CX288780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_BORGA (Glycyl-tRNA synthetase OS=Borrelia garinii GN=glyQS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 9.244e-14 Identity = 46/139 (33.09%), Postives = 78/139 (56.12%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIK 428 + P VIE S G+ R + +++ GD+++ V R P +AP K +FPLV+ + E+A+ I +++ H +IGKRY R DE+G P+ +TVD ++ +VT+RER++ Q R+ +++ S IK Sbjct: 298 YVPHVIETSAGLTRSVLMTLCNAYSEEELSDGDKRI-VLRLHPKLAPYKIAIFPLVKKVELVEIARRI--YIELCDDFHIFYDDSGTIGKRYRRQDEIGTPYCVTVDYSTIEDETVTVRERNNMTQKRIFINDLYSYIK 433
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_THERP (Glycyl-tRNA synthetase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=glyQS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.207e-13 Identity = 49/150 (32.67%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 6 KEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPS---KAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGT-SIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIKA 431 +E + P VIEP+ G+ R+ L ++ P+ V RF P VAP K V PL++ + VA+ ++ L+ +I+ T SIG+RY R DE+G P+ +T+D +VTIR+RD+ Q+RV + I+A Sbjct: 317 QERNERYIPHVIEPTMGVERLFLALLCDAYDEEPAVDVNGNPYTRVVLRFHPRVAPYKVAVLPLLRKPELVTVAREVAQELRQY---FRIEYDETQSIGRRYRRQDEIGTPYCVTIDYQTLEDRTVTIRDRDTMQQVRVPISGLVEEIEA 463
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_BORBU (Glycyl-tRNA synthetase OS=Borrelia burgdorferi GN=glyQS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.207e-13 Identity = 46/139 (33.09%), Postives = 75/139 (53.96%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDEAASVIK 428 + P VIE S G+ R + ++ GD+++ V R P +AP K +FPLV+ + E+A+ I +++ H +IGKRY R DE+G P+ +T+D +VT+RER+S Q R+ +++ S IK Sbjct: 298 YVPYVIETSAGLTRSVLMTLCDAYSEEELSDGDKRI-VLRLHPKLAPYKIAIFPLVKKVELTEIARRI--YMELCDDFHIFYDDSGTIGKRYRRQDEIGTPYCVTIDYNTIEDETVTVRERNSMTQKRIFINDLYSYIK 433
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_CORGL (Glycyl-tRNA synthetase OS=Corynebacterium glutamicum GN=glyQS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.577e-13 Identity = 48/143 (33.57%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 6 KEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRP---SKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVA-KVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 +E + P VIEP+ G+GR + +++ SK G ++ V + +AP+K V PL + +A K+ + L + + + T +IG+RY R DE+G PF +TVD S +VT+RERD+ +Q+RV +DE Sbjct: 310 QETNERWIPFVIEPAAGLGRAMMMFLMDAYHEDEAPNSKGGVDKRVVLKLDRRLAPVKVAVLPLSKKDTLTPLAEKLAAELREFWNVDYD---TSGAIGRRYRRQDEIGTPFCVTVDFDSLEDNAVTVRERDTMEQVRVPLDE 449
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_THETN (Glycyl-tRNA synthetase OS=Thermoanaerobacter tengcongensis GN=glyQS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.690e-13 Identity = 50/133 (37.59%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 + P IEPS G+ R++ + Y G+ ++ V R P +AP+K VFPL +++ E A I LK + D +G SIG+RY R DE+G PF +T D S VTIR+RD+ +QIR+ +D+ Sbjct: 324 YIPYCIEPSVGVDRLMLAFLVDA-YDEEEVEGETRV-VLRLHPAIAPVKVAVFPL--SKKLNEAAYKIYLDLKKK-FPAEYDESG-SIGRRYRRQDEIGTPFCVTYDFDSENDHKVTIRDRDTMEQIRIDIDQ 450
