CX288822
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 3.932e-41 Identity = 74/135 (54.81%), Postives = 98/135 (72.59%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D K F+ L S+NYNR+GFGH+ E + EY S +I+++++ + G+V ++LA+++GFCWGVERAV +AYE RK FP E+IWITNEIIHNP+VN R++EM V IPVE G K F VV DVV+LPAFG Sbjct: 2 DTKTFKRTLQHSENYNRKGFGHQAEVATQLQSEYQSSLIQEIRDRNYTLQRGDVTIRLAQAFGFCWGVERAVAMAYETRKHFPTERIWITNEIIHNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 3.932e-41 Identity = 74/135 (54.81%), Postives = 98/135 (72.59%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D K F+ L S+NYNR+GFGH+ E + EY S +I+++++ + G+V ++LA+++GFCWGVERAV +AYE RK FP E+IWITNEIIHNP+VN R++EM V IPVE G K F VV DVV+LPAFG Sbjct: 2 DTKTFKRTLQHSENYNRKGFGHQAEVATQLQSEYQSSLIQEIRDRNYTLQRGDVTIRLAQAFGFCWGVERAVAMAYETRKHFPTERIWITNEIIHNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_SYNSC (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9605) GN=ispH PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 5.135e-41 Identity = 76/135 (56.30%), Postives = 97/135 (71.85%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D F+ +L S+ YNRRGFG EE E + Q Y S +I +++NG+ G + V+LAE++GFCWGVERAV +AYE RK +P E++WITNEIIHNP+VN+ L EM VQ IPVE+G K F V GDVV+LPAFG Sbjct: 2 DTHAFKRSLHHSERYNRRGFGRAEEVAESLEQAYQSGLIGTIRDNGYRLEHGRLNVRLAEAFGFCWGVERAVAMAYETRKHYPSERLWITNEIIHNPSVNDHLREMDVQFIPVEQGVKDFSGVTSGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9902) GN=ispH PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.494e-40 Identity = 76/135 (56.30%), Postives = 97/135 (71.85%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D F+ +L S+ YNRRGFG EE E + Q Y S +I +++NG++ T G + V LAE++GFCWGVERAV +AYE R+ +P E++WITNEIIHNP+VN+ L EM V IPVEEG K F V GDVV+LPAFG Sbjct: 2 DTHAFKRSLHHSERYNRRGFGRAEEVAENLEQAYQSGLIGTIRDNGYKLTHGRLNVHLAEAFGFCWGVERAVAMAYETRRHYPSERLWITNEIIHNPSVNDHLREMDVLFIPVEEGVKDFSGVTSGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPW (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH7803) GN=ispH PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.494e-40 Identity = 75/135 (55.56%), Postives = 96/135 (71.11%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D F+ +L SD YNRRGFG EE + Q Y S +I +++NG+ G ++V+LA+ +GFCWGVERAV +AYE RK +P E++WITNEIIHNP+VN+ L EM VQ IPVE+G K F V GDVV+LPAFG Sbjct: 2 DTHAFKRSLHHSDRYNRRGFGRAEEVAGSLEQAYQSSLIGSIRDNGYRLNHGRLQVRLAKDFGFCWGVERAVAMAYETRKHYPSERLWITNEIIHNPSVNDHLREMNVQFIPVEQGVKDFSGVTSGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP8 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 8801) GN=ispH PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.548e-40 Identity = 70/135 (51.85%), Postives = 103/135 (76.30%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D K F+ +L +S+NY+R+GFG E + +MN EY S +I+++++N +++ GNV + LA+++GFCWGVERAV +AYE R+ FP+E IWITNE+IH+P+VN RLE+M ++ I V G+K F + GDVV+LPAFG Sbjct: 2 DTKAFKRSLQQSENYHRKGFGQTEAAMGVMNTEYQSSLIQQIRQNNYQWKQGNVTIHLAQAFGFCWGVERAVAMAYETRQHFPKESIWITNELIHHPSVNQRLEQMEIKFIEVINGQKDFSQIKSGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_NOSP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispH PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.328e-40 Identity = 72/135 (53.33%), Postives = 100/135 (74.07%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D K F+ +L S+NYNR+GFGH+ E + EY S++I+++++ + G+V ++LA+++GFCWGVERAV +AYE R+ FP E IWITNEIIHNP+VN R++EM V+ IP+E K F VV GDVV+LPAFG Sbjct: 2 DTKAFKRSLQHSENYNRKGFGHQAEVATQLQSEYQSNLIQEIRDRNYILQRGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPTEHIWITNEIIHNPSVNQRMQEMEVEFIPIEGKNKDFSVVGTGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 4.347e-40 Identity = 76/136 (55.88%), Postives = 102/136 (75.00%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPAFG 501 D K F+ +L S+ Y+R+GFGH+ E E++ EY S +I++++ENG + G V ++LAE++GFCWGVERAV +AYE R+ FP E+IWITNEIIHNP+VN L EM V+ IPV E+G+K F VV DVV+LPAFG Sbjct: 2 DTKAFKRSLHSSNQYHRKGFGHEAEVTEMLRFEYQSSLIQQIRENGNRFQRGEVTIQLAEAFGFCWGVERAVALAYETRQHFPTERIWITNEIIHNPSVNQNLREMQVEFIPVDEQGQKDFSVVAGEDVVILPAFG 137
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9311) GN=ispH PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.157e-39 Identity = 75/135 (55.56%), Postives = 96/135 (71.11%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D F+ +L SD YNRRGFG +E + Q Y S +I +++NG+ T G +KV+LAE++GFCWGVERAV +AYE R+ +P+E+IWITNEIIHNP+VN+ L EM V I VE G K F V GDVV+LPAFG Sbjct: 2 DTHAFKRSLHHSDRYNRRGFGRADEVAGSLEQAYQSSLIGSIRDNGYSLTHGRLKVRLAEAFGFCWGVERAVAMAYETRRHYPQERIWITNEIIHNPSVNDHLREMDVLFISVEGGVKDFSGVATGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_PROMS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain AS9601) GN=ispH PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.680e-39 Identity = 71/135 (52.59%), Postives = 97/135 (71.85%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D + FR +L SD YNRRGF + + + + Y SD+I +++NGF YT G + +KLA+++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN+ L +M V+ I + G K F +V+ GDVV+LPAFG Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLISSIRDNGFTYTKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFG 136 The following BLAST results are available for this feature:
BLAST of CX288822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288822 ID=CX288822; Name=CX288822; organism=Citrus clementina; type=EST; length=501bpback to top |