CX288785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_SALA4 (Bifunctional polymyxin resistance protein arnA OS=Salmonella agona (strain SL483) GN=arnA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.086e-13 Identity = 40/126 (31.75%), Postives = 68/126 (53.97%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L E +++ +D+ ++ I + LL P G I H I++ +K D+ + L AI TP +Y PL +F + L +++YC + KR++ ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHPRFHFVEGDISIHSEWIEYH------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYG 437
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_PSEAB (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=arnA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.086e-13 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 2 Query: 38 PIKPMTICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHL-LEPESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 P + + ++G G IG+HL E++L + +++ +D+ +D I+ L +P G I H LE +K D+ + L AI TP +Y PL +F + L +V+YC + KR++ ST EVYG Sbjct: 314 PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERLKADPHFHFVEGDIGIH------SEWLEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIVRYCVKYGKRVVFPSTSEVYG 439
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_YERE8 (Bifunctional polymyxin resistance protein arnA OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=arnA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.056e-12 Identity = 42/126 (33.33%), Postives = 67/126 (53.17%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHLLE-PESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L + +++ LD+ +D I L+ P G I H I++ IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLRDNRYEVYGLDIGSDAICRFLDNPNFHFVEGDISIHSEWIEYH------IKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPSTSEVYG 437
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_SALTI (Bifunctional polymyxin resistance protein arnA OS=Salmonella typhi GN=arnA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.056e-12 Identity = 40/126 (31.75%), Postives = 68/126 (53.97%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L E +++ +D+ ++ I + LL P G I H I++ +K D+ + L AI TP +Y PL +F + L +++YC + KR++ ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLDEENYEVYGMDIGSNAISRFLLHPRFHFVEGDISIHSEWIEYH------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYG 437
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_SALPK (Bifunctional polymyxin resistance protein arnA OS=Salmonella paratyphi A (strain AKU_12601) GN=arnA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.056e-12 Identity = 40/126 (31.75%), Postives = 68/126 (53.97%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L E +++ +D+ ++ I + LL P G I H I++ +K D+ + L AI TP +Y PL +F + L +++YC + KR++ ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLDEENYEVYGMDIGSNAISRFLLHPRFHFVEGDISIHSEWIEYH------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYG 437
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_SALPA (Bifunctional polymyxin resistance protein arnA OS=Salmonella paratyphi A GN=arnA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.056e-12 Identity = 40/126 (31.75%), Postives = 68/126 (53.97%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L E +++ +D+ ++ I + LL P G I H I++ +K D+ + L AI TP +Y PL +F + L +++YC + KR++ ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLDEENYEVYGMDIGSNAISRFLLHPRFHFVEGDISIHSEWIEYH------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYG 437
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_PSEAE (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa GN=arnA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.056e-12 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 2 Query: 38 PIKPMTICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHL-LEPESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 P + + ++G G IG+HL E++L + +++ +D+ +D I+ L +P G I H LE +K D+ + L AI TP +Y PL +F + L +V+YC + KR++ ST EVYG Sbjct: 314 PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERLKADPHFHFVEGDIGIH------SEWLEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLRIVRYCVKYGKRVVFPSTSEVYG 439
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_PSEA8 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain LESB58) GN=arnA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.056e-12 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 2 Query: 38 PIKPMTICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHL-LEPESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 P + + ++G G IG+HL E++L + +++ +D+ +D I+ L +P G I H LE +K D+ + L AI TP +Y PL +F + L +V+YC + KR++ ST EVYG Sbjct: 314 PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERLKADPHFHFVEGDIGIH------SEWLEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLRIVRYCVKYGKRVVFPSTSEVYG 439
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_PSEA7 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain PA7) GN=arnA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.056e-12 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 2 Query: 38 PIKPMTICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHL-LEPESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 P + + ++G G IG+HL E++L + +++ +D+ +D I+ L +P G I H LE +K D+ + L AI TP +Y PL +F + L +V+YC + KR++ ST EVYG Sbjct: 314 PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERLKADPHFHFVEGDIGIH------SEWLEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLRIVRYCVKYGKRVVFPSTSEVYG 439
BLAST of CX288785 vs. ExPASy Swiss-Prot
Match: ARNA_PHOLL (Bifunctional polymyxin resistance protein arnA OS=Photorhabdus luminescens subsp. laumondii GN=arnA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.056e-12 Identity = 42/126 (33.33%), Postives = 66/126 (52.38%), Query Frame = 2 Query: 56 ICMIGAGGLIGSHLCEKILLETPHKILALDVYNDKIKHLLE-PESQTGAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 430 + ++G G IG+HL E++L + + I +D+ + I+ + P G I H I++ IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLRDGNYDIYGMDIGSSAIERFISNPRFHFIEGDINIHTEWIEYH------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPSTSEVYG 437 The following BLAST results are available for this feature:
BLAST of CX288785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288785 ID=CX288785; Name=CX288785; organism=Citrus clementina; type=EST; length=514bpback to top |