CX288800
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB1_COLGR (Tubulin beta-1 chain OS=Colletotrichum graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.351e-28 Identity = 63/170 (37.06%), Postives = 93/170 (54.71%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + NLVP+PR+HF +AP+ S+ A L +AE+T F+P ++M D R G+++ C M+RG V K V + IK K + FV+W P + PP G D++ I NST++ F R+ +F LM+ ++AF+HWY GEG Sbjct: 241 RFPGQLNADLRKLAVNLVPFPRLHFFTVGFAPLTSS--ASFSNLGIAELTQQMFDPKNVMLASDFRDGRFLTCSTMFRGKVSMKQVEEQIQAIKNKNSANFVEWIPNNIQTAHCSVPP---KGLDVSST-----FIGNSTAIQNSFRRVGDQFSLMFRRKAFLHWYTGEG 400
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVI (Tubulin beta-1 chain OS=Trichoderma viride GN=tub1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.764e-28 Identity = 56/170 (32.94%), Postives = 94/170 (55.29%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T +P +MMA D R+G+Y+ C ++RG V K+V + T++ K + FV+W P + PP ++ + + NST++ E+F R+ +F M+ ++AF+HWY EG Sbjct: 243 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSPGAHSFRAVTVPELTQQMMDPKNMMAASDFRNGRYLTCSTIFRGKVAMKEVEDQMRTVQNKNSAYFVEWIPNNIQTACALSPP--------RGLKISSTFVGNSTAIQEIFRRVGEQFSAMFRRQAFLHWYTSEG 404
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_ASPFU (Tubulin beta chain OS=Aspergillus fumigatus GN=AFUA_7G00250 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.304e-28 Identity = 57/170 (33.53%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+ +MM C+ ++G+++ C ++RG + K+V+ + +I TK + FV+W P + + PP ++ + + NSTSV E+F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAQSFRAMSVPELTQQMFDSRNMMTACNFQNGRFLTCSALFRGKISMKEVDDQMLSIHTKNSGYFVEWIPNNVQTALCSVPP--------KGLKMSATFVGNSTSVQELFQRVATQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB2_SUIBO (Tubulin beta-2 chain OS=Suillus bovinus GN=TUBB2 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.009e-28 Identity = 60/170 (35.29%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + NLVP+PR+HF++ S+AP + ++LSV+E+T+S F+ +++ DPR G+Y+ ++RG V + +V ++ K + FV+W P + PP P +A ++NST + E+F R +F LM+ +RAF+HWY GEG Sbjct: 245 RFPGQLNGDLRKLGMNLVPFPRLHFLMPSFAPFYDPKARTFQRLSVSELTSSLFDKKNLLVASDPRFGRYLTAACIFRGKVSSHEAENSVMQLQRKNSNLFVEWIPDNVSVSLCSVPPVGQP--------QAAVALANSTCMQELFKRNLDQFALMFKRRAFLHWYTGEG 406
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVE (Tubulin beta-1 chain OS=Trichoderma virens PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.009e-28 Identity = 57/170 (33.53%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T +P +MMA D R+G+Y+ C ++RG V K+V + +I+ K + FV+W P + + PP ++ + + NST++ E+F R+ +F M+ ++AF+HWY EG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSPGAHSFRAVSVPELTQQMLDPKNMMAASDFRNGRYLTCSTIFRGKVAMKEVEDQMRSIQNKNSTYFVEWIPNNIQTALCSIPP--------KGLKISSTFVGNSTAIQEIFRRVGEQFTAMFRRKAFLHWYTSEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: YI016_HUMAN (Putative tubulin beta chain-like protein ENSP00000290377 OS=Homo sapiens PE=5 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 6.704e-28 Identity = 56/170 (32.94%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S + L+VAE+T F+ +M A DPRHG+Y+ +++G + ++V+ + I+ K + F DW P K I PP ++ + I N+ ++ E+F+ + +F M+ ++AF+HWY GEG Sbjct: 169 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMRAARDPRHGRYLTAAAIFQGRMPMREVDEQMFNIQDKNSSYFADWFPDNVKTAICDIPP--------RGLKMSASFIGNNAAIQELFTCVSEQFTAMFRRKAFLHWYTGEG 330
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_VENIN (Tubulin beta chain OS=Venturia inaequalis PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 8.755e-28 Identity = 57/170 (33.53%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +MMA D R+G+Y+ ++RG V K+V + ++ K + FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTSSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_UROFA (Tubulin beta chain OS=Uromyces fabae GN=TBB1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.143e-27 Identity = 56/170 (32.94%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + +AP+ + + ++V E+T+ F+ +MMA DPRHG+Y+ +RG V K+V + +++ K + FV+W P + + P + +V I NST++ ++F R+ +F M+ ++AF+HWY GEG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTARGSQQYRAITVPELTSQMFDAKNMMAASDPRHGRYLTVAAYFRGKVSMKEVEENMLSVQNKNSNYFVEWIPN----NVQTAHCDIAPRAH----KMSVTFIGNSTAIQDLFKRVADQFTAMFRRKAFLHWYTGEG 402
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB3_ANEPH (Tubulin beta-3 chain (Fragment) OS=Anemia phyllitidis GN=TUBB3 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.143e-27 Identity = 57/170 (33.53%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP ++ A I NS+S+ E+F R M+ ++AF+HWY EG Sbjct: 37 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQLINVQNKNSSYFVEWIPNNVKSSVCDIPP--------VGLKMACTFIGNSSSIQEMFRRDATSLTAMFRRKAFLHWYTWEG 198
BLAST of CX288800 vs. ExPASy Swiss-Prot
Match: TBB_PLESA (Tubulin beta chain OS=Pleurotus sajor-caju PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.547e-27 Identity = 56/170 (32.94%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 2 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 511 RF G LN D+ + N+VP+PR+HF + P+ + + ++V E+T F+ +MMA DPRHG+Y+ ++RG V K+V + ++ K + FV+W P PP + AV + NST++ E+F R++ +F M+ ++AF+HWY EG Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMPGVCPLTARGSQQYRAVTVPELTQQMFDAKNMMAASDPRHGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNVLTAQCDIPP--------RGCKMAVTFLGNSTAIQELFKRVNDQFAAMFKRKAFLHWYTQEG 402 The following BLAST results are available for this feature:
BLAST of CX288800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 403
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288800 ID=CX288800; Name=CX288800; organism=Citrus clementina; type=EST; length=511bpback to top |