CX288823

Overview
NameCX288823
Unique NameCX288823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN3_ARATH (Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 4.045e-37
Identity = 88/199 (44.22%), Postives = 116/199 (58.29%), Query Frame = 3
Query:   30 AIKWGTDYFIK-AHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSI-EVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS------MVNNHKEHEQVLERYGSK 602
            AI+W TDY +K A   P  L+V VGD + DH CW+RPEDM T R  Y V   NPGSDVA ET       S+VFRK++P YS LLL  A+++ +F  +YRG Y +S+   V  +Y S SGY DELLW A WL++AT++  Y  ++       GG    I  FSWD KYAG  ++ S        NN + ++Q  E +  K
Sbjct:  113 AIRWATDYLLKCARATPGKLYVGVGDPNGDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAALAASSMVFRKVDPKYSRLLLATAKKVMQFAIQYRGAYSNSLSSSVCPFYCSYSGYKDELLWGAAWLHRATNDPYYTNFIKSLG---GGDQPDI--FSWDNKYAGAYVLLSRRAVLNKDNNFELYKQAAENFMCK 306          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN22_ARATH (Endoglucanase 22 OS=Arabidopsis thaliana GN=At4g38990 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.011e-37
Identity = 74/177 (41.81%), Postives = 111/177 (62.71%), Query Frame = 3
Query:   30 AIKWGTDYFIKAHTH-PHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIE---VVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS 548
            A++WG++Y +K  +  P+ ++V+VG+   DH CW+RPEDM T R AY ++   P SD+AGE        SI F++ +P YS LLL +A + FE+ D +RG Y ++ E    V  +Y SV+GY DELLW A WL +AT  ++Y+KY+++N   FG  +    EF WD K  GV ++ +
Sbjct:  113 ALRWGSNYLLKTVSQLPNRIFVQVGEPTPDHQCWERPEDMDTPRTAYALEAPKPASDLAGEIAAALAAASIAFKRFDPRYSKLLLDNALRTFEYADSHRGSYTNNPETKLAVCPFYCSVNGYEDELLWGAAWLRRATGKDSYIKYLVENRQSFGSDS-NYFEFGWDNKVGGVNVLVA 288          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN18_ORYSJ (Endoglucanase 18 OS=Oryza sativa subsp. japonica GN=Os06g0715300 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.537e-36
Identity = 76/179 (42.46%), Postives = 103/179 (57.54%), Query Frame = 3
Query:   21 AIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVN 557
            AI+A+ W  DY + AH    VL+++VGD   DH CW+RPE M   R   K+  ++PGSDVA ET       S+V++ +N  YS  LL H ++LF F DK+RG Y  +   +  +Y S + Y DELLWAA WLY AT N +YL Y       F  +      FSWD K AG +++ S V+
Sbjct:  136 AIDALNWIMDYLVNAHPSDDVLYIQVGDPKADHKCWERPEKMKEKRPLTKITPKSPGSDVAAETAAAMAAASLVYKTINKTYSSSLLDHGERLFAFADKHRGSYTRTFPELSAFYNSTT-YQDELLWAASWLYHATGNHSYLAYATGKNKDFADL-GNPRYFSWDDKRAGTEVLLSRVS 312          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN14_ORYSJ (Endoglucanase 14 OS=Oryza sativa subsp. japonica GN=Os05g0129200 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.699e-35
Identity = 82/201 (40.80%), Postives = 114/201 (56.72%), Query Frame = 3
Query:   18 HAIEAIKWGTDYFIKAHTHP---HVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMV------NNHKEHEQVLERY 593
            HA++A++WG DY  +AH        L+V+VGDGD+DH CWQRPE+M T R AY V+  +PGSD+A ET       + +    + ++S  LL HA+QLFEF   +RG Y +S+     +Y S SG  DELLWAA WLY AT  E      +  A   GG+    + FSWD K+ G Q +  +        +H E +  LE++
Sbjct:  137 HALDAVRWGADYLTRAHASAGGGEALYVQVGDGDSDHSCWQRPENMDTPRTAYMVNASSPGSDIAAET------AAALASAADANFSSTLLLHAKQLFEFAKNHRGLYHNSVPSAAKFYAS-SGDEDELLWAAAWLYIATGGEEEYSAYIAGATNVGGVR---SMFSWDDKFVGAQALLVLQGKLPADGSHAEMKTNLEQF 327          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN20_ORYSJ (Endoglucanase 20 OS=Oryza sativa subsp. japonica GN=GLU15 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.786e-35
