CX288823

Overview
NameCX288823
Unique NameCX288823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN3_ORYSJ (Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.462e-44
Identity = 86/179 (48.04%), Postives = 113/179 (63.13%), Query Frame = 3
Query:    9 EHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIE-VVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQII 542
            E  HA +A++WG+DY +KA  HP  ++V+VGD + DH CW+RPEDM T R  YKVD   PG+DVA ET       S+VFRK +P Y+  L+  A+++FEF DK+RG Y + +   V  YY S SGY DELLW A WL++AT N  YL Y+  N    G      T F WD K+AG +I+
Sbjct:  117 ELQHARDAVRWGSDYLLKATAHPDTVYVQVGDANRDHACWERPEDMDTPRTVYKVDPSTPGTDVAAETAAALAAASLVFRKSDPAYASRLVARAKRVFEFADKHRGTYSTRLSPYVCPYYCSYSGYQDELLWGAAWLHRATKNPTYLSYIQMNGQVLGADEQDNT-FGWDNKHAGARIL 294          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN1_ARATH (Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.827e-44
Identity = 87/178 (48.88%), Postives = 113/178 (63.48%), Query Frame = 3
Query:   18 HAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSI-EVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS 548
            +A +AI+W TD+ +KA +HP  ++V+VGD + DH CW+RPEDM T R  +KVD+ NPGSD+AGE        SIVFRK +P YS+ LL  A  +F F DKYRG Y + +   V  +Y S SGY DELLW A WL KAT+N  YL Y+  N    G   +    FSWD K+ G +I+ S
Sbjct:  128 NAKDAIRWATDFLLKATSHPDTIYVQVGDPNMDHACWERPEDMDTPRSVFKVDKNNPGSDIAGEIAAALAAASIVFRKCDPSYSNHLLQRAITVFTFADKYRGPYSAGLAPEVCPFYCSYSGYQDELLWGAAWLQKATNNPTYLNYIKANGQILGADEFD-NMFSWDNKHVGARILLS 304          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN18_ARATH (Endoglucanase 18 OS=Arabidopsis thaliana GN=At4g09740 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.695e-43
Identity = 87/174 (50.00%), Postives = 115/174 (66.09%), Query Frame = 3
Query:   33 IKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQ--QLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITW--AITEFSWDVKYAGVQII 542
            IKWGT++ ++AHT  ++L+ +VGDG++DH CW+RPEDM T R  Y +   +PGS+ AGE        S+VF+ ++  YS  LL++A+   LFEF DKYRG Y +S      +Y S SGY DELLWAA WLYKAT  ++YL YV+ N D      W  AI EFSWD K+AGVQ +
Sbjct:  115 IKWGTNFILRAHTSTNMLYTQVGDGNSDHSCWERPEDMDTPRTLYSISSSSPGSEAAGEAAAALAAASLVFKLVDSTYSSKLLNNAKSVSLFEFADKYRGSYQASCP----FYCSHSGYQDELLWAAAWLYKATGEKSYLNYVISNKD------WSKAINEFSWDNKFAGVQAL 278          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN17_ORYSJ (Endoglucanase 17 OS=Oryza sativa subsp. japonica GN=GLU13 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.777e-43
Identity = 89/177 (50.28%), Postives = 111/177 (62.71%), Query Frame = 3
Query:   21 AIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIE-VVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS 548
            A EA++W TDY +KA   P+ ++V+VGD   DH CW+RPEDM T R  YKVD  +PGSDVA ET       SIVFR  +P YS+ LL  A Q+FEF DKYRG Y SS+   V   Y   SGY DELLW A WL+KA+    Y  Y+  N +   G + AI EF WD K+AG+ ++ S
Sbjct:  110 AREAVRWATDYLMKATATPNTVYVQVGDAFRDHSCWERPEDMDTPRTVYKVDPSHPGSDVAAETAAALAAASIVFRDADPDYSNRLLDRAIQVFEFADKYRGPYSSSLHAAVCPCYCDYSGYKDELLWGAAWLHKASRRREYRDYIKRN-EVVLGASEAINEFGWDNKHAGINVLIS 285          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN2_ARATH (Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g19940 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.933e-43
