CX288830

Overview
NameCX288830
Unique NameCX288830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length556
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.945e-45
Identity = 89/186 (47.85%), Postives = 134/186 (72.04%), Query Frame = 2
Query:    2 IVYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            +VY+G + +  +VAVK L ++  Q  +EFK EVE + RV HKNLV L+GYC EG +  L+YEY+ NG+L + + G  G  S L WE R+ I++ +A+GL YLH G +P +VHRD+K++NIL+++H + K++DFGL++    E  ++++T V GT GY+ PEY  T  LNE+SDVYSFGI+++E+I+
Sbjct:  605 MVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGG-SILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIIT 789          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.945e-45
Identity = 81/185 (43.78%), Postives = 128/185 (69.19%), Query Frame = 2
Query:    2 IVYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            +VY   L++ +K+AVK L  + G  E+EFK EVE + R +H+NLV L GYC   + R+L+Y ++ NG+L+ WLH +    + L W  R+NI+ G + GL+Y+H+  EP +VHRDIKSSNIL+D ++   V+DFGL++L+    +++TT ++GT GY+ PEY    +   R DVYSFG++++E+++
Sbjct:  816 LVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLT 1000          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.540e-45
Identity = 90/184 (48.91%), Postives = 128/184 (69.57%), Query Frame = 2
Query:    5 VYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            VY   ++D    A+K +L      +R F+ E+E +G ++H+ LV L GYC     ++L+Y+Y+  G+L++ LH + G    L W+ R+NII+G AKGLSYLH    P+++HRDIKSSNIL+D +   +VSDFGLAKLL  E S+ITT V GTFGY+APEY  +G   E++DVYSFG+L++EV+S
Sbjct:  320 VYKLAMDDGKVFALKRILKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALH-ERG--EQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS 500          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.540e-45
Identity = 84/187 (44.92%), Postives = 130/187 (69.52%), Query Frame = 2
Query:    5 VYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSY---ITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            VY G+     ++AVK L  N GQ + EFK E+  + +++H+NLVRL+G+C +G  R+LVYE++ N +L+Q++  D      L W +R  +I G A+GL YLHE    +++HRD+K+SNIL+D+  NPK++DFGLAKL  S  +     T+R+ GT+GY+APEYA  G  + ++DV+SFG+L++E+I+
Sbjct:  371 VYKGVFPQGQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIF-DTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIIT 556          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 4.332e-45
Identity = 88/184 (47.83%), Postives = 122/184 (66.30%), Query Frame = 2
Query:    5 VYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            VY G+L D   +AVK L +   Q  REF  E+  I  ++H NLV+L G C EG   +LVYEY+ N +L + L G       L W  R  + +G AKGL+YLHE    K+VHRDIK++N+L+D   N K+SDFGLAKL   E+++I+TR+ GT GY+APEYA  G L +++DVYSFG++ +E++S
Sbjct:  681 VYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVS 864          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.332e-45
Identity = 91/186 (48.92%), Postives = 128/186 (68.82%), Query Frame = 2
Query:    5 VYYGLLED-NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            V+ G +E  +  VA+K L  N  Q  REF VEV  +    H NLV+L+G+CAEG  R+LVYEY+  G+LE  LH       PL W  RM I  G A+GL YLH+ + P V++RD+K SNIL+ + + PK+SDFGLAK+  S + ++++TRVMGT+GY AP+YA TG L  +SD+YSFG++++E+I+
Sbjct:  117 VFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 302          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 5.658e-45
Identity = 89/185 (48.11%), Postives = 130/185 (70.27%), Query Frame = 2
Query:    5 VYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            VY G+L    ++AVK L    GQ   EFK EV  + R++H+NLV+LLG+C E    +LVYE+V N +L+ ++  D      LTW++R  II G A+GL YLHE  + +++HRD+K+SNIL+D   NPKV+DFG+A+L    E+   T+RV+GT+GY+APEYA+ G  + +SDVYSFG++++E+IS
