CX288780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAAB (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAA9 (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain JH9) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAA8 (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAA3 (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain USA300) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAA2 (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain JH1) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAA1 (Glycyl-tRNA synthetase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=glyQS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 9 EHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVT 437 E + P IEPS G R+ ++ + + V F P +AP K + PL + E + K+ L I SIGKRY R DE+G P+ +T D S VT+R+RDS +Q+R+ + E + + T Sbjct: 319 ETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAI-KIFEQLSSKFSIDFD---ESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKT 461
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_ALKOO (Glycyl-tRNA synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=glyQS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.927e-11 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVI 425 + P IEPS G+ R+ ++ D ++ V R P +AP K V PL + + ++ ++ TL + + + D G SIGKRY R DE+G PF IT D S VTIR RDS +Q R+ + E + + Sbjct: 324 YVPYCIEPSVGVDRVALAFLVDAYDEEVIDEKDTRV-VLRLHPALAPFKAAVLPLTKKLK-DQALELYETLSENYMVDY--DEAG-SIGKRYRRHDEIGTPFCITFDYDSLEDQCVTIRHRDSMEQERIQISELTTYL 456
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_STAS1 (Glycyl-tRNA synthetase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=glyQS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.517e-11 Identity = 44/138 (31.88%), Postives = 64/138 (46.38%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVI 425 + P IEPS G R+ ++ + + V F P +AP K V PL + + + KV L I SIGKRY R DE+G P+ IT D S VT+R+RD+ +Q+R+ + E S + Sbjct: 324 YIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDSRTVLHFHPALAPYKAAVLPLSKKLSGDAI-KVFEELSADFAIDFD---ESQSIGKRYRRQDEIGTPYCITFDFDSLEDEKVTVRDRDTMEQVRMPITELKSFL 457
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_MYCPA (Glycyl-tRNA synthetase OS=Mycobacterium paratuberculosis GN=glyQS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.517e-11 Identity = 48/147 (32.65%), Postives = 74/147 (50.34%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYT--RPSKAGD-EQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDEAASVIKAVTDG 443 + P VIEP+ G+ R ++ P+ G E+ V R P +AP+K V PL ++ A+ ++ L+ + + D G +IG+RY R DE+G PF +TVD S +VT+R RD Q R+ +D A + A G Sbjct: 318 YIPYVIEPAAGLTRSFMAFLIDAYVEDEAPNAKGKMEKRAVLRLDPRLAPVKAAVLPLSRHADLSPKARDLAAELRRFW-NIEFDDAG-AIGRRYRRQDEIGTPFCVTVDFDSLEDNAVTVRRRDDMSQERIGMDAVADYLSARLKG 462
BLAST of CX288780 vs. ExPASy Swiss-Prot
Match: SYG_MYCGE (Glycyl-tRNA synthetase OS=Mycoplasma genitalium GN=glyQS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.517e-11 Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 24 FTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKVISTLLKVAGISHKIDITGTSIGKRYARTDELGVPFAITVDSTS----SVTIRERDSKDQIRVSVDE 410 F P +IEP+ GI R+ Y L S+ R +E+ V P + P + V PLV N+ +E V TL K + TG SIGKRY + D +G+ +A+T D S +VTIR+RD+ Q R+++ E Sbjct: 309 FLPFIIEPAVGIERLFYALIVSSY--RREIINEEEREVLSLPFDLCPEQIIVLPLV-NKLKKEAFSVFETLAKTRW-RVCFETTG-SIGKRYRKADAIGIKYAVTFDFESLEDNAVTIRDRDTLVQQRIAIKE 436 The following BLAST results are available for this feature:
BLAST of CX288780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288780 ID=CX288780; Name=CX288780; organism=Citrus clementina; type=EST; length=510bpback to top |