CX288780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STRCO (Glycyl-tRNA synthetase OS=Streptomyces coelicolor GN=glyQS PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.200e-15 Identity = 52/142 (36.62%), Postives = 81/142 (57.04%), Query Frame = 3 Query: 6 KEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYT--RPSKAGD-EQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDE 410 +E Q +TP VIEP+ G+GR + ++ P+ G E+ V R P ++P+K V PL +N + AK ++ L+ + + D G +IG+RY R DE+G PF +TVD ++VT+RERD+ Q RVS+D+ Sbjct: 309 QEAQERWTPYVIEPAAGVGRAMLAFLLDAYIEDEAPNAKGKLEKRTVLRLDPRLSPVKVAVLPLSRNPELSPKAKGLAQALR-QNWNIEFDDAG-AIGRRYRRQDEIGTPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQ 448
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_RHOBA (Glycyl-tRNA synthetase OS=Rhodopirellula baltica GN=glyQS PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 2.874e-15 Identity = 56/143 (39.16%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGR--IIYCLYEHSFYTRPSKAGDEQLN-VFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKA 431 F P VIEPS G R + + ++ P + G Q V + P +APIK VFPLV+ EVA+ I LK + D G ++G+RY R DE G P+ ITVD S +VTIR+RD+ +Q RV +D+ S I++ Sbjct: 390 FVPHVIEPSAGADRAALAFLCEAYTEDEAPDENGKMQTRTVMKLDPRLAPIKAAVFPLVKKDGMPEVAQEIYGALK-EHYNVFYDAKG-AVGRRYRRQDEAGTPYCITVDGDSLTDKTVTIRDRDTLEQTRVKIDDVVSEIQS 530
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_BIFLO (Glycyl-tRNA synthetase OS=Bifidobacterium longum GN=glyQS PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.402e-15 Identity = 50/143 (34.97%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPS---KAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIKA 431 + P VIEP+ G+ R + C ++ + K G ++ V R P +AP+K V PL + + + VA+ ++ L+ D +G +IG+RY R DE+G P ITVD +VTIRERD+ Q RV++D+ A + A Sbjct: 316 YVPYVIEPAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPLSKKPELQTVAQNLADDLRFNEWMIDYDESG-AIGRRYRRQDEIGTPLCITVDFDTLEDHAVTIRERDTMAQERVALDKVADYVAA 457
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_PYRAB (Glycyl-tRNA synthetase OS=Pyrococcus abyssi GN=glyS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.092e-14 Identity = 51/143 (35.66%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVF-RFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVTDG 443 P V+EPSFGI R Y L E+S DE ++ + +API+ V PLV + ++A + L+ G D SIGKRY R DE+G P+ +T+D+ + +VTIR+RD+++QIRV +++ +K + G Sbjct: 435 PHVLEPSFGIDRPFYLLLENSLTI------DEDGRIYLKIKKDMAPIEVAVLPLVAKEPLTKIAYDLFRKLQKEGFIVVYD-EKDSIGKRYMRYDEIGTPYCVTIDNQTPIDGTVTIRDRDTREQIRVKLEDVPRKLKELIFG 570
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_MYCGA (Glycyl-tRNA synthetase OS=Mycoplasma gallisepticum GN=glyQS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.863e-14 Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDI-TGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIK 428 P VIEPS GI RI+Y ++ + Y A ++ V R P ++P + + PLV N+ ++ ++ LLK++ + + D + SIGKRY R D +G + +T D S VTIRERDS +QI++ + E I+ Sbjct: 324 PDVIEPSLGIERILYAIF-CAHYHVEQLADNDSREVLRLPVSLSPYQLAILPLV-NKLKDQAYQLYLDLLKISDANLRFDFDSAGSIGKRYRRYDAIGAKYCLTYDFDSLEKGIVTIRERDSMEQIKIPISELRQWIR 459
