CX288820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.660e-29 Identity = 68/155 (43.87%), Postives = 96/155 (61.94%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 LA T G GAD+ANV NEAAL+ AR +T E A+DRVIGG +K ++IS+ E++ AYHE GH +A W + EP+ KVTI+ RG G A VP E+ L T+ ++ +GGRAAE+++ + +TGA +D+EK TK+ + V Sbjct: 360 LAKRTVGMTGADLANVVNEAALLTARENGLVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEKATKIARSMV 513
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTU (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis GN=ftsH PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.698e-29 Identity = 67/155 (43.23%), Postives = 97/155 (62.58%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 LA T G GAD+ANV NEAAL+ AR + +T E A+DRVIGG +K ++IS+ E++ AYHE GH +A W + EP+ KVTI+ RG G A VP E+ L T+ ++ +GGRAAE+++ + +TGA +D+E+ TK+ + V Sbjct: 360 LAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEQATKIARSMV 513
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTA (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.698e-29 Identity = 67/155 (43.23%), Postives = 97/155 (62.58%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 LA T G GAD+ANV NEAAL+ AR + +T E A+DRVIGG +K ++IS+ E++ AYHE GH +A W + EP+ KVTI+ RG G A VP E+ L T+ ++ +GGRAAE+++ + +TGA +D+E+ TK+ + V Sbjct: 360 LAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEQATKIARSMV 513
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.698e-29 Identity = 67/155 (43.23%), Postives = 97/155 (62.58%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 LA T G GAD+ANV NEAAL+ AR + +T E A+DRVIGG +K ++IS+ E++ AYHE GH +A W + EP+ KVTI+ RG G A VP E+ L T+ ++ +GGRAAE+++ + +TGA +D+E+ TK+ + V Sbjct: 360 LAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEQATKIARSMV 513
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.698e-29 Identity = 64/162 (39.51%), Postives = 104/162 (64.20%), Query Frame = 2 Query: 56 QRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL----LLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQV 523 +++A TPGF GAD+ N+ NEAA++AAR E +++ + A++R+I G EKKN V+S+ ++R VAYHE+GHA+ G + +P+ K++I+PRG A G + P+E L ++ L + + LGGR AE+V+ G ++TGA ND +V+++ V Sbjct: 445 EKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMV 605
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.136e-28 Identity = 69/171 (40.35%), Postives = 107/171 (62.57%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTL-GGRAAEQVLLG--KISTGAQNDLEKVTKM 508 +V+++K+ L + +A TPGF+GAD+AN+ NEAAL AAR N V+M HFE A D+++ G E+++ V+S ++ + AYHE+GH + G + +P KVTI+PRG ALG ++P ++L Q + TL GGR AE+++ G +STGA ND++ T + Sbjct: 332 KVHMRKVPLSEDVD--PMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRG-QALGITFFLPESDILSISRQKLESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNL 499
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.938e-28 Identity = 63/156 (40.38%), Postives = 102/156 (65.38%), Query Frame = 2 Query: 59 RLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL----LLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKM 508 ++A TPGF GAD+ N+ NEAA++AAR E +++ + A++R+I G EKKN V+S+ ++R VAYHE+GHA+ G + +P+ K++I+PRG A G + P+E L ++ L + + LGGR AE+V+ G ++TGA ND +V+++ Sbjct: 458 KVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRV 612
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.531e-28 Identity = 67/171 (39.18%), Postives = 109/171 (63.74%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTL-GGRAAEQVLLG--KISTGAQNDLEKVTKM 508 +V+++++ L P + +A TPGF+GAD+AN+ NEAAL AARG V+M FE A D+++ G E+++ V+++ ++ + AYHE+GHA+ G + +P+ KVTI+PRG ALG ++P + + Q + TL GGR AE+++ G +STGA ND++ T + Sbjct: 332 KVHMRRVPL--APDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRG-RALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNL 499
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_ECOLI (Cell division protease ftsH OS=Escherichia coli (strain K12) GN=ftsH PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.531e-28 Identity = 67/171 (39.18%), Postives = 109/171 (63.74%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTL-GGRAAEQVLLG--KISTGAQNDLEKVTKM 508 +V+++++ L P + +A TPGF+GAD+AN+ NEAAL AARG V+M FE A D+++ G E+++ V+++ ++ + AYHE+GHA+ G + +P+ KVTI+PRG ALG ++P + + Q + TL GGR AE+++ G +STGA ND++ T + Sbjct: 332 KVHMRRVPL--APDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRG-RALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNL 499
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_ECO57 (Cell division protease ftsH OS=Escherichia coli O157:H7 GN=ftsH PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.531e-28 Identity = 67/171 (39.18%), Postives = 109/171 (63.74%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTL-GGRAAEQVLLG--KISTGAQNDLEKVTKM 508 +V+++++ L P + +A TPGF+GAD+AN+ NEAAL AARG V+M FE A D+++ G E+++ V+++ ++ + AYHE+GHA+ G + +P+ KVTI+PRG ALG ++P + + Q + TL GGR AE+++ G +STGA ND++ T + Sbjct: 332 KVHMRRVPL--APDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRG-RALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNL 499 The following BLAST results are available for this feature:
BLAST of CX288820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288820 ID=CX288820; Name=CX288820; organism=Citrus clementina; type=EST; length=531bpback to top |