CX288800
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB2_PHYPO (Tubulin beta-2 chain OS=Physarum polycephalum GN=BETC PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.484e-30 Identity = 61/170 (35.88%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + NL+P+PR+HF L YAP+ + L+V E+T F+ +MMA DPRHG+Y+ +RG + K+V+ + ++TK + FV+W P K + PP ++ + I N+T + E+F RI +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFLIGYAPLTARSAMGFRALTVPELTQQIFDSRNMMAASDPRHGRYLTASATFRGKMSTKEVDEQMHAVQTKNSSFFVEWIPNNIKSSVCDIPP--------KGMKMSATFIGNNTCIQELFKRIGLQFSAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_TRYCR (Tubulin beta chain OS=Trypanosoma cruzi PE=3 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 7.162e-30 Identity = 58/170 (34.12%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + NLVP+PR+HF + +AP+ S + LSV ++T F+ +MM DP HG+Y+ ++RG + K+V+ + ++ K + F++W P K I PP ++ AV + N+T + E+F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNLVPFPRLHFFMMGFAPLSSRGSQQYRGLSVPDVTQQMFDAKNMMQAADPAHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFIEWIPNNIKSSICDIPP--------KGLKMAVTFVGNNTCIQEMFRRVGEQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_METAN (Tubulin beta chain OS=Metarhizium anisopliae PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.162e-30 Identity = 60/170 (35.29%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPP--------RGLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_EPITY (Tubulin beta chain OS=Epichloe typhina GN=TUBB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.162e-30 Identity = 60/170 (35.29%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPP--------RGLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_DICDI (Tubulin beta chain OS=Dictyostelium discoideum GN=tubB PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 7.162e-30 Identity = 61/170 (35.88%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + NL+P+PR+HF L +AP+ + + + +++V E+T F+ +MMA DP +GKY+ ++RG + K+V+ + I+TK + FV+W P K I PP P AV I N+T++ ++F RI F M+ ++AF+HWY EG Sbjct: 246 RFPGQLNSDLRKLAVNLIPFPRLHFFLVGFAPLTAKGASSYNRITVPELTQQMFDAKNMMAASDPHNGKYLTASALFRGKIFTKEVDEQMHNIQTKNSSYFVEWIPHNIKSSICDIPPKGTP--------MAVTFIGNNTAIQDLFKRISIHFQAMFRRKAFLHWYTLEG 407
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_CEPAC (Tubulin beta chain OS=Cephalosporium acremonium GN=TUB2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.162e-30 Identity = 60/170 (35.29%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + +++K + FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQSKNSSYFVEWIPNNIQTALCAIPP--------RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB8_ORYSJ (Tubulin beta-8 chain OS=Oryza sativa subsp. japonica GN=TUBB8 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.162e-30 Identity = 58/170 (34.12%), Postives = 94/170 (55.29%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + A + NSTS+ E+F R+ +F M+ ++AF+HWY EG Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------VGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB2_ANEPH (Tubulin beta-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBB2 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.162e-30 Identity = 60/170 (35.29%), Postives = 94/170 (55.29%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T + +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP ++ A I NSTS+ E+F R+ +F M+ +AF+HWY GEG Sbjct: 209 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMRDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------VGLKMACTFIGNSTSIQEMFRRVRDQFTAMFRXKAFLHWYTGEG 370
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB1_HUMAN (Tubulin beta-1 chain OS=Homo sapiens GN=TUBB1 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.162e-30 Identity = 58/170 (34.12%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ + + LSVAE+T F+ + MA CD R G+Y+ ++RG + K+V+ + +++T+ + FV+W P K + PP + A I N+T++ E+F+R+ F M+ ++AFVHWY EG Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPP--------RGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB1_DAUCA (Tubulin beta-1 chain (Fragment) OS=Daucus carota GN=TUBB1 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 7.162e-30 Identity = 60/170 (35.29%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + L+P+PR+HF + +AP+ S + LSV E+T ++ +MM DPRHG+Y+ M+R + KD++ + ++ K + FV+W P K + PPT ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEG Sbjct: 109 RFPGQLNSDLRKLAVILIPFPRLHFFMVGFAPLTSRGSQQYRSLSVPELTQQMWDSKNMMCAADPRHGRYLTASAMFREKMSTKDLDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 270 The following BLAST results are available for this feature:
BLAST of CX288800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 403
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288800 ID=CX288800; Name=CX288800; organism=Citrus clementina; type=EST; length=511bpback to top |