Identity = 72/174 (41.38%), Postives = 105/174 (60.34%), Query Frame = 3
Query:   30 AIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFR-KLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS 548
            AI+WG D+ ++AH  P  L+ +VGDG+ DH CW+RPEDM T R  YK+   +PGS+ A E         +  +   +  +S  LL  ++ LF+F + YRG + SS      +Y S SG+ DELLWA+ WL+KAT +  YL ++ +N     G +  + EFSWD KYAG Q++A+
Sbjct:  131 AIRWGADFLLRAHASPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKITADSPGSEAAAEASAALAAAYVALKDDGDTAFSSRLLAASRSLFDFANNYRGSFQSSCP----FYCSYSGFQDELLWASAWLFKATRDAKYLDFLTNNQ----GSSNPVNEFSWDNKYAGAQMLAA 296          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN9_ARATH (Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.944e-35
Identity = 85/195 (43.59%), Postives = 113/195 (57.95%), Query Frame = 3
Query:   33 IKWGTDYFIK-AHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKY-DSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS---MVN---NHKEHEQVLERY 593
            I+W TDY +K A   P  L+V VGD + DH CW+RPEDM T R  Y V   NPGSDVA ET       S+VFRK++  YS LLL  A+ + +F  +Y+G Y DS    V  +Y S SGY DEL+W A WL +AT+N  Y  ++       GG    I  FSWD KYAG  ++ S   ++N   N ++++Q  E +
Sbjct:  114 IRWATDYLLKCARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSASNPGSDVAAETAAALAAASMVFRKVDSKYSRLLLATAKDVMQFAIQYQGAYSDSLSSSVCPFYCSYSGYKDELMWGASWLLRATNNPYYANFIKSLG---GGDQPDI--FSWDNKYAGAYVLLSRRALLNKDSNFEQYKQAAENF 303          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN4_ORYSJ (Endoglucanase 4 OS=Oryza sativa subsp. japonica GN=GLU14 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.102e-34
Identity = 86/172 (50.00%), Postives = 103/172 (59.88%), Query Frame = 3
Query:   18 HAIEAIKWGTDYFIKAHTH-PHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKY-DSSIEVVKGYYPSVSGYMDELLWAAVWLYKAT--DNEAYLKYVLDNADRFGGITWAITEFSWDVK 521
            +A  A++WG DY +KA T  P  L+V+V D   DH CW+RPEDM T R  YKV  ++PGSDVAGET       SIVFR  +P YS  LL  AQ +F+F DKYRG Y DS   VV  +Y S S Y DELLWAA WL+ A+    + YL Y+  N    G      T FSWD K
Sbjct:  125 NARAAVRWGADYLLKAATATPDTLYVQVADPYQDHRCWERPEDMDTPRSVYKVTPQSPGSDVAGETAAALAAASIVFRVSDPSYSAKLLDAAQLVFDFADKYRGSYSDSLSSVVCPFYCSHS-YHDELLWAASWLHLASPEKKDVYLSYIGSNGHALGAEQDDFT-FSWDDK 294          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUNI_CLOTH (Endoglucanase 1 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=celI PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.454e-34
Identity = 77/201 (38.31%), Postives = 112/201 (55.72%), Query Frame = 3
Query:    9 EHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWA-ITEFSW-----DVKYAGVQIIASMVNNHKEHEQVLERY 593
            +++H +  IKW  DYFIK H    V + +VGDG  DH  W   E M   R +YKVD  +PGS V  ET       SI+F+K++  YS   L HA++LFEF D    K D       G+Y S SG+ DEL WAAVWLY AT++ +YL      +D++G      I ++ W     DV Y    ++A + N++ ++++ +ER+
Sbjct:  162 QYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIFKKVDGEYSKECLKHAKELFEFAD--TTKSDDGYTAANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDKAESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIKNDNGKYKEAIERH 360          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN11_ORYSJ (Endoglucanase 11 OS=Oryza sativa subsp. japonica GN=GLU4 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.186e-34
