CX288823

Overview
NameCX288823
Unique NameCX288823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN1_ORYSJ (Endoglucanase 1 OS=Oryza sativa subsp. japonica GN=GLU7 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 8.356e-67
Identity = 115/202 (56.93%), Postives = 147/202 (72.77%), Query Frame = 3
Query:   18 HAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS---MVNNHKEHEQVLERYGSKAEFY 614
            HA++A++WG DYF+KAH  P+VL+ EVGDGD+DH CWQRPEDMTTSR+AY++D ++PGSD+AGET       S+VFR  NP Y++ LL H++QLF+F DKYRGKYD S+ VVK +Y S SGY DELLWA+ WLY+ATDN  YL Y+ +N D  GG  WA  EF WDVKY GVQ++A+   +      H  VL RY   A+ +
Sbjct:  128 HAMDAVRWGADYFVKAHPAPNVLYGEVGDGDSDHVCWQRPEDMTTSRQAYRLDPQHPGSDLAGETATALAAASLVFRSSNPGYANQLLQHSKQLFDFADKYRGKYDDSMPVVKKFYGSFSGYGDELLWASAWLYQATDNRRYLDYLANNGDALGGTGWATNEFGWDVKYPGVQVLAAKFLLQGKAGPHAAVLRRYQRNADVF 329          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN13_ORYSJ (Endoglucanase 13 OS=Oryza sativa subsp. japonica GN=GLU6 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 8.647e-64
Identity = 110/205 (53.66%), Postives = 146/205 (71.22%), Query Frame = 3
Query:   15 HHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMV-----NNHKEHEQVLERYGSKAEFY 614
            H  ++AI+WGT+YF+KAHT  + LWV+VGDGD+DH CW+R EDM+T R A+K+D  NPGS+VAGET       +  F+  +  YS LLL H++QLF F D +RGKYD S++  K +YPS SGY DELLWAA WLY+AT +E YL+YV  NA+ FGG  WA+TEFSWD KYAG+Q++ S V      +   +   L++Y +KAEF+
Sbjct:  124 HRVLDAIRWGTNYFVKAHTQHNALWVQVGDGDSDHLCWERAEDMSTPRTAFKIDINNPGSEVAGETAAALAAAAKAFKPYDRMYSDLLLLHSKQLFTFADTFRGKYDDSLQSAKKFYPSASGYQDELLWAAAWLYEATGDEQYLRYVSQNAEAFGGTGWAVTEFSWDNKYAGLQVLLSKVLFEQGGSAAGYADTLKQYQAKAEFF 328          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN13_ORYSI (Endoglucanase 13 OS=Oryza sativa subsp. indica GN=GLU6 PE=3 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 8.647e-64
Identity = 110/205 (53.66%), Postives = 146/205 (71.22%), Query Frame = 3
Query:   15 HHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMV-----NNHKEHEQVLERYGSKAEFY 614
            H  ++AI+WGT+YF+KAHT  + LWV+VGDGD+DH CW+R EDM+T R A+K+D  NPGS+VAGET       +  F+  +  YS LLL H++QLF F D +RGKYD S++  K +YPS SGY DELLWAA WLY+AT +E YL+YV  NA+ FGG  WA+TEFSWD KYAG+Q++ S V      +   +   L++Y +KAEF+
Sbjct:  124 HRVLDAIRWGTNYFVKAHTQHNALWVQVGDGDSDHLCWERAEDMSTPRTAFKIDINNPGSEVAGETAAALAAAAKAFKPYDRMYSDLLLLHSKQLFTFADTFRGKYDDSLQSAKKFYPSASGYQDELLWAAAWLYEATGDEQYLRYVSQNAEAFGGTGWAVTEFSWDNKYAGLQVLLSKVLFEQGGSAAGYADTLKQYQAKAEFF 328          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN5_ARATH (Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g48930 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.017e-61
Identity = 109/198 (55.05%), Postives = 141/198 (71.21%), Query Frame = 3
Query:   30 AIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMV---NNHKEHEQVLERYGSKAEFY 614
            +I+WGTDYFIKAH  P+VLW +VGDG++DHYCW+RPEDMTTSR AYK+D  +PGSD+AGET       S+ F+  N  YS LLL HA++LF F DKYRG Y +SI   K +Y S SGY DELLWAA WL++AT ++ YLKY +DN+   GG  W + EFSWD KYAGVQI+ S +        +   L++Y +KA+++
Sbjct:  121 SIRWGTDYFIKAHPQPNVLWGQVGDGESDHYCWERPEDMTTSRTAYKLDPYHPGSDLAGETAAALAAASLAFKPFNSSYSALLLSHAKELFSFADKYRGLYTNSIPNAKAFYMS-SGYSDELLWAAAWLHRATGDQYYLKYAMDNSGYMGGTGWGVKEFSWDNKYAGVQILLSKILLEGKGGIYTSTLKQYQTKADYF 317          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN20_ARATH (Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23560 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.311e-47
