CX288822
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_PROM0 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=ispH PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.680e-39 Identity = 71/135 (52.59%), Postives = 97/135 (71.85%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D + FR +L SD YNRRGF + + + + Y SD+I +++NGF YT G + +KLA+++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN+ L +M V+ I + G K F +V+ GDVV+LPAFG Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLISSIRDNGFTYTKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_PROM9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=ispH PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.826e-38 Identity = 70/135 (51.85%), Postives = 96/135 (71.11%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D + FR +L SD YNRRGF + + + + Y SD+I +++NGF Y G + +KLA+++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN+ L +M V+ I + G K F +V+ GDVV+LPAFG Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLISSIRDNGFTYNKGRLNIKLAKAFGFCWGVERAVAMAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_PROMM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=ispH PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 9.064e-38 Identity = 72/135 (53.33%), Postives = 93/135 (68.89%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D + F+ +L S+ YNRRGFG E + + Y S +I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E+IWITNEIIHNP+VN L EM V I E G K F VN GDVV+LPAFG Sbjct: 2 DTQAFKRSLHHSERYNRRGFGRANEVASNLEKAYQSSLIGSIRDNGYVLQHGRLQVKLAEAFGFCWGVERAVAMAYETRRHYPSERIWITNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVNDGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_TRIEI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=ispH PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.184e-37 Identity = 67/135 (49.63%), Postives = 98/135 (72.59%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D K F L +S+NYNR+GFGH +E LM Y S++I++++EN + G V +KLA+++GFCWGVER+V +AYE R+ FP ++IWI+ E+IHNP+VN +++M ++ IPV +G+K F V DVV+LPAFG Sbjct: 2 DTKAFTRALKKSENYNRQGFGHAQEVATLMQSAYKSNLIQQIRENNYTLQRGEVTIKLAKTFGFCWGVERSVAMAYETRQHFPNQQIWISYELIHNPSVNQDMKDMEIKFIPVIDGQKDFSVAGNNDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_PROMT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=ispH PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.184e-37 Identity = 73/135 (54.07%), Postives = 95/135 (70.37%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D + F+ L +SD YNRRGFG + + + + Y S +I ++ENG G +KVKLAE++GFCWGVER+V +AYE RK +P E+IWITNEIIHNP+VN+ L +M V I E+G K F VV GDVV+LPAFG Sbjct: 2 DTQAFKQTLHKSDRYNRRGFGSANKRAQALAEAYQSGLIGSIRENGNLLEHGRLKVKLAEAFGFCWGVERSVAMAYETRKHYPNERIWITNEIIHNPSVNDHLRKMNVLFISEEKGVKDFSVVKDGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_PROM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=ispH PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.184e-37 Identity = 73/135 (54.07%), Postives = 95/135 (70.37%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D + F+ L +SD YNRRGFG + + + + Y S +I ++ENG G +KVKLAE++GFCWGVER+V +AYE RK +P E+IWITNEIIHNP+VN+ L +M V I E+G K F VV GDVV+LPAFG Sbjct: 2 DTQAFKQTLHKSDRYNRRGFGSANKRAQALAEAYQSGLIGSIRENGNLLEHGRLKVKLAEAFGFCWGVERSVAMAYETRKHYPNERIWITNEIIHNPSVNDHLRKMNVLFISEEKGVKDFSVVKDGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_PROMP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispH PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.546e-37 Identity = 69/135 (51.11%), Postives = 95/135 (70.37%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D + FR +L SD YNRRGF + + + + Y SD+I ++ N F Y G + +KLA+++GFCWGVERAV +AYE R+ +P+E IWITNEIIHNP+VN+ L +M V+ I + G K F +V+ GDVV+LPAFG Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLITSIRNNSFTYKKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPDENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSDGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_PROM3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=ispH PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.444e-37 Identity = 71/135 (52.59%), Postives = 93/135 (68.89%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D + F+ +L S+ YNRRGFG E + + Y S +I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E+IWITNEIIHNP+VN L EM V I E G K F V+ GDVV+LPAFG Sbjct: 2 DTQAFKRSLHHSERYNRRGFGRANEVASNLEKAYQSSLIGSIRDNGYVLQHGRLQVKLAEAFGFCWGVERAVAMAYETRRHYPSERIWITNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVSDGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_PROM4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9211) GN=ispH PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 4.498e-37 Identity = 69/135 (51.11%), Postives = 97/135 (71.85%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D + F+ +L SD YNRRGF + + + + Y S++I +++NG+ + G ++VKLAE++GFCWGVERAV +AYE R+ +P+E IWITNEIIHNP+VN+ L M V+ I E+G K F V +GDVV+LPAFG Sbjct: 2 DTQAFKRSLHHSDRYNRRGFESPTKRAQALEKAYQSNLIGSIRDNGYLFEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPKESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKNFSSVQEGDVVILPAFG 136
BLAST of CX288822 vs. ExPASy Swiss-Prot
Match: ISPH_PROMA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus GN=ispH PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.709e-36 Identity = 69/135 (51.11%), Postives = 95/135 (70.37%), Query Frame = 1 Query: 97 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNNRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 501 D + F+ +L SD YNRRGF + + + + Y S++I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN+ L M V+ I E+G K F V +GDVV+LPAFG Sbjct: 2 DTQAFKRSLHHSDRYNRRGFESPAKRAQALEKAYQSNLIASIRDNGYLLEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPTESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKDFSSVEEGDVVILPAFG 136 The following BLAST results are available for this feature:
BLAST of CX288822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288822 ID=CX288822; Name=CX288822; organism=Citrus clementina; type=EST; length=501bpback to top |