Identity = 77/178 (43.26%), Postives = 100/178 (56.18%), Query Frame = 3
Query:   21 AIEAIKWGTDYFIKAHTH-PHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSI-EVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS 548
            A +A++W  DY ++A T  P VL+V VGD D DH CW+RPEDM T R  Y V   +PGSDVA ET       S+  R  +P YS  LL  A+ +  F  +++GKY   +   V  YY S SGY DELLW + WL  AT N +YL Y+        G    +  FSWD K AG +++ S
Sbjct:  128 ARDAVRWAADYLLRAATATPGVLYVGVGDPDADHRCWERPEDMDTPRAVYSVSASSPGSDVAAETAAALAAASLALRAADPGYSRRLLAAARDVMAFAVRHQGKYSDHVGGDVGAYYASYSGYQDELLWGSAWLLWATRNASYLDYLASL-----GANDGVDMFSWDNKLAGARVLLS 300          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUNB_CELFI (Endoglucanase B OS=Cellulomonas fimi GN=cenB PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.140e-34
Identity = 73/192 (38.02%), Postives = 105/192 (54.69%), Query Frame = 3
Query:   33 IKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITE-----FSWDVKYAGVQIIASMVNNHKEHEQVLERY 593
            +++ +DYF+KAHT P+ L+V+VGDG+ DH  W   E MT +R ++K+    PGSDVA ET       +IV +  +P Y+  L+ HA+QL+ F D YRG Y   +     YY S SGY DEL+W A WLYKAT +  YL       D+ G    + T       +WD K  G   + +M    +++     R+
Sbjct:  130 LRFVSDYFVKAHTAPNELYVQVGDGEADHKWWGPAEVMTMARPSHKISASCPGSDVAAETAAALASSAIVLKGDDPAYAATLVSHAKQLYTFADTYRGAYSDCVTAASAYYKSWSGYQDELVWGAYWLYKATGDATYLAKAEAEYDKLGTENQSTTRSYKWTIAWDNKQFGTYALLAMETGKQKYVDDANRW 321          
The following BLAST results are available for this feature:
BLAST of CX288823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GUN3_ARATH4.045e-3744.22Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE... [more]
GUN22_ARATH9.011e-3741.81Endoglucanase 22 OS=Arabidopsis thaliana GN=At4g38... [more]
GUN18_ORYSJ1.537e-3642.46Endoglucanase 18 OS=Oryza sativa subsp. japonica G... [more]
GUN14_ORYSJ1.699e-3540.80Endoglucanase 14 OS=Oryza sativa subsp. japonica G... [more]
GUN20_ORYSJ3.786e-3541.38Endoglucanase 20 OS=Oryza sativa subsp. japonica G... [more]
GUN9_ARATH4.944e-3543.59Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE... [more]
GUN4_ORYSJ1.102e-3450.00Endoglucanase 4 OS=Oryza sativa subsp. japonica GN... [more]
GUNI_CLOTH2.454e-3438.31Endoglucanase 1 OS=Clostridium thermocellum (strai... [more]
GUN11_ORYSJ4.186e-3443.26Endoglucanase 11 OS=Oryza sativa subsp. japonica G... [more]
GUNB_CELFI7.140e-3438.02Endoglucanase B OS=Cellulomonas fimi GN=cenB PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionC02004G09SK IF1 Citrus clementina cDNA clone C02004G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288823 ID=CX288823; Name=CX288823; organism=Citrus clementina; type=EST; length=616bp
GCACGAGGGAGCATCATCATGCAATTGAGGCCATCAAGTGGGGAACTGAT
TATTTCATCAAAGCTCACACTCACCCTCATGTATTATGGGTTGAGGTGGG
TGATGGAGACACCGATCACTACTGTTGGCAGCGGCCGGAAGACATGACGA
CGTCGCGGCGTGCTTACAAAGTAGACGAGAGAAACCCCGGCTCGGATGTC
GCCGGAGAGACGGCAGCGGCAATGGCGGCAGCATCAATTGTGTTTAGGAA
ACTAAACCCACATTACTCTCACCTACTATTGCACCACGCGCAACAGTTGT
TTGAGTTTGGTGACAAGTACAGAGGGAAATACGACAGTAGTATAGAGGTA
GTGAAGGGGTACTATCCGTCGGTTAGTGGATACATGGACGAGTTGTTATG
GGCGGCTGTGTGGCTATACAAGGCAACCGACAACGAGGCGTATTTGAAGT
ACGTGCTTGATAATGCCGATCGTTTTGGTGGGATCACTTGGGCCATTACT
GAATTTAGCTGGGATGTTAAGTACGCTGGCGTTCAAATCATCGCTTCAAT
GGTGAATAATCACAAGGAACACGAGCAAGTTCTTGAACGATACGGTTCGA
AAGCTGAATTTTATCT
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