CX288780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_MYCTU (Glycyl-tRNA synthetase OS=Mycobacterium tuberculosis GN=glyQS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12 Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRP----SKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGT-SIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVI 425 +TP VIEP+ G+ R + + YT +K G ++ V R P +AP+K V PL ++ A+ + L+ ID +IG+RY R DE+G PF +TVD S +VT+RERD+ Q RV++ A + Sbjct: 318 YTPYVIEPAAGLTRS-FMAFLIDAYTEDEAPNTKGGMDKRTVLRLDPRLAPVKAAVLPLSRHADLSPKARDLGAELRKCW---NIDFDDAGAIGRRYRRQDEVGTPFCVTVDFDSLQDNAVTVRERDAMTQDRVAMSSVADYL 456
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_MYCBO (Glycyl-tRNA synthetase OS=Mycobacterium bovis GN=glyQS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12 Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRP----SKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGT-SIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVI 425 +TP VIEP+ G+ R + + YT +K G ++ V R P +AP+K V PL ++ A+ + L+ ID +IG+RY R DE+G PF +TVD S +VT+RERD+ Q RV++ A + Sbjct: 318 YTPYVIEPAAGLTRS-FMAFLIDAYTEDEAPNTKGGMDKRTVLRLDPRLAPVKAAVLPLSRHADLSPKARDLGAELRKCW---NIDFDDAGAIGRRYRRQDEVGTPFCVTVDFDSLQDNAVTVRERDAMTQDRVAMSSVADYL 456
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_BACHK (Glycyl-tRNA synthetase OS=Bacillus thuringiensis subsp. konkukian GN=glyQS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12 Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 + P IEPS G R+ ++ + ++ V RF P +AP K + PL + E +V + L K + D TG SIGKRY R DE+G PF IT D S +VT+R+RD+ +Q+R+ + E Sbjct: 321 YVPYCIEPSLGADRVTLAFLCDAY--EEEQLENDSRTVLRFHPALAPYKAAILPLSKKLS-EGATEVFAELAKDFMVD--FDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISE 447
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_BACCZ (Glycyl-tRNA synthetase OS=Bacillus cereus (strain ZK / E33L) GN=glyQS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12 Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 + P IEPS G R+ ++ + ++ V RF P +AP K + PL + E +V + L K + D TG SIGKRY R DE+G PF IT D S +VT+R+RD+ +Q+R+ + E Sbjct: 321 YVPYCIEPSLGADRVTLAFLCDAY--EEEQLENDSRTVLRFHPALAPYKAAILPLSKKLS-EGATEVFAELAKDFMVD--FDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISE 447
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_BACC1 (Glycyl-tRNA synthetase OS=Bacillus cereus (strain ATCC 10987) GN=glyQS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12 Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 + P IEPS G R+ ++ + ++ V RF P +AP K + PL + E +V + L K + D TG SIGKRY R DE+G PF IT D S +VT+R+RD+ +Q+R+ + E Sbjct: 321 YVPYCIEPSLGADRVTLAFLCDAY--EEEQLENDSRTVLRFHPALAPYKAAILPLSKKLS-EGATEVFAELAKDFMVD--FDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISE 447
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_BACAN (Glycyl-tRNA synthetase OS=Bacillus anthracis GN=glyQS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12 Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 + P IEPS G R+ ++ + ++ V RF P +AP K + PL + E +V + L K + D TG SIGKRY R DE+G PF IT D S +VT+R+RD+ +Q+R+ + E Sbjct: 321 YVPYCIEPSLGADRVTLAFLCDAY--EEEQLENDSRTVLRFHPALAPYKAAILPLSKKLS-EGATEVFAELAKDFMVD--FDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISE 447
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_TREDE (Glycyl-tRNA synthetase OS=Treponema denticola GN=glyQS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.974e-12 Identity = 53/143 (37.06%), Postives = 74/143 (51.75%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAG----DEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIK 428 + P +IE S G+ R + ++ Y A D+ V RF P +API V PL++ E+A+ I LK D +G +IGKRY R DE+G PF +TVD S +VT+R RDS +Q+R+ E S IK Sbjct: 302 YIPYIIETSAGLTRNVL-MFICDAYDEEKVADKGNDDDWRTVLRFHPNIAPITVAVLPLMKKDGLAELAEEIRNELKEE-FKTDYDQSG-AIGKRYRRQDEVGTPFCVTVDYDSKEDNTVTLRFRDSMEQVRIPRTELISRIK 441
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAES (Glycyl-tRNA synthetase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=glyQS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.974e-12 Identity = 47/139 (33.81%), Postives = 66/139 (47.48%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGT-SIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 E + P IEPS G R+ ++ + + V F P +AP K V PL + E + K+ L S ID + SIGKRY R DE+G P+ IT D S VT+R+RDS +Q+R+ + E Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYAEEGVEGSKDARTVMHFHPALAPYKAAVLPLSKKLSSEAI-KIFEQLSS----SFAIDFDESQSIGKRYRRQDEIGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISE 452
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAEQ (Glycyl-tRNA synthetase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=glyQS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.974e-12 Identity = 47/139 (33.81%), Postives = 66/139 (47.48%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGT-SIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 E + P IEPS G R+ ++ + + V F P +AP K V PL + E + K+ L S ID + SIGKRY R DE+G P+ IT D S VT+R+RDS +Q+R+ + E Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYAEEGVEGSKDARTVMHFHPALAPYKAAVLPLSKKLSSEAI-KIFEQLSS----SFAIDFDESQSIGKRYRRQDEIGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISE 452
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_CLOPH (Glycyl-tRNA synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glyQS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.884e-12 Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 + P VIEPS G R+ ++ GD + V F P +AP+K V PL + E K+ + L K + D G +IGKRY R DE+G PF IT D S +VT+R+RD+ +Q R+ +++ Sbjct: 324 YIPYVIEPSLGADRVTLAFLCAAYDEEEIAEGDVR-TVLHFHPAIAPVKIGVLPLSKKLS-ENAEKIYTDLSKYYNC--EFDDRG-NIGKRYRRQDEIGTPFCITYDFDSETDGAVTVRDRDTMEQERIKIED 451 The following BLAST results are available for this feature:
BLAST of CX288780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288780 ID=CX288780; Name=CX288780; organism=Citrus clementina; type=EST; length=510bpback to top |