CX288840

Overview
NameCX288840
Unique NameCX288840
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length545
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_STRR6 (Uracil phosphoribosyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=upp PE=3 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 6.143e-33
Identity = 76/165 (46.06%), Postives = 111/165 (67.27%), Query Frame = 2 
Query:    8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502
            LP    EI++P+   +V+     + +A++PILRAG+ +V+   S++PA K  H+G+ RDEETLQP  YL KLPE   +  +IFVVDPMLATGG+ + A++ +K+ G  N  IK +  V+AP  ++ L E  P + ++T  +D  +N+ G+IVPGLGDAGDR FGT
Sbjct:   48 LPLEDVEIETPI-TKTVQKQLAGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRDEETLQPVEYLVKLPEDIDQ-RQIFVVDPMLATGGSAILAVDSLKKRGASN--IKFVCLVSAPEGVKALQEAHPDVEIFTAALDERLNEHGYIVPGLGDAGDRLFGT 208
[Close]
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_LACLM (Uracil phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=upp PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.023e-33
Identity = 72/165 (43.64%), Postives = 111/165 (67.27%), Query Frame = 2 
Query:    8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502
            LP    EI++P+   +V+ I  ++ +A++PILRAG+ +V+    ++PA +  H+G+ RDEETL+P  YL KLP    +  +IF+VDPMLATGG+ + A++ +K+   + + IK +  VAAP  ++ L E  P + +YT  +D  +N+ G+IVPGLGDAGDR FGT
Sbjct:   48 LPLEDVEIETPVQKTTVKQIAGKK-LAIVPILRAGIGMVDGILKLIPAARVGHIGMYRDEETLKPVEYLVKLPADIAD-RQIFLVDPMLATGGSAILAVDSLKKRNAKAENIKFVCLVAAPEGVKALQEAHPDIEIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 210
[Close]
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_LACF3 (Uracil phosphoribosyltransferase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=upp PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.023e-33
Identity = 72/165 (43.64%), Postives = 109/165 (66.06%), Query Frame = 2 
Query:    8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502
            +P    E+++P+   + + +  ++ VA+IPILRAGL +V+  + ++PA K   +G+ RDEETL+P  Y  KLP    E  ++F+VDPMLATGG+ V A+  +K+ G + K +K    VAAP  ++ + E FP + +YT  +D  +N+ G+IVPGLGDAGDR FGT
Sbjct:   48 MPLKDVEVETPIAKTTQKELAGKK-VAIIPILRAGLGMVDGMTELIPAAKIGFIGMYRDEETLKPHEYFVKLPNDITE-RQLFIVDPMLATGGSAVMAIEALKKRGCQEKNMKFACLVAAPEGVKAVQEAFPDVDIYTAGLDERLNEDGYIVPGLGDAGDRLFGT 210
[Close]
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_STRA5 (Uracil phosphoribosyltransferase OS=Streptococcus agalactiae serotype V GN=upp PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.048e-32
Identity = 76/165 (46.06%), Postives = 109/165 (66.06%), Query Frame = 2 
Query:    8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502
            LP    EIQ+P+     + +  ++ +A++PILRAG+ +V+   S++PA K  H+G+ RDEET QP  YL KLPE   +  +IFVVDPMLATGG+ + A++ +K+ G  +  IK +  VAAP  +  L E  P + +YT  +D  +N+ G+IVPGLGDAGDR FGT
Sbjct:   48 LPLEDVEIQTPVATTVQKQLAGKK-LAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETFQPVEYLVKLPEDIDQ-RQIFVVDPMLATGGSAILAVDSLKKRGAAS--IKFVCLVAAPEGVAALQEAHPDVDIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 208
[Close]
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_STRA3 (Uracil phosphoribosyltransferase OS=Streptococcus agalactiae serotype III GN=upp PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.048e-32
Identity = 76/165 (46.06%), Postives = 109/165 (66.06%), Query Frame = 2 
Query:    8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502
            LP    EIQ+P+     + +  ++ +A++PILRAG+ +V+   S++PA K  H+G+ RDEET QP  YL KLPE   +  +IFVVDPMLATGG+ + A++ +K+ G  +  IK +  VAAP  +  L E  P + +YT  +D  +N+ G+IVPGLGDAGDR FGT
Sbjct:   48 LPLEDVEIQTPVATTVQKQLAGKK-LAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETFQPVEYLVKLPEDIDQ-RQIFVVDPMLATGGSAILAVDSLKKRGAAS--IKFVCLVAAPEGVAALQEAHPDVDIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 208
[Close]
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_STRA1 (Uracil phosphoribosyltransferase OS=Streptococcus agalactiae serotype Ia GN=upp PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.048e-32
Identity = 76/165 (46.06%), Postives = 109/165 (66.06%), Query Frame = 2 
Query:    8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502
            LP    EIQ+P+     + +  ++ +A++PILRAG+ +V+   S++PA K  H+G+ RDEET QP  YL KLPE   +  +IFVVDPMLATGG+ + A++ +K+ G  +  IK +  VAAP  +  L E  P + +YT  +D  +N+ G+IVPGLGDAGDR FGT
Sbjct:   48 LPLEDVEIQTPVATTVQKQLAGKK-LAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETFQPVEYLVKLPEDIDQ-RQIFVVDPMLATGGSAILAVDSLKKRGAAS--IKFVCLVAAPEGVAALQEAHPDVDIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 208
[Close]
