CX288780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_LEPBJ (Glycyl-tRNA synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=glyQS PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.790e-16 Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQY-EEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSV 404 + P V+EP+ G+ R+ + ++ G+ + V RF P +AP+K VFPL++ E+ ++ + L K+ I + D +G +IGKRY R DE+G PF ITVD +VT+RERDS Q RVSV Sbjct: 326 YVPFVVEPALGVNRLFLAVVTDAYQEEKLPDGEIR-TVLRFSPKIAPVKVAVFPLMKKDGLLEKSREIFADLSKLGNIEY--DDSG-AIGKRYRRQDEIGTPFCITVDYDTLKDDTVTVRERDSMAQERVSV 453
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_CLOAB (Glycyl-tRNA synthetase OS=Clostridium acetobutylicum GN=glyQS PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.790e-16 Identity = 53/133 (39.85%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDE 410 + P VIEPS G R+ ++ + GD+++ V F P +APIK V PL + E+ V S + I + D TG SIGKRY R DE+G P+ ITVD +VTIR+RDS Q+RV ++E Sbjct: 325 YVPYVIEPSLGADRVALAFLIDAYDEEELEGGDQRI-VLHFHPQIAPIKAAVLPLSKKLS-EKALDVYSKISSKFNIEY--DETG-SIGKRYRRQDEIGTPYCITVDFDTLEDEAVTIRDRDSMSQVRVKIEE 452
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_CLOTE (Glycyl-tRNA synthetase OS=Clostridium tetani GN=glyQS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 7.562e-16 Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVI 425 E + P IEPS G R+ ++ GD + V R P +AP K + PL + + ++ +V S L K + + D GT IGKRY R DE+G P+ IT+D ++VTIR+RDS DQIR+++DE I Sbjct: 320 ETNEKYLPYCIEPSLGADRVALAFLVDAYDEEELDGGDSR-TVLRLHPALAPFKAAILPLTKKLK-DKSLEVYSMLSKYFNVDY--DEAGT-IGKRYRREDEIGTPYCITIDYDTLEDNTVTIRDRDSMDQIRINIDELVKYI 457
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STRAW (Glycyl-tRNA synthetase OS=Streptomyces avermitilis GN=glyQS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.876e-16 Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYT--RPSKAGD-EQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIKA 431 +TP VIEP+ G+GR + ++ P+ G E+ V R P ++P+K V PL +N + AK ++T L+ + + D G +IG+RY R DE+G PF +TVD ++VT+RERDS Q RVS+D+ + A Sbjct: 315 WTPYVIEPAAGVGRAMLAFLLDAYVEDEAPNAKGKMEKRTVLRLDPRLSPVKVAVLPLSRNPELSPKAKGLATALRQHW-NIEFDDAG-AIGRRYRRQDEIGTPFCVTVDFDTLDDNAVTVRERDSMKQERVSLDQIEGYLAA 455
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_PYRKO (Glycyl-tRNA synthetase OS=Pyrococcus kodakaraensis GN=glyS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.876e-16 Identity = 50/131 (38.17%), Postives = 73/131 (55.73%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 P V+EPSFGI R Y L E+S +E R +API+ V PLV + + +A I L+ G D T +G+RY R DE+G P+ +TVD+ + +VTIR+RD+++QIRV ++E Sbjct: 435 PHVLEPSFGIDRPFYLLLENSLVI------EEDRTYLRIKKDMAPIEVAVLPLVAKEPLKSIAYDIFRTLQKEGFIAVYDEKDT-VGRRYMRYDEIGTPYCVTVDNQTPEDGTVTIRDRDTREQIRVKIEE 558
