CX288780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_ARCFU (Glycyl-tRNA synthetase OS=Archaeoglobus fulgidus GN=glyS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 8.632e-20 Identity = 56/137 (40.88%), Postives = 78/137 (56.93%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIK 428 P VIEPSFG+ RI Y + EH+F E+ V R V+PI+ V PL+ + +E I +L+ GI D +G SIG+RY R DE+G PF +TVD +VTIR+RD+ Q+RV + E S++K Sbjct: 418 PHVIEPSFGLDRITYSVLEHAF--DKDVVDGEERRVLRLKRWVSPIEVAVLPLLSREPFESKGMEIVQMLREEGIFTDYDDSG-SIGRRYRRFDEIGTPFCVTVDHQTFEDETVTIRDRDTTAQVRVKLGELPSILK 551
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_AERPE (Glycyl-tRNA synthetase OS=Aeropyrum pernix GN=glyS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.246e-18 Identity = 56/159 (35.22%), Postives = 88/159 (55.35%), Query Frame = 3 Query: 3 KKEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQN-QQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIKAVTDGQTKWEDV 464 +K R F P V+EPSFG R +Y E+++ + V FP +AP++ V PLV+N ++ E A+++ L AG + D +G SIG+RYAR DE+GVP A+T+D +VT+R+RD+ Q+R+ DE ++ + ED+ Sbjct: 426 EKVSGRRFVPHVVEPSFGTDRNVYVALEYAYREVEGRV------VLAFPRDIAPVQAVVLPLVENDEKLVERARMVYETLVEAGFTVYYDDSG-SIGRRYARADEIGVPAAVTIDYQTLEDGTVTLRDRDTWRQVRIGADEVVDKLRRFIYDGARLEDL 577
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_MESFL (Glycyl-tRNA synthetase OS=Mesoplasma florum GN=glyQS PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.055e-17 Identity = 53/138 (38.41%), Postives = 84/138 (60.87%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIKA 431 P VIEPS G+ R++ + +++ G+ ++ V + P +AP + V PL Q QQ ++ + S LL +++ D TG ++GKRY R D +G PF ITVD T+SVT+RERDS +Q+R+++DE + +KA Sbjct: 317 PHVIEPSVGVERMMLAILWQAYHEEDLGEGNSRI-VMKLPYNLAPYQIAVMPL-QKQQNDQAQALYSNLLNNFDVTY--DETG-NVGKRYRRQDAIGTPFVITVDFDTPETNSVTVRERDSMEQVRINLDELEAYLKA 449
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_THEGJ (Glycyl-tRNA synthetase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=glyS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.800e-17 Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDST----SSVTIRERDSKDQIRVSVDEAASVIKAVTDGQ 446 P V+EPSFGI R Y L E+S +E + +API+ V PLV + + +A I L+ AG D T IG+RY R DE+G P+ +T+D+ S+VTIR+RD+++Q+RVS++E S ++ + G+ Sbjct: 435 PHVLEPSFGIDRPFYLLLENSLVI------EEDRTYLKLKKDMAPIEVAVLPLVAKEPLKSIAYEIFRKLQKAGFIVVYDEKDT-IGRRYLRYDEIGTPYCVTIDNQTPEDSTVTIRDRDTREQVRVSIEELPSKLRELIFGE 570
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_THET8 (Glycyl-tRNA synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glyQS PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 4.010e-17 Identity = 54/149 (36.24%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQ-QYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS-------------SVTIRERDSKDQIRVSVDEAASVIK 428 F P VIEPS G+ R + L +F G+E++ V + P +APIK V PLV+N+ + E AK + L G+ + +IGK Y R DE+G PFA+TVD + +VT+R+RD+ +QIR+ VDE ++ Sbjct: 354 FVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERI-VLKLKPQLAPIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLR 501
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_THET2 (Glycyl-tRNA synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glyQS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.010e-17 Identity = 54/149 (36.24%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQ-QYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS-------------SVTIRERDSKDQIRVSVDEAASVIK 428 F P VIEPS G+ R + L +F G+E++ V + P +APIK V PLV+N+ + E AK + L G+ + +IGK Y R DE+G PFA+TVD + +VT+R+RD+ +QIR+ VDE ++ Sbjct: 354 FVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERI-VLKLKPQLAPIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLR 501
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_LEPIC (Glycyl-tRNA synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=glyQS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.839e-17 Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAK-VISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDE 410 + P V+EP+ G+ R+ + ++ G+ + V RF P +AP+K VFPL++ E ++ + + L K+ I + G +IGKRY R DE+G PF ITVD ++VT+RERDS Q R++V++ Sbjct: 326 YVPFVVEPALGVNRLFLAVVTDAYEEEKLPDGETR-TVLRFSPKIAPVKAAVFPLMKKDGLPEKSREIFADLSKLGNIEYD---DGGAIGKRYRRQDEIGTPFCITVDYDTLKDNTVTVRERDSMSQERIAVNQ 455
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_THESM (Glycyl-tRNA synthetase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=glyS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.933e-17 Identity = 54/152 (35.53%), Postives = 82/152 (53.95%), Query Frame = 3 Query: 3 KKEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVF-RFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDS----TSSVTIRERDSKDQIRVSVDEAASVIKAVTDG 443 +K H P V+EPSFGI R Y L E+S DE V+ + +API+ V PLV + +A I L+ G D T +G+RYAR DE+G P+ +T+D+ ++VTIR+RD+++QIRV ++E ++ + G Sbjct: 426 EKVHGEKLVPHVLEPSFGIDRPFYLLLENSIVM------DEDSRVYLKIKKDMAPIEVAVLPLVAKEPLTSIAYEIFRTLQKEGFIVVYDEKDT-VGRRYARYDEIGTPYCVTIDNQTPEDNTVTIRDRDTREQIRVKIEELPEKLRELIFG 570
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_LEPIN (Glycyl-tRNA synthetase OS=Leptospira interrogans GN=glyQS PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.167e-16 Identity = 47/134 (35.07%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAK-VISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDE 410 + P V+EP+ G+ R+ + ++ G+ + V RF P +AP+K +FPL++ E ++ + + L K+ I + G +IGKRY R DE+G PF ITVD +VT+RERDS Q R++V++ Sbjct: 326 YVPFVVEPALGVNRLFLAVVTDAYEEEKLPDGETR-TVLRFSPKIAPVKAAIFPLMKKDGLPEKSREIFADLSKLGNIEYD---DGGAIGKRYRRQDEIGTPFCITVDYDTLKDDTVTVRERDSMSQERIAVNQ 455
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_LEPBL (Glycyl-tRNA synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=glyQS PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.790e-16 Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQY-EEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSV 404 + P V+EP+ G+ R+ + ++ G+ + V RF P +AP+K VFPL++ E+ ++ + L K+ I + D +G +IGKRY R DE+G PF ITVD +VT+RERDS Q RVSV Sbjct: 326 YVPFVVEPALGVNRLFLAVVTDAYQEEKLPDGEIR-TVLRFSPKIAPVKVAVFPLMKKDGLLEKSREIFADLSKLGNIEY--DDSG-AIGKRYRRQDEIGTPFCITVDYDTLKDDTVTVRERDSMAQERVSV 453 The following BLAST results are available for this feature:
BLAST of CX288780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288780 ID=CX288780; Name=CX288780; organism=Citrus clementina; type=EST; length=510bpback to top |