Sbjct:  359 VYKGILPSGQEIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIF-DEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMIS 542          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 7.390e-45
Identity = 89/185 (48.11%), Postives = 124/185 (67.03%), Query Frame = 2
Query:    5 VYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            VY G L    +VAVK L    GQ   EFK E   + +++HKNLVRLLG+C EG  ++LVYE+V N +L+ +L  D      L W  R NII G A+G+ YLH+     ++HRD+K+SNIL+D   NPK++DFG+A++ G + S   T R+ GTFGY++PEYA  G  + +SDVYSFG+L++E+IS
Sbjct:  359 VYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLF-DPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIIS 542          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 7.390e-45
Identity = 87/185 (47.03%), Postives = 131/185 (70.81%), Query Frame = 2
Query:    5 VYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            VY G+L + +++AVK L    GQ E EFK EV  + +++H NLVRLLG+  +G  ++LVYE+V+N +L+ +L  D    + L W +R NII G  +G+ YLH+    K++HRD+K+SNIL+D   NPK++DFG+A++ G + +   T RV+GTFGY++PEY + G  + +SDVYSFG+LI+E+IS
Sbjct:  353 VYKGMLMNGTEIAVKRLSKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSNKSLDYFLF-DPTKRNQLDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIIS 536          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 7.390e-45
Identity = 87/185 (47.03%), Postives = 130/185 (70.27%), Query Frame = 2
Query:    5 VYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            VY G+L + +++AVK L    GQ E EFK EV  + +++H NLVRLLG+  +G  ++LVYE+V N +L+ +L  D    + L W +R NII G  +G+ YLH+    K++HRD+K+SNIL+D   NPK++DFG+A++ G + +   T RV+GTFGY++PEY + G  + +SDVYSFG+LI+E+IS
Sbjct:  373 VYKGMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLF-DPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIIS 556          
The following BLAST results are available for this feature:
BLAST of CX288830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLK6_ARATH1.945e-4547.85Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
PSYR1_ARATH1.945e-4543.78Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
FEI1_ARATH2.540e-4548.91LRR receptor-like serine/threonine-protein kinase ... [more]
CRK29_ARATH2.540e-4544.92Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
Y5344_ARATH4.332e-4547.83Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH4.332e-4548.92Probable serine/threonine-protein kinase RLCKVII O... [more]
CRK37_ARATH5.658e-4548.11Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK35_ARATH7.390e-4548.11Putative cysteine-rich receptor-like protein kinas... [more]
CRK18_ARATH7.390e-4547.03Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
CRK17_ARATH7.390e-4547.03Cysteine-rich receptor-like protein kinase 17 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC02004H06SK IF1 Citrus clementina cDNA clone C02004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288830 ID=CX288830; Name=CX288830; organism=Citrus clementina; type=EST; length=556bp
GATTGTTTATTATGGTCTTTTGGAGGATAACTCTAAGGTTGCTGTCAAAA
ACTTGCTCAATAACAGGGGACAAGCTGAAAGGGAGTTTAAGGTTGAAGTG
GAAGCAATTGGGCGTGTTCGACACAAGAATTTAGTGAGATTGCTTGGCTA
TTGTGCTGAGGGAGCTCATAGGATGCTTGTATATGAGTATGTGAATAATG
GAAACTTGGAACAATGGCTTCATGGGGATGTAGGGCCTTGCAGTCCTCTT
ACATGGGAGATTCGAATGAATATTATCTTAGGGACAGCAAAGGGATTGAG
TTATTTGCATGAGGGACTTGAACCCAAAGTTGTTCACCGTGATATAAAAT
CAAGCAACATTTTAATTGATAAGCATTGGAACCCCAAGGTTTCAGACTTT
GGCCTTGCCAAGCTCCTTGGATCAGAGAGCAGCTACATTACAACCCGTGT
GATGGGAACATTTGGCTATGTAGCTCCTGAATATGCAAGTACGGGTATGT
TAAATGAAAGAAGTGATGTGTATAGTTTTGGAATTCTTATAATGGAAGTA
ATTTCT
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