CX288800
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 275.789 bits (704), Expect = 8.082e-74 Identity = 129/170 (75.88%), Postives = 145/170 (85.29%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RFDG+LNVD+ EFQTNLVPYPRIHF L +YAPVISA KA HE SV E+T S FEP++ M KCDPRHGKYMA CL+YRGDVVP D +AAVAT+KTKRTIQFVDWCPTGFK GI YQPP VP GDLAKV RAVCM+SN+T++AE +S + KFDLMY+KRAFVHWYVGEG Sbjct: 243 RFDGSLNVDLNEFQTNLVPYPRIHFPLVAYAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEG 412
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 274.633 bits (701), Expect = 1.800e-73 Identity = 124/170 (72.94%), Postives = 148/170 (87.06%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RFDGALNVD+ EFQTNLVPYPRIHF L++YAPVISA++A+HE LSV +IT+ FE ++ M KCDP GKYMA CL+YRGDVVPKDVNAA++++K KR I FVDWCPTGFK GINYQ P V GGDLAKV RAVCM+SN+T++AE ++R+DHKFDLMY+KRAFVHW+VGEG Sbjct: 246 RFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEG 415
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 274.248 bits (700), Expect = 2.351e-73 Identity = 117/170 (68.82%), Postives = 151/170 (88.82%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF+G LNVD+ EFQTNLVPYPRIHF ++++AP++SA+KAYHEQ SV++IT + FE S+ + KCDPR GKYMACCL+YRGDVVPK+VNAA+A K++ ++QFVDWCPTGFK GIN +PPTV+PGGDLAKV R++CM+SN+T++ E ++R+DHKFDLMYAKRAF+HWY+ EG Sbjct: 250 RFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREG 419
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 1.167e-72 Identity = 123/170 (72.35%), Postives = 147/170 (86.47%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RFDG+LNVD+ EFQTNLVP+PRIHF L++ AP++S +KA HE SVAE+T S FEP + M KCDPR GKYMAC L+YRGDVVPKD NAAVA IKTKRTIQFVDWCPTGFK GI +PP VPGGDLAKV+R++CM+SN+T+++ +SR+DHKFDL+Y+KRAFVHWYVGEG Sbjct: 242 RFDGSLNVDLNEFQTNLVPFPRIHFPLATLAPIVSVDKAGHESNSVAEMTYSCFEPGNQMVKCDPRDGKYMACALLYRGDVVPKDTNAAVALIKTKRTIQFVDWCPTGFKLGICNEPPAHVPGGDLAKVKRSMCMLSNTTAISSAWSRLDHKFDLLYSKRAFVHWYVGEG 411
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.524e-72 Identity = 127/170 (74.71%), Postives = 144/170 (84.71%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RFDG+LNVD+ EFQTNLVPYPRIHF L +YAPVISA KA HE SV E+T S FEP++ M KCDPRHGKYMA CL+Y GDVVP D +AAVA++KTKRTIQFVDWCPTGFK GI YQPP VP GDLAKV RAVCM+SN+T++AE +S + KFDLMY+KRAFVHWYVGEG Sbjct: 243 RFDGSLNVDLNEFQTNLVPYPRIHFPLVAYAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYGGDVVPNDAHAAVASLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEG 412
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBA1_SCHPO (Tubulin alpha-1 chain OS=Schizosaccharomyces pombe GN=nda2 PE=2 SV=2) HSP 1 Score: 270.781 bits (691), Expect = 2.600e-72 Identity = 122/170 (71.76%), Postives = 145/170 (85.29%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G+LNVD+ EFQTNLVPYPRIHF L +Y+P++SA KA+HE SV EITN FEP + M KCDPR G+YMA CL+YRGDV+P+DV AAV +IK++RTIQFVDWCPTGFK GI Y+PP VPG +AKV RAVCM+SN+TS+AE +SR+DHKFDLMY+KRAFVHWYVGEG Sbjct: 247 RFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEG 416
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2) HSP 1 Score: 269.24 bits (687), Expect = 7.564e-72 Identity = 122/170 (71.76%), Postives = 144/170 (84.71%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF+G+LNVD+ EFQTNLVPYPRIHF L +YAP++SA KA+HE SV EITN FEP + M KCDPR G+YMA CL+YRGDV+P+DV AAV TIK KRTIQFVDWCPTGFK GI +PP + G ++AKV RAVCM+SN+TS+AE +SR+DHKFDLMY+KRAFVHWYVGEG Sbjct: 243 RFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEG 412
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2) HSP 1 Score: 268.855 bits (686), Expect = 9.879e-72 Identity = 126/170 (74.12%), Postives = 144/170 (84.71%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RFDG+LNVD+ EFQTNLVPYPRIHF L +Y+PVISA KA HE SV E+T S FEP++ M KCDPRHGKYMA CL+YRGDVVP D +AAVAT+KTKRTIQFVDWCPTGFK GI YQ P VP GDLAKV RAVCM+SN+T++AE +S + KFDLM++KRAFVHWYVGEG Sbjct: 243 RFDGSLNVDLNEFQTNLVPYPRIHFPLVAYSPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQAPENVPNGDLAKVSRAVCMLSNTTAIAEAWSSLSLKFDLMHSKRAFVHWYVGEG 412
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBA1_YEAST (Tubulin alpha-1 chain OS=Saccharomyces cerevisiae GN=TUB1 PE=1 SV=2) HSP 1 Score: 263.462 bits (672), Expect = 4.151e-70 Identity = 120/170 (70.59%), Postives = 138/170 (81.18%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RFDG+LNVD+ EFQTNLVPYPRIHF L SY+PV+S KA+HE SV+EITN+ FEP + M KCDPR GKYMA CL+YRGDVV +DV AV +K K+T+Q VDWCPTGFK GI Y+PPT P LA V RAVCM+SN+TS+AE + RID KFDLMYAKRAFVHWYVGEG Sbjct: 244 RFDGSLNVDLNEFQTNLVPYPRIHFPLVSYSPVLSKSKAFHESNSVSEITNACFEPGNQMVKCDPRDGKYMATCLLYRGDVVTRDVQRAVEQVKNKKTVQLVDWCPTGFKIGICYEPPTATPNSQLATVDRAVCMLSNTTSIAEAWKRIDRKFDLMYAKRAFVHWYVGEG 413
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 1.208e-69 Identity = 118/170 (69.41%), Postives = 138/170 (81.18%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RFDG+LNVD+ EFQTNLVPYPRIHF L SYAP++S KA+HE SV EITN+ FEP + M KCDPR GKYMA CL+YRGDVV +DV AVA +K K+T+Q VDWCPTGFK GI Y+PPT P L+ V RAVCM+SN+T++A+ + RID KFDLMYAKRAFVHWYVGEG Sbjct: 245 RFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPILSKSKAHHESNSVGEITNACFEPGNQMVKCDPRVGKYMATCLLYRGDVVTRDVQTAVAQVKNKKTVQLVDWCPTGFKIGICYEPPTATPNSQLSSVSRAVCMLSNTTAIADAWKRIDRKFDLMYAKRAFVHWYVGEG 414 The following BLAST results are available for this feature:
BLAST of CX288800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 403
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288800 ID=CX288800; Name=CX288800; organism=Citrus clementina; type=EST; length=511bpback to top |