Identity = 86/187 (45.99%), Postives = 117/187 (62.57%), Query Frame = 3
Query:   18 HAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGI---TWAITEFSWDVKYAGVQIIASMVNNHKE 569
            HA +++KW TD+ I AH  P+VL+++VGD  TDH CW RPE MT  R   K+D + PG++VA ET       S+VF++ +  YS  LL HA+QLF+F D  RG Y  +I  V+ YY S +GY DELLWAA WLY AT+++ YL +V +N + FG     +W    FSWD K  G  I+ S +   K+
Sbjct:  134 HAKDSLKWTTDFLINAHPSPNVLYIQVGDPVTDHKCWDRPETMTRKRTLTKIDTKTPGTEVAAETAAAMAAASLVFKESDTKYSSTLLKHAKQLFDFADNNRGSYSVNIPEVQSYYNS-TGYGDELLWAASWLYHATEDQTYLDFVSENGEEFGNFGSPSW----FSWDNKLPGTHILLSRLTFFKK 315          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN12_ARATH (Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44540 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.933e-43
Identity = 85/182 (46.70%), Postives = 120/182 (65.93%), Query Frame = 3
Query:    6 REHH---HAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQII 542
            R HH   +++ A+KW TDY IKAH  P+VL+ +VG+G++DH CW RPEDMTT R +Y++D ++PGSD+AGET       SI F   +  Y+++L+ HA+ LF F   + G Y +SI    G+Y S SGY DELLWAA WL++AT+++ YL Y L  A   GG     + F+WD K+ G Q++
Sbjct:  113 RAHHEQGNSLRALKWATDYLIKAHPQPNVLYGQVGEGNSDHKCWMRPEDMTTPRTSYRIDAQHPGSDLAGETAAAMAAASIAFAPFDKAYANILIGHAKDLFAFAKAHPGLYQNSITNAGGFYAS-SGYEDELLWAAAWLHRATNDQIYLNY-LTQASGTGG---PRSVFAWDDKFVGAQVL 289          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN17_ARATH (Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.448e-42
Identity = 91/190 (47.89%), Postives = 116/190 (61.05%), Query Frame = 3
Query:    9 EHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEV-VKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQII---ASMVNNHK 566
            E  +A  AI+W TDY +KA + P  ++V+VGD + DH CW+RPEDM T R  +KVD+  PGSDVA ET       +IVFRK +P YS +LL  A  +F F DKYRG Y + ++  V  +Y S SGY DELLW A WL KAT N  YL Y+  N    G   +  T F WD K+AG +I+   A +V N K
Sbjct:  134 ELQNAKIAIRWATDYLLKATSQPDTIYVQVGDANKDHSCWERPEDMDTVRSVFKVDKNIPGSDVAAETAAALAAAAIVFRKSDPSYSKVLLKRAISVFAFADKYRGTYSAGLKPDVCPFYCSYSGYQDELLWGAAWLQKATKNIKYLNYIKINGQILGAAEYDNT-FGWDNKHAGARILLTKAFLVQNVK 322          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN6_ORYSJ (Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.454e-42
Identity = 86/177 (48.59%), Postives = 111/177 (62.71%), Query Frame = 3
Query:   21 AIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSI-EVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS 548
            A +A++W TDY +KA   P+ ++V+VGD   DH CW+RPEDM T R  YKVD  +PGSDVA ET       SIVFR  +P YS  LL  A  +FEF DKYRG Y SS+ + V   Y   SGY DELLW A WL+KA+    Y +Y+  N +   G + +I EF WD K+AG+ ++ S
Sbjct:  122 ARKAVRWATDYLMKATAKPNTVYVQVGDAFRDHSCWERPEDMDTPRTVYKVDPSHPGSDVAAETAAALAAGSIVFRDADPAYSKRLLDRAIAVFEFADKYRGPYSSSLHDAVCPCYCDFSGYKDELLWGAAWLHKASRRREYREYIKKN-EVVLGASESINEFGWDNKHAGINVLIS 297          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN4_ARATH (Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g23210 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.587e-41
Identity = 86/183 (46.99%), Postives = 116/183 (63.39%), Query Frame = 3
Query:    9 EHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKY-DSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNAD--RFGGITWAITEFSWDVKYAGVQIIAS 548
