CX288820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.277e-26 Identity = 66/158 (41.77%), Postives = 93/158 (58.86%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN--LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQV 523 +A TPGF+GA + NV NEA L+A R + + + + AIDRVI G KK++VIS +R+ VAYHE+GHA+ G + + + K+TI+PRG A G+ P L K L M +GGRAAE+ + G +I+TGA +D K T + A V Sbjct: 428 VAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDEAIDRVIAGPAKKSRVISDEDRKLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAG-GYTLSTPKSGDLNLKRKSDLLAMIATAMGGRAAEEEIYGNLEITTGASSDFYKATNIARAMV 584
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.277e-26 Identity = 64/171 (37.43%), Postives = 107/171 (62.57%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKM 508 +V+++K+ + + + LA TPG++GAD+AN+ NEAAL AAR VTM FE A D++ G E++ +++ ++ + AYHE+GHA+ G+ + +P+ KVTI+PRG ALG ++P + + ++++QL GR AE ++ G+ ISTGA ND++ T + Sbjct: 77 KVHMRKVSVAQDVD--AMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRG-RALGVTFFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNI 244
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.277e-26 Identity = 64/171 (37.43%), Postives = 107/171 (62.57%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKM 508 +V+++K+ + + + LA TPG++GAD+AN+ NEAAL AAR VTM FE A D++ G E++ +++ ++ + AYHE+GHA+ G+ + +P+ KVTI+PRG ALG ++P + + ++++QL GR AE ++ G+ ISTGA ND++ T + Sbjct: 331 KVHMRKVSVAQDVD--AMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRG-RALGVTFFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNI 498
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.176e-25 Identity = 66/157 (42.04%), Postives = 99/157 (63.06%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQV 523 +A TPGF+GAD+AN+ N AAL AA + VTM E A DR++ G E+K+ VIS R+ A+HE GHA+ E A P+ K TIVPRG ALG +P+ + ++++Q+ + +GGR AE+++ G ++++GA +DLE+ TK+ A V Sbjct: 421 IARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFAKDRIMMGSERKSAVISDESRKLTAFHEGGHALVAIHTEGALPVHKATIVPRG-MALGMVSQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQATKLARAMV 576
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.420e-25 Identity = 69/162 (42.59%), Postives = 96/162 (59.26%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEP----LLKVTIVPRGTAALGFAQYVP--NENLLLTKEQLFDMTCMTLGGRAAEQVLL-GKISTGAQNDLEKVTKMTYAQVA 526 +AA+T GF GAD+AN+ NEAAL+A R V F A++R I G+EKK+ + E+ VA HE GHAV G + + P + K++I+PR ALGF P + LL ++L LGGRAAE+V+L G++STGA +D+ + T M Y VA Sbjct: 546 IAAMTTGFTGADLANLVNEAALLAGRSNKEIVEKIDFICAVERSIAGIEKKHAKLKGNEKAVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYTPPTTEDRYLLFVDELRGRLVTLLGGRAAEEVVLSGRVSTGALDDIRRATDMAYKAVA 707
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.467e-25 Identity = 65/176 (36.93%), Postives = 108/176 (61.36%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQV 523 +V+ K D++ S + +A TPGF+GAD+AN+ NEAA++A R + ++ + + +IDR++ G+E K + VAYHE GHAV G + + KVT++PRG A G ++P+++ L++K+QLF LGGRAAE+++ G +++TGA DL+++T + V Sbjct: 407 KVHAGNKKFDNDVSL--EIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLARQMV 578
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.620e-25 Identity = 60/157 (38.22%), Postives = 99/157 (63.06%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQV 523 +A TPGF+GAD+AN+ NEAA++A R + ++ + + +IDR++ G+E K + VAYHE GHA+ G +P+ KVT++PRG A G ++P ++ L++++QLF LGGRAAE+++ G +++TGA DL+++T + V Sbjct: 411 IAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEIDDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAICGTLTPGHDPVQKVTLIPRGQAR-GLTWFIPMDDPTLISRQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITGLAKQMV 565
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 9.952e-25 Identity = 61/157 (38.85%), Postives = 100/157 (63.69%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQV 523 +A TPGF+GAD+AN+ NEAA++A R + ++ + + +IDR++ G+E K + VAYHE GHA+ G + + KVT++PRG A G ++P+++ L++K+QLF LGGRAAE+V+ G +++TGA +DL+++T + V Sbjct: 417 IAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQITGLAKQMV 571
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.300e-24 Identity = 63/158 (39.87%), Postives = 98/158 (62.03%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN--LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQV 523 +A TPGF+GAD+AN+ NEAA++A R ++T+ + +IDR++ GLE + K + VAYHE GHAV + + KVT++PRG A G ++P E L++++Q+F LGGRAAE+V+ G +++TGA DL++VT++ V Sbjct: 419 VAMRTPGFSGADLANLMNEAAILAGRRGKDRITVSEIDDSIDRIVAGLEGTSMTDGK-SKMLVAYHEIGHAVCATLTAGHDEVQKVTLIPRGQAR-GLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGAAGDLQQVTRVARRMV 574
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.697e-24 Identity = 63/156 (40.38%), Postives = 93/156 (59.62%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQV 523 +A TPGF+GAD+AN+ N AAL AA VTM E A DR++ G E+K+ VIS R+ AYHE GHA+ E A P+ K TIVPRG A AQ + ++++Q+ + +GGR AE+++ G ++++GA +D ++ T + A V Sbjct: 424 IARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDLEYAKDRIMMGSERKSAVISDESRKLTAYHEGGHALVAIHTEGAHPVHKATIVPRGMALGMVAQLPDKDETSVSRKQMLARLDVCMGGRVAEELIFGDSEVTSGASSDFQQATAVARAMV 579 The following BLAST results are available for this feature:
BLAST of CX288820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288820 ID=CX288820; Name=CX288820; organism=Citrus clementina; type=EST; length=531bpback to top |