CX288800
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB1_SUIBO (Tubulin beta-1 chain OS=Suillus bovinus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.919e-29 Identity = 58/170 (34.12%), Postives = 94/170 (55.29%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF ++ +AP+ + + ++V E+T F+ +MMA DPRHG+Y+ ++RG V K+V + ++ K + FV+W P PP V+ AV + NST++ E+F R+ F M+ ++AF+HWY EG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMTGFAPLTARGSQQYRAVTVPELTQQMFDAKNMMAASDPRHGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNVLSAQCDIPP--------RGVKMAVTFLGNSTAIQELFKRVSDHFTAMFKRKAFLHWYTQEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB1_COLGL (Tubulin beta-1 chain OS=Colletotrichum gloeosporioides GN=TUB1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.919e-29 Identity = 58/170 (34.12%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + NLVP+PR+HF +AP+ +A A ++ L VAE+T F+P ++M+ D R+G+++ C +YRG V K + + ++ K + FV+W P + PP + + I NST++ ++F R+ +F +M+ ++AF+HWY GEG Sbjct: 244 RFPGQLNADLRKLAVNLVPFPRLHFFTVGFAPLTTA--AAYQNLGVAELTQQMFDPKNVMSASDFRNGRFLTCSAIYRGKVSTKQIEEQIRGVQAKNSAYFVEWIPNNVQTAHCSIPP--------VGMNASSTFIGNSTAIQDIFRRVGDQFSVMFRRKAFLHWYTGEG 403
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_UNCNE (Tubulin beta chain OS=Uncinula necator PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.034e-28 Identity = 57/170 (33.53%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T ++P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMYDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.034e-28 Identity = 58/170 (34.12%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ + + ++V E+T+ F+ +MMA DPRHG+Y+ +RG V K+V + ++++K + FV+W P + + P G ++ +V I NST++ ++F RI +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTARGSQQYRAVTVPELTSQMFDAKNMMAASDPRHGRYLTVAAYFRGKVSMKEVEENMLSVQSKNSNYFVEWIPN----NVQTAHCDIAPRG----LKMSVTFIGNSTAIQDLFKRIADQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_LEIME (Tubulin beta chain OS=Leishmania mexicana PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.034e-28 Identity = 60/172 (34.88%), Postives = 97/172 (56.40%), Query Frame = 2 Query: 2 RFDGALNVDV-TEFQTNLVPYPRIHFMLSSYAPVIS-AEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ NLVP+PR+HF + +AP+ S + Y + LSVA++T F+ +MM DPRHG+Y+ ++RG + K+V+ + ++ K + F++W P K I PP ++ +V I N+T + E+F R+ +F M+ ++ F+HWY GEG Sbjct: 241 RFPGQLNSDLRNRLAVNLVPFPRLHFFMMGFAPLTSRGSQEYRQGLSVADVTQQMFDAKNMMQAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFIEWIPNNIKSSICDIPP--------KGLKMSVTFIGNNTCIQEMFRRVGEQFTGMFRRKRFLHWYTGEG 404
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_ERYGR (Tubulin beta chain OS=Erysiphe graminis subsp. hordei GN=TUB2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.034e-28 Identity = 58/170 (34.12%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQQKNVSYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_COCHE (Tubulin beta chain OS=Cochliobolus heterostrophus GN=TUB1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.034e-28 Identity = 58/170 (34.12%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +MMA D R+G+Y+ C +RG V K+V + ++ K + FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAYFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB2_ERYPI (Tubulin beta-2 chain OS=Erysiphe pisi GN=TUB2 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.034e-28 Identity = 57/170 (33.53%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T ++P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMYDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB2_EMENI (Tubulin beta-2 chain OS=Emericella nidulans GN=tubC PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.034e-28 Identity = 56/170 (32.94%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S + +SV E+T F+ +MM + ++G+++ C ++RG V K+V + ++ K + FV+W P + + PP ++ A + NSTSV E+F+R+ ++F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRSSSSFRTISVPELTQQMFDSRNMMTAANYQNGRFLTCSTLFRGKVAMKEVEDQMRNMQNKYSSYFVEWIPNNVQTALCSMPP--------KGLKMAATFVGNSTSVQELFNRVSNQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_BOTFU (Tubulin beta chain OS=Botryotinia fuckeliana GN=tubA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.351e-28 Identity = 57/170 (33.53%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T ++P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMYDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEG 402 The following BLAST results are available for this feature:
BLAST of CX288800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 403
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288800 ID=CX288800; Name=CX288800; organism=Citrus clementina; type=EST; length=511bpback to top |