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_CLOTH (Glycyl-tRNA synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=glyQS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.876e-16 Identity = 53/145 (36.55%), Postives = 76/145 (52.41%), Query Frame = 3 Query: 18 RVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVTD 440 R + P IEPS G R+ ++ + GD ++ V RF P +AP+K V PL + +E K+ L+K + D TG SIGKRY R DE+G P+ +T D S VT+R+RDS Q+R+ +DE S + D Sbjct: 322 RKYIPYCIEPSLGADRVALVFLCDAYDEEEVEEGDIRV-VLRFHPAIAPVKIAVLPL-SKKLGDEAYKIYEMLIKKYNCEY--DETG-SIGKRYRRQDEIGTPYCVTFDFDSLNDRCVTVRDRDSMQQVRIKIDELLSYFEGKFD 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_PYRHO (Glycyl-tRNA synthetase OS=Pyrococcus horikoshii GN=glyS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.290e-15 Identity = 54/143 (37.76%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVF-RFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVTDG 443 P V+EPSFGI R Y L E+S DE ++ + +API+ V PLV + +A I L+ G D SIGKRY R DE+G P+ +TVD+ + +VTIR+RD+++QIRV ++E +K + G Sbjct: 435 PHVLEPSFGIDRPFYLLLENSLTV------DEDGRIYLKIKKDMAPIEVAVLPLVAKEPLTTIAYEIYRTLQKEGFIVVYD-EKDSIGKRYMRYDEIGTPYCVTVDNQTPEDGTVTIRDRDTREQIRVKIEELPRKLKELIFG 570
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_PYRFU (Glycyl-tRNA synthetase OS=Pyrococcus furiosus GN=glyS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.290e-15 Identity = 55/143 (38.46%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVF-RFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVTDG 443 P V+EPSFGI R Y L E+S DE V+ + +API+ V PLV + +A I L+ G D SIGKRY R DE+G P+ +TVD+ + +VTIR+RD+++QIRV ++E +K + G Sbjct: 433 PHVLEPSFGIDRPFYLLLENSLTV------DEDGRVYLKIKKDMAPIEVAVLPLVAKEPLTTIAYEIYRNLQKEGFIVVYD-EKDSIGKRYMRYDEIGTPYCVTVDNQTPEDGTVTIRDRDTREQIRVKIEEVPRKLKELIFG 568
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_DEIGD (Glycyl-tRNA synthetase OS=Deinococcus geothermalis (strain DSM 11300) GN=glyQS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.290e-15 Identity = 51/153 (33.33%), Postives = 80/153 (52.29%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQN-QQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD-----------STSSVTIRERDSKDQIRVSVDEAASVIKA 431 E + P VIEPS G+ R + + ++ + G E++ V + P +APIK V PL +N ++ VAK I L+ G+ + +IGK Y R DE+G P+ +TVD T +VT+R+RD+ Q RV + E A+ ++A Sbjct: 350 ETNKPVVPFVIEPSAGVDRAMLAVLAEAYTKETLENGSERI-VLKLKPHLAPIKVAVIPLARNREEITSVAKAIKAKLQSLGLGRVLYEDSGNIGKAYRRHDEVGTPYCVTVDFETVGKGEDPALTDTVTVRDRDTLGQERVRISELANWLQA 501
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_DEIRA (Glycyl-tRNA synthetase OS=Deinococcus radiodurans GN=glyQS PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.685e-15 Identity = 52/155 (33.55%), Postives = 81/155 (52.26%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQN-QQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS-------------SVTIRERDSKDQIRVSVDEAASVIKA 431 E + P VIEPS G+ R + + +F + G+E++ V + P +APIK V PL +N ++ +VAK I L+ G+ + +IGK Y R DE+G P+ +TVD + +VT+R+RD+ Q RV + E A I+A Sbjct: 350 ETNKPVVPFVIEPSAGVDRAMLAVLSEAFTKETLENGNERI-VLKLKPHLAPIKVAVIPLARNREEITDVAKAIKAELQGLGLGRVLYEDSGNIGKAYRRHDEVGTPYCVTVDFDTVGLGENTDESLKDTVTVRDRDTLAQERVKISELAGWIQA 503 The following BLAST results are available for this feature:
BLAST of CX288780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288780 ID=CX288780; Name=CX288780; organism=Citrus clementina; type=EST; length=510bpback to top |