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_STRPN (Uracil phosphoribosyltransferase OS=Streptococcus pneumoniae GN=upp PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.368e-32
Identity = 75/165 (45.45%), Postives = 111/165 (67.27%), Query Frame = 2 
Query:    8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502
            LP    EI++P+   +V+     + +A++PILRAG+ +V+   +++PA K  H+G+ RDEETLQP  YL KLPE   +  +IFVVDPMLATGG+ + A++ +K+ G  N  IK +  V+AP  ++ L E  P + ++T  +D  +N+ G+IVPGLGDAGDR FGT
Sbjct:   48 LPLEDVEIETPI-TKTVQKQLAGKKLAIVPILRAGIGMVDGLLNLVPAAKVGHIGMYRDEETLQPVEYLVKLPEDIDQ-RQIFVVDPMLATGGSAILAVDSLKKRGASN--IKFVCLVSAPEGVKALQEAHPDVEIFTAALDERLNEHGYIVPGLGDAGDRLFGT 208
[Close]
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_LACLS (Uracil phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=upp PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.368e-32
Identity = 72/165 (43.64%), Postives = 111/165 (67.27%), Query Frame = 2 
Query:    8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502
            LP    EI++P+   +V+ I  ++ +A++PILRAG+ +V+    ++PA +  H+G+ RDEETL+P  YL KLP    +  +IF+VDPMLATGG+ + A++ +K+   + + IK +  VAAP  ++ L E  P + +YT  +D  +N+ G+IVPGLGDAGDR FGT
Sbjct:   48 LPLEDVEIETPVQKTTVKQIAGKK-LAIVPILRAGIGMVDGILKLIPAARVGHIGMYRDEETLKPVEYLVKLPADIAD-RQIFLVDPMLATGGSAILAVDSLKKRNSKAENIKFVCLVAAPEGVKALQEAHPDIEIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 210
[Close]
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_THEPX (Uracil phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=upp PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.334e-32
Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 2 
Query:    8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502
            LP    E+++P+ VA  + I  ++ + +IPILRAGL +V+    ++PA K  H+GI RD ETL+P  Y  KLP    E   I VVDPMLATGG+  AA++ +KE G +N  IK+++ +AAP  ++ +  + P + +Y   ID  +N+ G+IVPGLGDAGDR FGT
Sbjct:   49 LPLEEIEVKTPVAVAKTKVIAGKK-LGIIPILRAGLGMVDGMLKLIPAAKVGHIGIYRDPETLKPVEYYCKLPSDIAERDLI-VVDPMLATGGSACAAIHFLKERGAQN--IKLVNLIAAPEGIEAVHRDHPEVPIYVASIDQGLNEHGYIVPGLGDAGDRLFGT 209
[Close]
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_THEP3 (Uracil phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=upp PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.334e-32
Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 2 
Query:    8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502
            LP    E+++P+ VA  + I  ++ + +IPILRAGL +V+    ++PA K  H+GI RD ETL+P  Y  KLP    E   I VVDPMLATGG+  AA++ +KE G +N  IK+++ +AAP  ++ +  + P + +Y   ID  +N+ G+IVPGLGDAGDR FGT
Sbjct:   49 LPLEEIEVKTPVAVAKTKVIAGKK-LGIIPILRAGLGMVDGMLKLIPAAKVGHIGIYRDPETLKPVEYYCKLPSDIAERDLI-VVDPMLATGGSACAAIHFLKERGAQN--IKLVNLIAAPEGIEAVHRDHPEVPIYVASIDQGLNEHGYIVPGLGDAGDRLFGT 209
The following BLAST results are available for this feature:
BLAST of CX288840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
UPP_STRR66.143e-3346.06Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_LACLM8.023e-3343.64Uracil phosphoribosyltransferase OS=Lactococcus la... [more]
UPP_LACF38.023e-3343.64Uracil phosphoribosyltransferase OS=Lactobacillus ... [more]
UPP_STRA51.048e-3246.06Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRA31.048e-3246.06Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRA11.048e-3246.06Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRPN1.368e-3245.45Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_LACLS1.368e-3243.64Uracil phosphoribosyltransferase OS=Lactococcus la... [more]
UPP_THEPX2.334e-3245.45Uracil phosphoribosyltransferase OS=Thermoanaeroba... [more]
UPP_THEP32.334e-3245.45Uracil phosphoribosyltransferase OS=Thermoanaeroba... [more]

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Properties
Property NameValue
Genbank descriptionC02006A05SK IF1 Citrus clementina cDNA clone C02006A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288840 ID=CX288840; Name=CX288840; organism=Citrus clementina; type=EST; length=545bp
GGATTGGTTGCCTACTGTCTCAGGGGAAATTCAGTCACCAATGGGTGTTG
CTTCAGTTGAATTTATTGATCCGAGGGAGCCTGTCGCGGTTATTCCAATA
TTGAGAGCAGGTCTTGTTCTTGTGGAGCATGCATCGTCAATCTTGCCCGC
AATAAAAACATATCATCTAGGTATATCCAGAGATGAAGAGACGCTTCAGC
CATCGATATACCTGAATAAATTGCCTGAAAAATTTCCAGAGGGATCACGA
ATATTTGTAGTAGATCCTATGCTGGCAACAGGTGGTACAGTTGTGGCAGC
TCTTAACCTTGTAAAGGAATGTGGGGTGGAGAACAAGCAAATTAAAGTGA
TATCTGCTGTAGCTGCTCCTCCAGCCCTCCAAAAGCTCAGCGAGAATTTC
CCTGGGCTTCATGTGTACACCGGAATTATTGATCCCACTGTCAATGACAA
AGGGTTTATAGTTCCTGGGCTTGGAGATGCAGGTGATCGTAGCTTCGGGA
CATAAAAGTTACACGAGTAATACTAGCAACAGTATGTCACCCTCA
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