF IT+D + SVTIRERDS++Q R+ ++E IK Sbjct: 442 PHVIEPSYGIDRITYCVMEHAF------KEDEDRTVMGFSNAVSPIKVGVFPLVNKEGMPEIAMDLKNKLRENGLIAEYDDSG-AIGRRYMRMDEVGTPFCITIDGETLKDRSVTIRERDSREQFRIPINEVVPYIK 571
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_METM7 (Glycyl-tRNA synthetase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=glyS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.867e-23 Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIK 428 P VIEPS+GI RI YC+ EH+F +E V F V+PIK VFPLV + E+A + L+ G+ + D +G +IG+RY R DE+G PF +T+D + SVTIRERDS++Q R+ ++E S IK Sbjct: 442 PHVIEPSYGIDRITYCVMEHAF------KEEEDRTVMGFSNAVSPIKVGVFPLVNKEGMPEIAMDLKNKLRENGLIAEYDDSG-AIGRRYMRMDEVGTPFCVTIDGETLTDRSVTIRERDSREQFRIPINEVVSYIK 571
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_METTP (Glycyl-tRNA synthetase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=glyS PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.890e-23 Identity = 58/142 (40.85%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIKAVTDG 443 P VIEPSFGI RI+Y + EHS++ P + DE V RF P ++PI + PL+ + E A+ I + G+ + D +G SIG+RY R DE+G P+ ITVD +VT+R+RD+ QIR+ D A +I+ + G Sbjct: 426 PHVIEPSFGIDRILYTVLEHSYHEEPVE--DEMRVVLRFLPGISPIDVAILPLMDKDELVEPARRIFDEFRRCGMLAEFDTSG-SIGRRYRRNDEIGTPYCITVDYQTLEDGTVTVRDRDTMQQIRIEADRAVDIIRDLMSG 564
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_METM6 (Glycyl-tRNA synthetase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=glyS PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 6.387e-23 Identity = 61/137 (44.53%), Postives = 82/137 (59.85%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDS----TSSVTIRERDSKDQIRVSVDEAASVIK 428 P VIEPS+GI RI YC+ EH+F +E V F V+PIK VFPLV + E+A + L+ G+ + D +G +IG+RY R DE+G PF IT+D +SVTIRERDS+ Q R+ ++E S IK Sbjct: 442 PHVIEPSYGIDRITYCVMEHAF------KEEEDRTVMGFSNAVSPIKVGVFPLVNKEGMPEIAMDLKNKLRENGLIAEYDDSG-AIGRRYMRMDEVGTPFCITIDGETLVDNSVTIRERDSRAQFRIPINEVVSYIK 571
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_METTH (Glycyl-tRNA synthetase OS=Methanobacterium thermoautotrophicum GN=glyS PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.089e-22 Identity = 61/137 (44.53%), Postives = 80/137 (58.39%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIK 428 P VIEPSFGI RIIY L HS D + FR PP VAP++ TV PLV ++ A I L+ +G + D +GT IG+RYAR DE+GVPFA+TVD +VT+R RD Q+RV ++E ++ Sbjct: 432 PHVIEPSFGIDRIIYTLLLHSL------VDDGERTYFRLPPHVAPVEVTVLPLVNREEMVMTALEIERNLRRSGFIAEFDSSGT-IGRRYARADEIGVPFAVTVDHETLEDGTVTLRNRDDCSQVRVKIEELVPTLE 561
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_METVS (Glycyl-tRNA synthetase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=glyS PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 7.061e-22 Identity = 58/137 (42.34%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIK 428 P VIEPS+GI RI YC+ EH+F K D++ + F V+P+K VFPLV + +E+A+ + + GI + D +G +IG+RY R DE+G PF +TVD ++VTIRERDS++Q R+ +D IK Sbjct: 442 PHVIEPSYGIDRITYCVIEHAF-----KEEDDR-TLLAFVNTVSPVKVGVFPLVNKEGMDEIAENLKNKFRKNGIIAEYDDSG-AIGRRYMRMDEIGTPFCVTVDGETLKDNTVTIRERDSREQFRIPLDGVVDYIK 571 The following BLAST results are available for this feature:
BLAST of CX288780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288780 ID=CX288780; Name=CX288780; organism=Citrus clementina; type=EST; length=510bpback to top |