CX288780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_UREPA (Glycyl-tRNA synthetase OS=Ureaplasma parvum GN=glyQS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.294e-11 Identity = 49/142 (34.51%), Postives = 75/142 (52.82%), Query Frame = 3 Query: 6 KEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS-------SVTIRERDSKDQIRVSVDE 410 +E ++ + P VIEPS G+ R++Y + + + A DE + +AP K V PLV N+ E+ V + +L + IS D +G SIGKRY R D +G + IT+D S + TIRER++ Q R+ + E Sbjct: 317 EETKQKYIPHVIEPSVGVERLLYAILTEATFIE-KLANDEDRILMNLKYDLAPYKIAVMPLV-NKLKEKAEAVYNKILDL-NISVTFDNSG-SIGKRYRRQDAIGTIYCITIDYDSFGDEHDPTFTIRERNTMAQKRIKLSE 454
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_UREP2 (Glycyl-tRNA synthetase OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=glyQS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.294e-11 Identity = 49/142 (34.51%), Postives = 75/142 (52.82%), Query Frame = 3 Query: 6 KEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS-------SVTIRERDSKDQIRVSVDE 410 +E ++ + P VIEPS G+ R++Y + + + A DE + +AP K V PLV N+ E+ V + +L + IS D +G SIGKRY R D +G + IT+D S + TIRER++ Q R+ + E Sbjct: 317 EETKQKYIPHVIEPSVGVERLLYAILTEATFIE-KLANDEDRILMNLKYDLAPYKIAVMPLV-NKLKEKAEAVYNKILDL-NISVTFDNSG-SIGKRYRRQDAIGTIYCITIDYDSFGDEHDPTFTIRERNTMAQKRIKLSE 454
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_UREU1 (Glycyl-tRNA synthetase OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=glyQS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11 Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS-------SVTIRERDSKDQIRVSVDE 410 + P VIEPS G+ R++Y + + + + DE++ + +AP K V PLV N+ ++ ++ +L + IS D +G SIGKRY R D +G + +T+D S S TIRER+S Q R+ + E Sbjct: 323 YVPHVIEPSVGVERLLYAILTEATFIEKLENDDERI-LMDLKYDLAPYKIAVMPLV-NKLKDKAEEIYGKILDL-NISATFDNSG-SIGKRYRRQDAIGTIYCLTIDFDSLDDQQDPSFTIRERNSMAQKRIKLSE 454
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_GEOTN (Glycyl-tRNA synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glyQS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11 Identity = 49/145 (33.79%), Postives = 68/145 (46.90%), Query Frame = 3 Query: 6 KEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQN------QQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 +E + P IEPS G R+ ++ + G + V P +AP K V PL + + YEE+AK D TG SIGKRY R DE+G PF IT D S VT+R+RD+ +Q+R+ + E Sbjct: 322 QETNERYIPYCIEPSLGADRVTLAFMIDAYDEEELEDGTTR-TVMHLHPALAPYKAAVLPLSKKLGDGARRIYEELAKHFMV---------DYDETG-SIGKRYRRQDEIGTPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGE 455
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_GEOKA (Glycyl-tRNA synthetase OS=Geobacillus kaustophilus GN=glyQS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11 Identity = 46/145 (31.72%), Postives = 72/145 (49.66%), Query Frame = 3 Query: 6 KEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIK 428 +E + P IEPS G R+ ++ + G + V P +AP K V PL + + ++ L+K + + D TG SIGKRY R DE+G PF IT D S VT+R+RD+ +Q+R+ + E + ++ Sbjct: 316 QETNERYIPYCIEPSLGADRVTLAFMIDAYDEEELEDGTTR-TVMHLHPALAPYKAAVLPL-SKKLADGAHRIYEELVKHFMVDY--DETG-SIGKRYRRQDEIGTPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGELKAFLE 455
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_ALKMQ (Glycyl-tRNA synthetase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glyQS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11 Identity = 45/133 (33.83%), Postives = 68/133 (51.13%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDE 410 + P IEPS G R+ ++ D ++ V + P +AP K V PL + + E+ ++ L I + D G SIGKRY R DE+G P+ IT D + VT+R+RD+ +Q RV++DE Sbjct: 324 YVPYCIEPSLGADRVTLAFLVDAYEEEQIDEKDSRI-VLKLHPALAPFKAAVLPLTKKLK-EQSLELFEKLSDKFMIDY--DDAG-SIGKRYRRHDEIGTPYCITYDFDTLEDNCVTVRDRDTMEQQRVAIDE 451 The following BLAST results are available for this feature:
BLAST of CX288780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288780 ID=CX288780; Name=CX288780; organism=Citrus clementina; type=EST; length=510bpback to top |