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_PROAC (Glycyl-tRNA synthetase OS=Propionibacterium acnes GN=glyQS PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 2.690e-13 Identity = 50/138 (36.23%), Postives = 74/138 (53.62%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRP----SKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGT-SIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 + P VIEP+ G+ R + + YT +K G ++ V + P ++P+K V PL +N A+ ++ L+ +D +IGKRY R DE+G PF ITVD S +VTIRERD+ Q RVS+D+ Sbjct: 327 YLPYVIEPAAGLTRSLMAFMVDA-YTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSRNSDLSPKARDLAARLRE---HWNVDFDDAQAIGKRYRRQDEIGTPFCITVDFDSLEDDAVTIRERDTMAQQRVSIDK 460
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_MYCPE (Glycyl-tRNA synthetase OS=Mycoplasma penetrans GN=glyQS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.690e-13 Identity = 51/141 (36.17%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 6 KEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLN--VFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDE 410 +E + F PSVIEPS G+ R++Y + ++ + DE+ N V + P +AP K V PL N+ ++ ++ + L+ ++ D +G SIGKRY R D +G P+ ITVD VTIR+RDS QIR+ + + Sbjct: 315 EETKEKFVPSVIEPSVGVERLLYAILIDAY---DEEKIDEENNRVVLKLIPELAPYKFAVLPL-SNKLNDKAEEIFNNLILSNICTY--DSSG-SIGKRYRRQDAIGTPYCITVDFDTLEDECVTIRDRDSMKQIRIKIKD 448
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_LYSSC (Glycyl-tRNA synthetase OS=Lysinibacillus sphaericus (strain C3-41) GN=glyQS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.690e-13 Identity = 50/139 (35.97%), Postives = 66/139 (47.48%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIK 428 + P IEPS G R+ + Y GD++ V RF P +AP K V PL + +E V + L K + SIGKRY R DE+G PF IT D S VT+R RDS Q R+ + E + I+ Sbjct: 323 YIPYCIEPSLGADRVTLAFLCDA-YDEEELEGDDKRTVLRFHPAIAPFKAAVLPLSKKLS-DEATDVWAELRKAFPVDFD---ESQSIGKRYRRQDEIGTPFCITYDFDSKEDGQVTVRHRDSMTQERMPISEVKAYIE 456
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_LEIXX (Glycyl-tRNA synthetase OS=Leifsonia xyli subsp. xyli GN=glyQS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.690e-13 Identity = 46/135 (34.07%), Postives = 75/135 (55.56%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPS---KAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVD 407 + P VIEPSFG+ R + ++ + K G ++ V P +AP+K V PL +N+ +A+ ++ L+ + D +G +IG+RY R DE+G P A+TVD S +VT+R+RDS Q R+ ++ Sbjct: 318 YVPFVIEPSFGLTRALMAFLVDAYDEEQAPNAKGGTDKRTVLHLDPRLAPVKVAVLPLSRNEALSPLARGLADRLRQRR-AVDFDDSG-AIGRRYRREDEIGTPLAVTVDFDSLEDDAVTVRDRDSMRQERIPLE 450
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_COREF (Glycyl-tRNA synthetase OS=Corynebacterium efficiens GN=glyQS PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 2.690e-13 Identity = 47/134 (35.07%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 30 PSVIEPSFGIGRIIYCLYEHSFYTRP---SKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDE 410 P VIEP+ G+GR + +++ SK G ++ V + +AP+K V PL + + A+ ++ L+ + + D +G +IG+RY R DE+G PF +TVD ++VT+RERD+ +QIRV +DE Sbjct: 318 PYVIEPAAGLGRAMMVFLMDAYHEDEAPNSKGGVDKRVVLKLDRRLAPVKVAVLPLSKKPELSGPAEKLAAELRQFW-NVEYDTSG-AIGRRYRRQDEIGTPFCVTVDFDTLEDNAVTVRERDTMEQIRVPLDE 449 The following BLAST results are available for this feature:
BLAST of CX288780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288780 ID=CX288780; Name=CX288780; organism=Citrus clementina; type=EST; length=510bpback to top |