CX288785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_ECO27 (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=arnA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.128e-13 Identity = 42/126 (33.33%), Postives = 66/126 (52.38%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHLLE-PESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L E +++ LD+ +D I L P G I H I++ +K D+ + L AI TP +Y PL +F + L +++YC + KR+I ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYH------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 437
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_ECO24 (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=arnA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.128e-13 Identity = 42/126 (33.33%), Postives = 66/126 (52.38%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHLLE-PESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L E +++ LD+ +D I L P G I H I++ +K D+ + L AI TP +Y PL +F + L +++YC + KR+I ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYH------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 437
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_PECCP (Bifunctional polymyxin resistance protein arnA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.779e-13 Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGAGRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L + ++I LD+ +D I L G R F +I H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ ST EVYG Sbjct: 324 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFL------GDPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPSTSEVYG 443
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP7 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=arnA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.779e-13 Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGAGRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGK 445 + ++G G IG+HL E++L + ++I LD+ +D I L+ R F +I H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I ST EVYG K Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPSTSEVYGMCTDK 442
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_ERWCT (Bifunctional polymyxin resistance protein arnA OS=Erwinia carotovora subsp. atroseptica GN=arnA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.779e-13 Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGAGRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L + ++I LD+ +D I L G R F +I H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ ST EVYG Sbjct: 325 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFL------GDPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPSTSEVYG 444
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_SERP5 (Bifunctional polymyxin resistance protein arnA OS=Serratia proteamaculans (strain 568) GN=arnA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.630e-13 Identity = 45/126 (35.71%), Postives = 66/126 (52.38%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGAGRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L + + I LD+ +D I L G R F +I H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLRDDRYDIYGLDIGSDAISRFL------GNPRFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPSTSEVYG 437
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_ECOL6 (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O6 GN=arnA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.630e-13 Identity = 41/126 (32.54%), Postives = 66/126 (52.38%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHLLE-PESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L E +++ LD+ +D I + P G I H I++ +K D+ + L AI TP +Y PL +F + L +++YC + KR+I ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIEYH------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 437
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_ECO81 (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O81 (strain ED1a) GN=arnA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.630e-13 Identity = 41/126 (32.54%), Postives = 66/126 (52.38%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHLLE-PESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L E +++ LD+ +D I + P G I H I++ +K D+ + L AI TP +Y PL +F + L +++YC + KR+I ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIEYH------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 437
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_SHESH (Bifunctional polymyxin resistance protein arnA OS=Shewanella sediminis (strain HAW-EB3) GN=arnA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.741e-13 Identity = 43/126 (34.13%), Postives = 71/126 (56.35%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIK-HLLEPESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++GA G IG+HL +++L + ++I A+D+ + +I+ HL P+ G I H I++ IK D+ + L AI TP +Y PL +F + L +V+ C + +KR+I ST EVYG Sbjct: 320 VLIMGANGFIGNHLTKRLLDDGKYEIYAMDMSSSQIEQHLSHPDFHFVEGDITIHNEWIEYH------IKKCDIVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRACVKYDKRIIFPSTSEVYG 439
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_PROMH (Bifunctional polymyxin resistance protein arnA OS=Proteus mirabilis (strain HI4320) GN=arnA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.191e-13 Identity = 42/126 (33.33%), Postives = 67/126 (53.17%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGAGRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L + + I +D+ + I+ + G R F ++ H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLKDGNYDIYGMDIGSSAIERFI------GNPRFHFIEGDVSIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPSTSEVYG 437 The following BLAST results are available for this feature:
BLAST of CX288785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288785 ID=CX288785; Name=CX288785; organism=Citrus clementina; type=EST; length=514bpback to top |