CX288780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_EUBE2 (Glycyl-tRNA synthetase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glyQS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.072e-12 Identity = 49/136 (36.03%), Postives = 68/136 (50.00%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSV 404 E + + P VIEPS G R+ + S Y G + V F P +AP+K + PL + E KV + L K + D G +IGKRY R DE+G PF IT D S +VT+R+RD+ Q R+ + Sbjct: 319 EAKEKYIPYVIEPSLGADRVTLA-FLCSAYDEEELEGGDVRTVLHFHPAIAPVKIGILPLSKKLN-EGAEKVYAELSKYYNC--EFDDRG-NIGKRYRRQDEIGTPFCITYDFDSEEDGAVTVRDRDTMQQERIKI 449
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_NOCFA (Glycyl-tRNA synthetase OS=Nocardia farcinica GN=glyQS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.625e-12 Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPS---KAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVD----STSSVTIRERDSKDQIRVSVDE 410 + P VIEP+ G+ R + ++ + K G + V R +AP+K V PL +N AK ++ L+ + + D G +IG+RY R DE+G PF ITVD +VTIRERDS Q R+++D+ Sbjct: 321 YIPYVIEPAAGLTRSLMAFLVDAYAEDEAPNAKGGVDVRTVLRLDRRLAPVKAAVLPLSRNADLTPKAKDLAAQLRKHW-NVEFDDAG-AIGRRYRRQDEIGTPFCITVDFDTLEDQAVTIRERDSMAQERIALDK 454
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAAW (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain MW2) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAAT (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAAS (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain MSSA476) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAAR (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain MRSA252) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAAN (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain N315) GN=glyQS PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAAM (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=glyQS PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAAE (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain Newman) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAAC (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain COL) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461 The following BLAST results are available for this feature:
BLAST of CX288780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288780 ID=CX288780; Name=CX288780; organism=Citrus clementina; type=EST; length=510bpback to top |