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_CLOCE (Glycyl-tRNA synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=glyQS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.433e-14 Identity = 52/136 (38.24%), Postives = 72/136 (52.94%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAAS 419 + P IEPS G R+ ++ GD + V RF P +AP+K V PL + E+ KV L K + D TG SIGKRY R DE+G P+ IT D S SVTIR+RD+ Q+R+ +++ A+ Sbjct: 324 YVPYCIEPSLGADRVTLAFLCEAYDEEEVAEGDVR-TVLRFHPALAPVKIAVLPL-SKKLGEDADKVYQMLAKSYYCEY--DETG-SIGKRYRRQDEIGTPYCITFDFDSLEDKSVTIRDRDTMQQVRIKIEDLAA 454
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_EUBR3 (Glycyl-tRNA synthetase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=glyQS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.177e-14 Identity = 52/137 (37.96%), Postives = 71/137 (51.82%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCL----YEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTSS----VTIRERDSKDQIRVSVDE 410 + P VIEPS G R++ Y+ P K + VF F P +AP+K V PL + E KV + L K + D GT IGKRY R DE+G PF +T D S VT+R+RD+ +Q R+++DE Sbjct: 324 YLPYVIEPSLGADRVVLAFLCAAYDEEDIGTPEKP--DVRTVFHFHPALAPVKIGVLPLSKKLN-ESAEKVFAQLSKTYNCEY--DDRGT-IGKRYRRQDEIGTPFCVTYDFDSEEDHCVTVRDRDTMEQERIAIDE 454
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_THEFY (Glycyl-tRNA synthetase OS=Thermobifida fusca (strain YX) GN=glyQS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.149e-14 Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGR--IIYCLYEHSFYTRPSKAGD-EQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDE 410 F P VIEPS G+ R + + L ++ P+ G E+ V R P +AP+K V PL +N A+ ++ L+ + + D G +IG+RY R DE+G PF +T+D ++VT+RERDS Q R+S+D+ Sbjct: 317 FIPYVIEPSAGVDRTMLTFLLDAYTEDEAPNAKGKMEKRVVMRLDPRLAPVKAAVLPLSRNADLSPKARDLAAKLRKRW-NVEFDDAG-AIGRRYRRQDEIGTPFCVTIDFDTLEDNAVTVRERDSMAQERISIDQ 450
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_CLOK5 (Glycyl-tRNA synthetase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=glyQS PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.419e-14 Identity = 50/139 (35.97%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIK 428 + P IEPS G R + ++ + GD + V F P +AP K + PL + E+ V + L K + + D G SIGKRY R DE+G P+ IT+D +VTIR+RD+ Q RV +DE IK Sbjct: 325 YIPYCIEPSVGADRAVLAFLVDAYDEEELEGGDVR-TVMHFHPAIAPFKVAILPLSKKLS-EKALDVYNMLRKDFNVDY--DDAG-SIGKRYRREDEIGTPYCITIDFDTMDNDTVTIRDRDTMKQFRVKIDELKDFIK 458
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_CLOK1 (Glycyl-tRNA synthetase OS=Clostridium kluyveri (strain NBRC 12016) GN=glyQS PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.419e-14 Identity = 50/139 (35.97%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIK 428 + P IEPS G R + ++ + GD + V F P +AP K + PL + E+ V + L K + + D G SIGKRY R DE+G P+ IT+D +VTIR+RD+ Q RV +DE IK Sbjct: 325 YIPYCIEPSVGADRAVLAFLVDAYDEEELEGGDVR-TVMHFHPAIAPFKVAILPLSKKLS-EKALDVYNMLRKDFNVDY--DDAG-SIGKRYRREDEIGTPYCITIDFDTMDNDTVTIRDRDTMKQFRVKIDELKDFIK 458 The following BLAST results are available for this feature:
BLAST of CX288780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288780 ID=CX288780; Name=CX288780; organism=Citrus clementina; type=EST; length=510bpback to top |