            E  +A++AIKWGTDY +KA   P V++V+VGD  +DH CW+RPEDM T R  YK+D+ + GS+VAGET       SIVF K +P YS +LL  A ++F F  KYRG Y DS  + V  +Y   +GY DELLW A WL+KA+    Y ++++ N    R G     I EF WD K+AG+ ++ S
Sbjct:  110 ELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDKDHSGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSLYQAVCPFYCDFNGYEDELLWGAAWLHKASKKRVYREFIVKNQVILRAGD---TIHEFGWDNKHAGINVLVS 289          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN10_ARATH (Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75680 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 1.754e-40
Identity = 85/179 (47.49%), Postives = 112/179 (62.57%), Query Frame = 3
Query:   21 AIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADR---FGGITWAITEFSWDVKYAGVQIIAS 548
            A ++++W TDY IKAH   +VL+++VGD   DH CW+RPEDM   R   K+D   PG++VA ET       S+VF+  +P YS  LL HA+QLF F D  RG Y  +I  V+ +Y S +GY DELLWAA WLY AT+++ YL YV ++      FG  TW    FSWD K AG Q++ S
Sbjct:  144 AKDSLRWITDYLIKAHPSDNVLYIQVGDPKVDHPCWERPEDMKEKRPLTKIDVDTPGTEVAAETAAAMASASLVFKDSDPTYSATLLKHAKQLFNFADTKRGSYSVNIPEVQKFYNS-TGYGDELLWAASWLYHATEDKTYLDYVSNHGKEFASFGNPTW----FSWDNKLAGTQVLLS 317          
The following BLAST results are available for this feature:
BLAST of CX288823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GUN3_ORYSJ4.462e-4448.04Endoglucanase 3 OS=Oryza sativa subsp. japonica GN... [more]
GUN1_ARATH5.827e-4448.88Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE... [more]
GUN18_ARATH1.695e-4350.00Endoglucanase 18 OS=Arabidopsis thaliana GN=At4g09... [more]
GUN17_ORYSJ3.777e-4350.28Endoglucanase 17 OS=Oryza sativa subsp. japonica G... [more]
GUN2_ARATH4.933e-4345.99Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g199... [more]
GUN12_ARATH4.933e-4346.70Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN17_ARATH2.448e-4247.89Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02... [more]
GUN6_ORYSJ5.454e-4248.59Endoglucanase 6 OS=Oryza sativa subsp. japonica GN... [more]
GUN4_ARATH1.587e-4146.99Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g232... [more]
GUN10_ARATH1.754e-4047.49Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75... [more]

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Properties
Property NameValue
Genbank descriptionC02004G09SK IF1 Citrus clementina cDNA clone C02004G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288823 ID=CX288823; Name=CX288823; organism=Citrus clementina; type=EST; length=616bp
GCACGAGGGAGCATCATCATGCAATTGAGGCCATCAAGTGGGGAACTGAT
TATTTCATCAAAGCTCACACTCACCCTCATGTATTATGGGTTGAGGTGGG
TGATGGAGACACCGATCACTACTGTTGGCAGCGGCCGGAAGACATGACGA
CGTCGCGGCGTGCTTACAAAGTAGACGAGAGAAACCCCGGCTCGGATGTC
GCCGGAGAGACGGCAGCGGCAATGGCGGCAGCATCAATTGTGTTTAGGAA
ACTAAACCCACATTACTCTCACCTACTATTGCACCACGCGCAACAGTTGT
TTGAGTTTGGTGACAAGTACAGAGGGAAATACGACAGTAGTATAGAGGTA
GTGAAGGGGTACTATCCGTCGGTTAGTGGATACATGGACGAGTTGTTATG
GGCGGCTGTGTGGCTATACAAGGCAACCGACAACGAGGCGTATTTGAAGT
ACGTGCTTGATAATGCCGATCGTTTTGGTGGGATCACTTGGGCCATTACT
GAATTTAGCTGGGATGTTAAGTACGCTGGCGTTCAAATCATCGCTTCAAT
GGTGAATAATCACAAGGAACACGAGCAAGTTCTTGAACGATACGGTTCGA
AAGCTGAATTTTATCT
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