Identity = 91/194 (46.91%), Postives = 124/194 (63.92%), Query Frame = 3
Query:   33 IKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFY 614
            IKWGTD+ ++AHT P++L+ +VGDG++DH CW+RPEDM TSR  Y +   +PGS+ AGE        S+VF+ ++  YS  LL+HA+ LFEF DKYRG Y +S      +Y S SGY DELLWAA WLYKAT ++ Y+ YV+ N D     + A+ EFSWD K+ G Q  A +V+        L ++ S  E +
Sbjct:  115 IKWGTDFILRAHTSPNMLYTQVGDGNSDHSCWERPEDMDTSRTLYSISSSSPGSEAAGEAAAALAAASLVFKSVDSTYSSTLLNHAKTLFEFADKYRGSYQASCP----FYCSYSGYQDELLWAAAWLYKATGDKIYINYVISNKD----WSQAVNEFSWDNKFVGAQ--ALLVSEFYNGANDLAKFKSDVESF 298          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN14_ARATH (Endoglucanase 14 OS=Arabidopsis thaliana GN=At2g44560 PE=2 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 6.883e-45
Identity = 92/203 (45.32%), Postives = 128/203 (63.05%), Query Frame = 3
Query:    6 REHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS--MVNNHKEHEQVLERYGSKAE 608
            +E  +A+ A+KW TD+ IKAH  P+VL+ +VGDG++DH CW RPEDMTT R ++++D ++PGSD+AGET       SI F   +  Y+ +L+ HA++LFEF   Y G Y +SI    G+Y S SGY DELLWAA WL++AT+++ YL Y L  A   GG     T FSWD K+ G Q++ +   +    E    +  Y S AE
Sbjct:  116 QEQENALAALKWATDFLIKAHPEPNVLYGQVGDGNSDHECWMRPEDMTTPRPSFRIDAQHPGSDLAGETAAAMAAASIAFAPSDEAYAQILIGHAKELFEFAKAYPGIYQNSITNAGGFYAS-SGYEDELLWAAAWLHRATNDQIYLDY-LTQASGTGG---PRTAFSWDDKFVGAQVLVAKLALEGKVESNGKIAEYKSMAE 313          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN13_ARATH (Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44550 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.174e-44
Identity = 94/207 (45.41%), Postives = 133/207 (64.25%), Query Frame = 3
Query:    6 REHH---HAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIA---SMVNNHKEHEQVLERYGSKAE 608
            R HH   +A+ A+KW TDY IKAH  P+VL+ +VG+G++DH CW RPEDMTT R +Y++D ++PGSD+AGET       SI F   +  Y+++L+ HA+ LF F   +RG Y +SI    G+Y S SGY DELLWAA WL++AT+++ YL Y L  A+  G      T F+WD K+ G Q++    ++    +  EQ++E Y S AE
Sbjct:  113 RAHHEKGNALRALKWATDYLIKAHPQPNVLYGQVGEGNSDHKCWMRPEDMTTPRTSYRIDAQHPGSDLAGETAAAMAAASIAFAPSDKAYANILIGHAKDLFAFAKAHRGLYQNSIPNAGGFYAS-SGYEDELLWAAAWLHRATNDQIYLDY-LTEAETGG----PRTVFAWDDKFVGAQVLVAKLALEGKVESSEQIVE-YKSMAE 312          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN15_ARATH (Endoglucanase 15 OS=Arabidopsis thaliana GN=At2g44570 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.416e-44
Identity = 92/203 (45.32%), Postives = 130/203 (64.04%), Query Frame = 3
Query:    6 REHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQI-IASMVNNHK-EHEQVLERYGSKAE 608
            +EH + + A++W TDY IKAH  P+VL+ +VGD + DH CW RPEDMTT R +Y++D ++PG+D+AGET       S+ F   +  Y+  L+ HA++LFEF   Y G Y +SI    G+YPS SGY DELLWAA WL++AT ++ YL + L  A   GG   A + F+WD K+ G Q+ +A +V   K ++E  +  Y S AE
Sbjct:  116 QEHGNTLAALRWATDYLIKAHPEPNVLYGQVGDANLDHACWMRPEDMTTPRPSYRIDPQHPGADLAGETAAAMAAASLAFAPSDSAYAKTLISHAKELFEFAKDYPGVYHNSIPNAGGFYPS-SGYEDELLWAAAWLHRATGDQTYLDH-LTQASNSGG---ARSVFAWDDKFLGAQVLVAKLVFEGKVKNEGKMIEYKSMAE 313          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN_PHAVU (Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 4.462e-44
Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = 3
Query:   30 AIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQII 542
            AI+WG D+ ++AHT P  L+ +VGDG+ DH CW+RPEDM T R  YK+D  +PG++VA E        SIVF+K++  YS  LL H++ LF+F DK RG Y  S      +Y S SGY DELLWAA WLYKA+    YL Y++ N     G +  ++EFSWD K+ G Q +
Sbjct:  131 AIRWGADFMLRAHTSPTTLYTQVGDGNADHNCWERPEDMDTPRTVYKIDANSPGTEVAAEYAAALSAASIVFKKIDAKYSSTLLSHSKSLFDFADKNRGSYSGSCP----FYCSYSGYQDELLWAAAWLYKASGESKYLSYIISNQ----GWSQTVSEFSWDNKFVGAQTL 293          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN8_ARATH (Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.462e-44
Identity = 88/182 (48.35%), Postives = 119/182 (65.38%), Query Frame = 3
Query:    9 EHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSI-EVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRF-GGITWAITEFSWDVKYAGVQIIAS 548
            E  +A++A+KWGTDY +KA   P V++V+VGD  +DH CW+RPEDM T R  YK+D  +PGSDVAGET       SIVFRK +P YS LLL  A ++F F ++YRG Y +S+   V  +Y   +GY DELLW A WL+KA+   AY ++++ N      G T  I EF WD K+AG+ ++ S
Sbjct:  110 ELRNAVKAVKWGTDYLLKATAIPGVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDRAHPGSDVAGETAAALAAASIVFRKRDPAYSRLLLDRATRVFAFANRYRGAYSNSLYHAVCPFYCDFNGYQDELLWGAAWLHKASRKRAYREFIVKNEVILKAGDT--INEFGWDNKHAGINVLIS 289          
The following BLAST results are available for this feature:
BLAST of CX288823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GUN1_ORYSJ8.356e-6756.93Endoglucanase 1 OS=Oryza sativa subsp. japonica GN... [more]
GUN13_ORYSJ8.647e-6453.66Endoglucanase 13 OS=Oryza sativa subsp. japonica G... [more]
GUN13_ORYSI8.647e-6453.66Endoglucanase 13 OS=Oryza sativa subsp. indica GN=... [more]
GUN5_ARATH4.017e-6155.05Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g489... [more]
GUN20_ARATH4.311e-4746.91Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23... [more]
GUN14_ARATH6.883e-4545.32Endoglucanase 14 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN13_ARATH1.174e-4445.41Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN15_ARATH3.416e-4445.32Endoglucanase 15 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN_PHAVU4.462e-4447.95Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2[more]
GUN8_ARATH4.462e-4448.35Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE... [more]

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Properties
Property NameValue
Genbank descriptionC02004G09SK IF1 Citrus clementina cDNA clone C02004G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288823 ID=CX288823; Name=CX288823; organism=Citrus clementina; type=EST; length=616bp
GCACGAGGGAGCATCATCATGCAATTGAGGCCATCAAGTGGGGAACTGAT
TATTTCATCAAAGCTCACACTCACCCTCATGTATTATGGGTTGAGGTGGG
TGATGGAGACACCGATCACTACTGTTGGCAGCGGCCGGAAGACATGACGA
CGTCGCGGCGTGCTTACAAAGTAGACGAGAGAAACCCCGGCTCGGATGTC
GCCGGAGAGACGGCAGCGGCAATGGCGGCAGCATCAATTGTGTTTAGGAA
ACTAAACCCACATTACTCTCACCTACTATTGCACCACGCGCAACAGTTGT
TTGAGTTTGGTGACAAGTACAGAGGGAAATACGACAGTAGTATAGAGGTA
GTGAAGGGGTACTATCCGTCGGTTAGTGGATACATGGACGAGTTGTTATG
GGCGGCTGTGTGGCTATACAAGGCAACCGACAACGAGGCGTATTTGAAGT
ACGTGCTTGATAATGCCGATCGTTTTGGTGGGATCACTTGGGCCATTACT
GAATTTAGCTGGGATGTTAAGTACGCTGGCGTTCAAATCATCGCTTCAAT
GGTGAATAATCACAAGGAACACGAGCAAGTTCTTGAACGATACGGTTCGA
AAGCTGAATTTTATCT
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